RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 A6NDN8 102 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 OR51F1A6NGY5 319 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 MSGN1A6NI15 193 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 FOXI3A8MTJ6 420 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-216ENST00000523088 F8VVB4 439 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 F8VWA3 439 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 TGFBR3LH3BV60 316 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 H7C1C5 153 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 NME4O00746 187 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 PHF1O43189 567 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-216ENST00000523088 DHHO43323 396 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 SYNGR1O43759 233 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 PRKNO60260 465 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-216ENST00000523088 OR1I1O60431 355 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 YPEL1O60688 119 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 KBTBD11O94819 623 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 CGAP01215 116 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 HPNP05981 417 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 FCGR3AP08637 254 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 FAM106CPP0CH98 169 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 LIMS3P0CW19 117 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 LIMS4P0CW20 117 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 PVRP15151 417 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 RPL12P30050 165 aaKnown RBP6.4□□□□□ -1.38
HDAC3-216ENST00000523088 GLRXP35754 106 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 CTRLP40313 264 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 ATP4BP51164 291 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 RND2P52198 227 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 HSPE1P61604 102 aaKnown RBP6.4□□□□□ -1.38
HDAC3-216ENST00000523088 RAE1P78406 368 aaKnown RBP6.4□□□□□ -1.38
HDAC3-216ENST00000523088 ELOBQ15370 118 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 SIX1Q15475 284 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-216ENST00000523088 C3AR1Q16581 482 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 ACOT6Q3I5F7 207 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-216ENST00000523088 FAM106AQ4KMX7 169 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 PRR30Q53SZ7 412 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-216ENST00000523088 CD164L2Q6UWJ8 174 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 GLIPR1L1Q6UWM5 242 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 MRGPREQ86SM8 312 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF595Q8IYB9 648 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 OR2L13Q8N349 312 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 FLVCR1-AS1Q8TAF5 88 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 TMED6Q8WW62 240 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 OR5P2Q8WZ92 322 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 FRZBQ92765 325 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 MS4A6EQ96DS6 147 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 DERL3Q96Q80 235 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 YPEL2Q96QA6 119 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 MLST8Q9BVC4 326 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 GABARAPL1Q9H0R8 117 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 FAM234AQ9H0X4 552 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 SLC2A6Q9UGQ3 507 aa6.4□□□□□ -1.38
HDAC3-216ENST00000523088 SETXQ7Z333 2677 aaKnown RBP6.39□□□□□ -1.39
HDAC3-216ENST00000523088 TCRBV5S2A0A599 114 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 ZNF705FA8MVS1 300 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-216ENST00000523088 H3BMH7 237 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 SIRPB1O00241 398 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 TAX1BP3O14907 124 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 CREBL2O60519 120 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-216ENST00000523088 C1orf105O95561 183 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 GAPDHP04406 335 aaKnown RBP6.39□□□□□ -1.39
HDAC3-216ENST00000523088 SP1P08047 785 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 ZNF705DP0CH99 300 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-216ENST00000523088 ZNF705BP0CI00 300 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-216ENST00000523088 ZNF728P0DKX0 622 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 IGLC2P0DOY2 106 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 IGLC3P0DOY3 106 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 TPT1P13693 172 aaKnown RBP6.39□□□□□ -1.39
HDAC3-216ENST00000523088 CDK2P24941 298 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 BTCP35070 178 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 P2RY1P47900 373 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 GLRBP48167 497 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 MEOX1P50221 254 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 UCP3P55916 312 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 RPS18P62269 152 aaKnown RBP6.39□□□□□ -1.39
HDAC3-216ENST00000523088 ARG2P78540 354 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 ROM1Q03395 351 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 PIGFQ07326 219 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 LINC01620Q4KN68 170 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 OR10J3Q5JRS4 329 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 LY6G6FQ5SQ64 297 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 IGFL3Q6UXB1 125 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 ADAMTSL5Q6ZMM2 481 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 FAM214BQ7L5A3 538 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 MAVSQ7Z434 540 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 LRP11Q86VZ4 500 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 TGIF2LYQ8IUE0 185 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 RNF175Q8N4F7 328 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 ZFP41Q8N8Y5 198 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 SLC25A40Q8TBP6 338 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 OR5P3Q8WZ94 311 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 MBD6Q96DN6 1003 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 ZNF681Q96N22 645 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 GATA5Q9BWX5 397 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-216ENST00000523088 WDR61Q9GZS3 305 aaKnown RBP6.39□□□□□ -1.39
HDAC3-216ENST00000523088 RERGLQ9H628 205 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 HES4Q9HCC6 221 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 FAM60AQ9NP50 221 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 KCNJ16Q9NPI9 418 aa6.39□□□□□ -1.39
HDAC3-216ENST00000523088 PARP11Q9NR21 331 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms