RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 C1QTNF9P0C862 333 aa14.41□□□□□ -0.1
PPP4R3A-208ENST00000555462 ATP5G3P48201 142 aa14.41□□□□□ -0.1
PPP4R3A-208ENST00000555462 EDDM3AQ14507 147 aa14.41□□□□□ -0.1
PPP4R3A-208ENST00000555462 WDR61Q9GZS3 305 aaKnown RBP14.41□□□□□ -0.1
PPP4R3A-208ENST00000555462 PLSCR2Q9NRY7 297 aa14.41□□□□□ -0.1
PPP4R3A-208ENST00000555462 PTPRZ1P23471 2315 aaPredicted RBP14.41□□□□□ -0.1
PPP4R3A-208ENST00000555462 SVEP1Q4LDE5 3571 aa14.41□□□□□ -0.1
PPP4R3A-208ENST00000555462 OR2H2O95918 312 aa14.41□□□□□ -0.1
PPP4R3A-208ENST00000555462 SLC35B1P78383 322 aa14.41□□□□□ -0.1
PPP4R3A-208ENST00000555462 REC114Q7Z4M0 266 aa14.41□□□□□ -0.1
PPP4R3A-208ENST00000555462 MRGPRDQ8TDS7 321 aa14.41□□□□□ -0.1
PPP4R3A-208ENST00000555462 RAB24Q969Q5 203 aa14.41□□□□□ -0.1
PPP4R3A-208ENST00000555462 CISD1Q9NZ45 108 aaKnown RBP14.41□□□□□ -0.1
PPP4R3A-208ENST00000555462 A6NNC1 897 aa14.4□□□□□ -0.1
PPP4R3A-208ENST00000555462 S1PR2O95136 353 aa14.4□□□□□ -0.1
PPP4R3A-208ENST00000555462 FRMD6-AS1P0C7T7 363 aa14.4□□□□□ -0.1
PPP4R3A-208ENST00000555462 RPL29P47914 159 aaKnown RBP14.4□□□□□ -0.1
PPP4R3A-208ENST00000555462 HBG1P69891 147 aa14.4□□□□□ -0.1
PPP4R3A-208ENST00000555462 HBG2P69892 147 aa14.4□□□□□ -0.1
PPP4R3A-208ENST00000555462 PLGLB1Q02325 96 aa14.4□□□□□ -0.1
PPP4R3A-208ENST00000555462 CARFQ8N187 725 aa14.4□□□□□ -0.1
PPP4R3A-208ENST00000555462 KDF1Q8NAX2 398 aaPredicted RBP14.4□□□□□ -0.1
PPP4R3A-208ENST00000555462 ZNF114Q8NC26 417 aa14.4□□□□□ -0.1
PPP4R3A-208ENST00000555462 M1APQ8TC57 530 aa14.4□□□□□ -0.1
PPP4R3A-208ENST00000555462 OR2J1Q9GZK6 312 aa14.4□□□□□ -0.1
PPP4R3A-208ENST00000555462 TIPARPQ7Z3E1 657 aaKnown RBP14.4□□□□□ -0.1
PPP4R3A-208ENST00000555462 SPEM1Q8N4L4 309 aa14.4□□□□□ -0.1
PPP4R3A-208ENST00000555462 RAB40CQ96S21 281 aa14.4□□□□□ -0.1
PPP4R3A-208ENST00000555462 A0A1B0GW64 132 aa14.39□□□□□ -0.11
PPP4R3A-208ENST00000555462 NDUFB4O95168 129 aa14.39□□□□□ -0.11
PPP4R3A-208ENST00000555462 PLP2Q04941 152 aa14.39□□□□□ -0.11
PPP4R3A-208ENST00000555462 TDRG1Q3Y452 100 aa14.39□□□□□ -0.11
PPP4R3A-208ENST00000555462 PITPNC1Q9UKF7 332 aa14.39□□□□□ -0.11
PPP4R3A-208ENST00000555462 C17orf98A8MV24 154 aa14.39□□□□□ -0.11
PPP4R3A-208ENST00000555462 K7ESF4 209 aa14.39□□□□□ -0.11
PPP4R3A-208ENST00000555462 GYPAP02724 150 aa14.39□□□□□ -0.11
PPP4R3A-208ENST00000555462 PSMB3P49720 205 aa14.39□□□□□ -0.11
PPP4R3A-208ENST00000555462 DUSP23Q9BVJ7 150 aa14.39□□□□□ -0.11
PPP4R3A-208ENST00000555462 SF3B5Q9BWJ5 86 aaKnown RBP14.39□□□□□ -0.11
PPP4R3A-208ENST00000555462 CACNA1BQ00975 2339 aa14.39□□□□□ -0.11
PPP4R3A-208ENST00000555462 MAS1LP35410 378 aa14.39□□□□□ -0.11
PPP4R3A-208ENST00000555462 GABRA2P47869 451 aa14.39□□□□□ -0.11
PPP4R3A-208ENST00000555462 TMEM41BQ5BJD5 291 aa14.39□□□□□ -0.11
PPP4R3A-208ENST00000555462 ATP1A1-AS1Q5TC04 95 aa14.39□□□□□ -0.11
PPP4R3A-208ENST00000555462 PPP1R32Q7Z5V6 425 aa14.39□□□□□ -0.11
PPP4R3A-208ENST00000555462 HINT2Q9BX68 163 aa14.39□□□□□ -0.11
PPP4R3A-208ENST00000555462 TMEM9BQ9NQ34 198 aa14.39□□□□□ -0.11
PPP4R3A-208ENST00000555462 SIT1Q9Y3P8 196 aa14.39□□□□□ -0.11
PPP4R3A-208ENST00000555462 SLC31A2O15432 143 aa14.38□□□□□ -0.11
PPP4R3A-208ENST00000555462 OPN1MWP04001 364 aa14.38□□□□□ -0.11
PPP4R3A-208ENST00000555462 OPN1MW2P0DN77 364 aa14.38□□□□□ -0.11
PPP4R3A-208ENST00000555462 OPN1MW3P0DN78 364 aa14.38□□□□□ -0.11
PPP4R3A-208ENST00000555462 NPPCP23582 126 aa14.38□□□□□ -0.11
PPP4R3A-208ENST00000555462 FOXO1Q12778 655 aa14.38□□□□□ -0.11
PPP4R3A-208ENST00000555462 LRRC75BQ2VPJ9 315 aa14.38□□□□□ -0.11
PPP4R3A-208ENST00000555462 MRGPRGQ86SM5 289 aa14.38□□□□□ -0.11
PPP4R3A-208ENST00000555462 OR51I2Q9H344 312 aa14.38□□□□□ -0.11
PPP4R3A-208ENST00000555462 IL36GQ9NZH8 169 aa14.38□□□□□ -0.11
PPP4R3A-208ENST00000555462 TCAPO15273 167 aa14.38□□□□□ -0.11
PPP4R3A-208ENST00000555462 ST8SIA5O15466 376 aa14.38□□□□□ -0.11
PPP4R3A-208ENST00000555462 PSPNO60542 156 aa14.38□□□□□ -0.11
PPP4R3A-208ENST00000555462 FKBP2P26885 142 aaKnown RBP14.38□□□□□ -0.11
PPP4R3A-208ENST00000555462 SSTR5P35346 364 aa14.38□□□□□ -0.11
PPP4R3A-208ENST00000555462 NUBP1P53384 320 aa14.38□□□□□ -0.11
PPP4R3A-208ENST00000555462 ZNF705AQ6ZN79 300 aaPredicted RBP14.38□□□□□ -0.11
PPP4R3A-208ENST00000555462 SSMEM1Q8WWF3 244 aa14.38□□□□□ -0.11
PPP4R3A-208ENST00000555462 APH1AQ96BI3 265 aa14.38□□□□□ -0.11
PPP4R3A-208ENST00000555462 LYZL6O75951 148 aa14.37□□□□□ -0.11
PPP4R3A-208ENST00000555462 TEX38Q6PEX7 206 aa14.37□□□□□ -0.11
PPP4R3A-208ENST00000555462 WDR86Q86TI4 376 aa14.37□□□□□ -0.11
PPP4R3A-208ENST00000555462 TMEM183AQ8IXX5 376 aa14.37□□□□□ -0.11
PPP4R3A-208ENST00000555462 APOBEC3DQ96AK3 386 aaPredicted RBP14.37□□□□□ -0.11
PPP4R3A-208ENST00000555462 NAT8Q9UHE5 227 aa14.37□□□□□ -0.11
PPP4R3A-208ENST00000555462 TCFL5Q9UL49 500 aa14.37□□□□□ -0.11
PPP4R3A-208ENST00000555462 IL18BPO95998 194 aa14.37□□□□□ -0.11
PPP4R3A-208ENST00000555462 C21orf62-AS1Q17RA5 79 aa14.37□□□□□ -0.11
PPP4R3A-208ENST00000555462 LEAP2Q969E1 77 aa14.37□□□□□ -0.11
PPP4R3A-208ENST00000555462 SPTA1P02549 2419 aa14.37□□□□□ -0.11
PPP4R3A-208ENST00000555462 WISP2O76076 250 aa14.37□□□□□ -0.11
PPP4R3A-208ENST00000555462 PFN1P07737 140 aaKnown RBP14.37□□□□□ -0.11
PPP4R3A-208ENST00000555462 MDP1Q86V88 176 aa14.37□□□□□ -0.11
PPP4R3A-208ENST00000555462 OR5A2Q8NGI9 324 aa14.37□□□□□ -0.11
PPP4R3A-208ENST00000555462 DDA1Q9BW61 102 aa14.37□□□□□ -0.11
PPP4R3A-208ENST00000555462 ELOA3CA0A087WX78 387 aaPredicted RBP14.36□□□□□ -0.11
PPP4R3A-208ENST00000555462 ODAMA1E959 279 aa14.36□□□□□ -0.11
PPP4R3A-208ENST00000555462 C11orf94C9JXX5 98 aa14.36□□□□□ -0.11
PPP4R3A-208ENST00000555462 AGFG2O95081 481 aa14.36□□□□□ -0.11
PPP4R3A-208ENST00000555462 TRIM61Q5EBN2 209 aa14.36□□□□□ -0.11
PPP4R3A-208ENST00000555462 Q6ZSR3 168 aa14.36□□□□□ -0.11
PPP4R3A-208ENST00000555462 ZNF709Q8N972 641 aa14.36□□□□□ -0.11
PPP4R3A-208ENST00000555462 FAM103A1Q9BTL3 118 aaKnown RBP14.36□□□□□ -0.11
PPP4R3A-208ENST00000555462 SMDT1Q9H4I9 107 aa14.36□□□□□ -0.11
PPP4R3A-208ENST00000555462 METRNQ9UJH8 293 aa14.36□□□□□ -0.11
PPP4R3A-208ENST00000555462 YLPM1P49750 1951 aaKnown RBP14.36□□□□□ -0.11
PPP4R3A-208ENST00000555462 LOC102723996A0A087X1L8 192 aa14.36□□□□□ -0.11
PPP4R3A-208ENST00000555462 SLC17A3O00476 420 aa14.36□□□□□ -0.11
PPP4R3A-208ENST00000555462 TOX3O15405 576 aaPredicted RBP14.36□□□□□ -0.11
PPP4R3A-208ENST00000555462 GCH1P30793 250 aa14.36□□□□□ -0.11
PPP4R3A-208ENST00000555462 PAX5Q02548 391 aa14.36□□□□□ -0.11
PPP4R3A-208ENST00000555462 SCCPDHQ8NBX0 429 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 531.9 ms