RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 FSTL3O95633 263 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 CRYZL1O95825 349 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 APOC1P02654 83 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 LGALS1P09382 135 aaKnown RBP2.86□□□□□ -1.95
SKP1-209ENST00000522552 SEC11BP0C7V7 166 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 CFC1P0CG37 223 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 PSG2P11465 335 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 CRISP3P54108 245 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 DEFA3P59666 94 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 CKS1BP61024 79 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 TIMM10P62072 90 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 FABP9Q0Z7S8 132 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 RNF212Q495C1 297 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 RPL13AP3Q6NVV1 102 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 ZNF440Q8IYI8 595 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 CEND1Q8N111 149 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 OR5H2Q8NGV7 314 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 C15orf40Q8WUR7 153 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 CXorf21Q9HAI6 301 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 DHCR7Q9UBM7 475 aaKnown RBP2.86□□□□□ -1.95
SKP1-209ENST00000522552 VIRMAQ69YN4 1812 aaKnown RBP2.86□□□□□ -1.95
SKP1-209ENST00000522552 MYO5BQ9ULV0 1848 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 ARAP1Q96P48 1450 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 IGHV3-72A0A0B4J1Y9 119 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 IGHV1OR15-9A0A0B4J2B8 117 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 SIGLEC16A6NMB1 481 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 C9JQL5 133 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 TMX2-CTNND1H3BSU7 103 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 PFDN1O60925 122 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 DEDDO75618 318 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 OR2J2O76002 312 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 ZNF682O95780 498 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 PDYNP01213 254 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 IGHV3-11P01762 117 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 IGHV3-13P01766 116 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 HLA-DQB2P05538 268 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 BPGMP07738 259 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 P0C879 139 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 S100A2P29034 98 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 GABRA3P34903 492 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 ZNF83P51522 516 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 BAMBIQ13145 260 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 Q1RN00 199 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 IBA57Q5T440 356 aaKnown RBP2.85□□□□□ -1.95
SKP1-209ENST00000522552 UNQ9165/PRO28630Q6UXU0 137 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 OR4K5Q8NGD3 323 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 GPR146Q96CH1 333 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 ABHD14BQ96IU4 210 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 LYSMD1Q96S90 227 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 RPS6KB2Q9UBS0 482 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 TAC3Q9UHF0 121 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 SOGA1O94964 1423 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 LOXHD1Q8IVV2 1947 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 SVILO95425 2214 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 RTL1A6NKG5 1358 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 ATG2BQ96BY7 2078 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 hCG_1818297A0A087WSY0 165 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 A0A087WX48 190 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 IGHV3-66A0A0C4DH42 116 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 ARL5CA6NH57 179 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 A8MT66 165 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 TRAF3IP2O43734 574 aaPredicted RBP2.85□□□□□ -1.95
SKP1-209ENST00000522552 EIF1BO60739 113 aaKnown RBP2.85□□□□□ -1.95
SKP1-209ENST00000522552 NDUFC2O95298 119 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 APOMO95445 188 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 LTAP01374 205 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 IGKV1-39P01597 117 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 OPN1SWP03999 348 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 IGKV1D-39P04432 117 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 C8GP07360 202 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 GIG44P09565 113 aaPredicted RBP2.85□□□□□ -1.95
SKP1-209ENST00000522552 EIF1P41567 113 aaKnown RBP2.85□□□□□ -1.95
SKP1-209ENST00000522552 TNFAIP6P98066 277 aaPredicted RBP2.85□□□□□ -1.95
SKP1-209ENST00000522552 KIAA0040Q15053 153 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 ZFP1Q6P2D0 407 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 IL34Q6ZMJ4 242 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 TCF24Q7RTU0 167 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 SGPP2Q8IWX5 399 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 C1orf174Q8IYL3 243 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 EXOC3-AS1Q8N2X6 119 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 ZNF664Q8N3J9 261 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 SUMF2Q8NBJ7 301 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 CAPZA3Q96KX2 299 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 CCDC115Q96NT0 180 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 DERL3Q96Q80 235 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 SERPINI1Q99574 410 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 CCDC32Q9BV29 185 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 PCNX3Q9H6A9 2034 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 TPT1P8Q9HAU6 139 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 C8orf17Q9NRJ1 99 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 ZNF492Q9P255 531 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 NUFIP1Q9UHK0 495 aaKnown RBP2.85□□□□□ -1.95
SKP1-209ENST00000522552 MOB4Q9Y3A3 225 aa2.85□□□□□ -1.95
SKP1-209ENST00000522552 DENND4BO75064 1496 aaPredicted RBP2.84□□□□□ -1.95
SKP1-209ENST00000522552 PCSK5Q92824 1860 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 IGHV1-45A0A0A0MS14 117 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 IGKV1-6A0A0C4DH72 117 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 SRRM5B3KS81 715 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 K7EP13 123 aa2.84□□□□□ -1.95
SKP1-209ENST00000522552 DEGS1O15121 323 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms