RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 PRRC2CQ9Y520 2896 aaKnown RBP14.87□□□□□ -0.03
RAB40C-205ENST00000539661 GPR179Q6PRD1 2367 aa14.87□□□□□ -0.03
RAB40C-205ENST00000539661 CACNA1EQ15878 2313 aa14.87□□□□□ -0.03
RAB40C-205ENST00000539661 NPPCP23582 126 aa14.87□□□□□ -0.03
RAB40C-205ENST00000539661 VWC2Q2TAL6 325 aa14.87□□□□□ -0.03
RAB40C-205ENST00000539661 ZNF705AQ6ZN79 300 aaPredicted RBP14.87□□□□□ -0.03
RAB40C-205ENST00000539661 ZNF709Q8N972 641 aa14.87□□□□□ -0.03
RAB40C-205ENST00000539661 CRIM1Q9NZV1 1036 aa14.87□□□□□ -0.03
RAB40C-205ENST00000539661 CXCL13O43927 109 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 YPEL1O60688 119 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 SYNGR4O95473 234 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 ZNF16P17020 682 aaPredicted RBP14.86□□□□□ -0.03
RAB40C-205ENST00000539661 TEX43Q6ZNM6 134 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 FAM58AQ8N1B3 248 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 CMTM2Q8TAZ6 248 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 APOBEC3DQ96AK3 386 aaPredicted RBP14.86□□□□□ -0.03
RAB40C-205ENST00000539661 THOC3Q96J01 351 aaKnown RBP14.86□□□□□ -0.03
RAB40C-205ENST00000539661 YPEL2Q96QA6 119 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 DIRC2Q96SL1 478 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 PMS2P5A8MQ11 134 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 C17orf112F2Z3M2 114 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 F6UZH7 168 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 ESDP10768 282 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 GCH1P30793 250 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 SELENOTP62341 195 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 TLE1Q04724 770 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 OR10P1Q8NGE3 313 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 TMEM45BQ96B21 275 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 WFIKKN1Q96NZ8 548 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 NPCDR1Q9BY65 106 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 KCNIP2Q9NS61 270 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 ELOVL5Q9NYP7 299 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 KCNS2Q9ULS6 477 aa14.86□□□□□ -0.03
RAB40C-205ENST00000539661 RBM7Q9Y580 266 aaKnown RBP14.86□□□□□ -0.03
RAB40C-205ENST00000539661 C1QTNF9BB2RNN3 333 aa14.85□□□□□ -0.03
RAB40C-205ENST00000539661 TPPP2P59282 170 aa14.85□□□□□ -0.03
RAB40C-205ENST00000539661 NUFIP2Q7Z417 695 aaKnown RBP14.85□□□□□ -0.03
RAB40C-205ENST00000539661 ZFHX4Q86UP3 3567 aa14.85□□□□□ -0.03
RAB40C-205ENST00000539661 SOX15O60248 233 aa14.85□□□□□ -0.03
RAB40C-205ENST00000539661 SS18L1O75177 396 aaPredicted RBP14.85□□□□□ -0.03
RAB40C-205ENST00000539661 CYB5R2Q6BCY4 276 aa14.85□□□□□ -0.03
RAB40C-205ENST00000539661 OR5P3Q8WZ94 311 aa14.85□□□□□ -0.03
RAB40C-205ENST00000539661 TXNDC17Q9BRA2 123 aa14.85□□□□□ -0.03
RAB40C-205ENST00000539661 IL17BQ9UHF5 180 aa14.85□□□□□ -0.03
RAB40C-205ENST00000539661 IGHV5-10-1A0A0J9YXX1 117 aa14.84□□□□□ -0.03
RAB40C-205ENST00000539661 OR5B21A6NL26 309 aa14.84□□□□□ -0.03
RAB40C-205ENST00000539661 GDF9O60383 454 aa14.84□□□□□ -0.03
RAB40C-205ENST00000539661 COX6A1P12074 109 aa14.84□□□□□ -0.03
RAB40C-205ENST00000539661 MPLP40238 635 aa14.84□□□□□ -0.03
RAB40C-205ENST00000539661 CDC34P49427 236 aaPredicted RBP14.84□□□□□ -0.03
RAB40C-205ENST00000539661 OR10D3Q8NH80 312 aa14.84□□□□□ -0.03
RAB40C-205ENST00000539661 RAB1CQ92928 201 aa14.84□□□□□ -0.03
RAB40C-205ENST00000539661 TRAV9-1A0A075B6T8 112 aa14.84□□□□□ -0.03
RAB40C-205ENST00000539661 IFNL4K9M1U5 179 aa14.84□□□□□ -0.03
RAB40C-205ENST00000539661 NUPR1O60356 82 aa14.84□□□□□ -0.03
RAB40C-205ENST00000539661 P0C879 139 aa14.84□□□□□ -0.03
RAB40C-205ENST00000539661 GNB1P62873 340 aa14.84□□□□□ -0.03
RAB40C-205ENST00000539661 TMEM183BQ1AE95 376 aa14.84□□□□□ -0.03
RAB40C-205ENST00000539661 YRDCQ86U90 279 aaKnown RBP14.84□□□□□ -0.03
RAB40C-205ENST00000539661 RPS19BP1Q86WX3 136 aaKnown RBP14.84□□□□□ -0.03
RAB40C-205ENST00000539661 DRAM1Q8N682 238 aa14.84□□□□□ -0.03
RAB40C-205ENST00000539661 ZBTB34Q8NCN2 500 aa14.84□□□□□ -0.03
RAB40C-205ENST00000539661 SDSLQ96GA7 329 aa14.84□□□□□ -0.03
RAB40C-205ENST00000539661 CIB3Q96Q77 187 aaPredicted RBP14.84□□□□□ -0.03
RAB40C-205ENST00000539661 PKIBQ9C010 78 aa14.84□□□□□ -0.03
RAB40C-205ENST00000539661 AKIRIN1Q9H9L7 192 aaPredicted RBP14.84□□□□□ -0.03
RAB40C-205ENST00000539661 PARD6AQ9NPB6 346 aa14.84□□□□□ -0.03
RAB40C-205ENST00000539661 SDK2Q58EX2 2172 aa14.84□□□□□ -0.03
RAB40C-205ENST00000539661 WDR1O75083 606 aa14.83□□□□□ -0.03
RAB40C-205ENST00000539661 OR5T1Q8NG75 326 aa14.83□□□□□ -0.03
RAB40C-205ENST00000539661 SFRP2Q96HF1 295 aa14.83□□□□□ -0.03
RAB40C-205ENST00000539661 OR51B6Q9H340 312 aa14.83□□□□□ -0.03
RAB40C-205ENST00000539661 ZNF552Q9H707 407 aaPredicted RBP14.83□□□□□ -0.03
RAB40C-205ENST00000539661 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.83□□□□□ -0.03
RAB40C-205ENST00000539661 RYDENQ9NUL5 291 aaKnown RBP14.83□□□□□ -0.03
RAB40C-205ENST00000539661 MPC1Q9Y5U8 109 aa14.83□□□□□ -0.03
RAB40C-205ENST00000539661 LRRC30A6NM36 301 aa14.83□□□□□ -0.04
RAB40C-205ENST00000539661 EPHA8P29322 1005 aaPredicted RBP14.83□□□□□ -0.04
RAB40C-205ENST00000539661 ADMP35318 185 aa14.83□□□□□ -0.04
RAB40C-205ENST00000539661 WNT5AP41221 380 aa14.83□□□□□ -0.04
RAB40C-205ENST00000539661 MLF1P58340 268 aa14.83□□□□□ -0.04
RAB40C-205ENST00000539661 PMP22Q01453 160 aa14.83□□□□□ -0.04
RAB40C-205ENST00000539661 CST9LP1Q5W188 147 aa14.83□□□□□ -0.04
RAB40C-205ENST00000539661 TOMM20LQ6UXN7 152 aa14.83□□□□□ -0.04
RAB40C-205ENST00000539661 SGMS2Q8NHU3 365 aa14.83□□□□□ -0.04
RAB40C-205ENST00000539661 GMPPAQ96IJ6 420 aaPredicted RBP14.83□□□□□ -0.04
RAB40C-205ENST00000539661 SGCZQ96LD1 299 aa14.83□□□□□ -0.04
RAB40C-205ENST00000539661 LINC00470Q9BZP3 86 aa14.83□□□□□ -0.04
RAB40C-205ENST00000539661 MRPS18CQ9Y3D5 142 aaKnown RBP14.83□□□□□ -0.04
RAB40C-205ENST00000539661 CEP192Q8TEP8 1941 aa14.83□□□□□ -0.04
RAB40C-205ENST00000539661 SPENQ96T58 3664 aaKnown RBP14.82□□□□□ -0.04
RAB40C-205ENST00000539661 IRF2P14316 349 aa14.82□□□□□ -0.04
RAB40C-205ENST00000539661 CCNOP22674 350 aa14.82□□□□□ -0.04
RAB40C-205ENST00000539661 TNFSF10P50591 281 aa14.82□□□□□ -0.04
RAB40C-205ENST00000539661 GNG3P63215 75 aa14.82□□□□□ -0.04
RAB40C-205ENST00000539661 TFF3Q07654 80 aa14.82□□□□□ -0.04
RAB40C-205ENST00000539661 TPTE2P1Q5T6R2 138 aa14.82□□□□□ -0.04
RAB40C-205ENST00000539661 Q6P435 159 aa14.82□□□□□ -0.04
RAB40C-205ENST00000539661 ZNF488Q96MN9 340 aa14.82□□□□□ -0.04
RAB40C-205ENST00000539661 MDFIC2A0A1B0GVS7 189 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms