RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 CBY1Q9Y3M2 126 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 LRP5LA4QPB2 252 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 RNF212BA8MTL3 300 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 KIAA1324LA8MWY0 1029 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 ZG16O60844 167 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 CRISP2P16562 243 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 ATP5G3P48201 142 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 GBGT1Q8N5D6 347 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 DTD1Q8TEA8 209 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 ZDHHC16Q969W1 377 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 TXN2Q99757 166 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 DERL1Q9BUN8 251 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 HINT2Q9BX68 163 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 TPRP12270 2363 aaKnown RBP10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 IGHV5-10-1A0A0J9YXX1 117 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 A0A1W2PQM1 296 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 CBLN1P23435 193 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 SRP14P37108 136 aaKnown RBP10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 GNG3P63215 75 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 RHBDL1O75783 438 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 RFPL3SP0C7P2 107 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 CATR1Q13166 79 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 PCOLCEQ15113 449 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 GCSAMLQ5JQS6 135 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 ZNF324BQ6AW86 544 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 RFESDQ8TAC1 157 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 SEMA5BQ9P283 1151 aa10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 POLR3KQ9Y2Y1 108 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC9-208ENST00000520857 IGKV1-39P01597 117 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 IGKV1D-39P04432 117 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 TFPI2P48307 235 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 ALKBH2Q6NS38 261 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 PCSK4Q6UW60 755 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 FOXL2NBQ6ZUU3 175 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 C12orf49Q9H741 205 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 FAM90A10PA6NDY2 464 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 FAM90A18PA6NE21 464 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 FAM90A16PA6NEW6 464 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 FAM90A20PA6NIJ5 464 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 FAM90A8PA6NJQ4 464 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 FAM90A7PA6NKC0 464 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 FAM90A22PA8MWA6 464 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 FAM90A12PA8MX19 464 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 FAM90A5PA8MXJ8 464 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 FAM90A23PA8MXZ1 464 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 FCN1O00602 326 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 FAM90A15PP0C7V4 464 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 FAM90A13PP0C7W8 464 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 FAM90A14PP0C7W9 464 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 FAM90A24PP0C7X0 464 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 FOLR3P41439 243 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 TMEM183BQ1AE95 376 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 ACTL10Q5JWF8 245 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 DMRTA1Q5VZB9 504 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 DRAM1Q8N682 238 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 LSM10Q969L4 123 aaKnown RBP10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 HEYLQ9NQ87 328 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 LRP4O75096 1905 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 DEFB108AA8MXU0 73 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 TCF21O43680 179 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 IL18BPO95998 194 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 PCP4P48539 62 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 RAB30Q15771 203 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 SIGLECL1Q8N7X8 197 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 TMEM208Q9BTX3 173 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 GCM1Q9NP62 436 aa10.87□□□□□ -0.67
TRAPPC9-208ENST00000520857 IGHV3-43A0A0B4J1X8 118 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 IGHV3-43DP0DP04 118 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 RAB4AP20338 218 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 PMCHP20382 165 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 GABRA2P47869 451 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 TDGF1P3P51864 188 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 CXorf67Q86X51 503 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 TRAV24A0A0B4J272 114 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 IRF2P14316 349 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 SRD5A2P31213 254 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 TNFSF10P50591 281 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 FOXG1P55316 489 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 C1orf194Q5T5A4 169 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 CADM4Q8NFZ8 388 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 OR5A2Q8NGI9 324 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 SERTAD4Q9NUC0 356 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 MRPS17Q9Y2R5 130 aaKnown RBP10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 FAM166BA8MTA8 275 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 A8MXE2 369 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 RAMP3O60896 148 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 NPSP0C0P6 89 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 CCL4P13236 92 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 NTF3P20783 257 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 IER3P46695 156 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 SLC35B1P78383 322 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 OR10G8Q8NGN5 311 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 KCNE4Q8WWG9 221 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 ZCCHC14Q8WYQ9 949 aaKnown RBP10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 DCAF16Q9NXF7 216 aa10.86□□□□□ -0.67
TRAPPC9-208ENST00000520857 ZDBF2Q9HCK1 2354 aa10.85□□□□□ -0.67
TRAPPC9-208ENST00000520857 CEBPDP49716 269 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC9-208ENST00000520857 TUSC5Q8IXB3 177 aa10.85□□□□□ -0.67
TRAPPC9-208ENST00000520857 ZNF295-AS1Q8N0V1 137 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms