RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 GGCTO75223 188 aaKnown RBP14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 CTSBP07858 339 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 NSUN5P2Q63ZY6 315 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 ZNF343Q6P1L6 599 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 SGMS2Q8NHU3 365 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 MRPL37Q9BZE1 423 aaKnown RBP14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 DCAF16Q9NXF7 216 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 LBHQ53QV2 105 aaPredicted RBP14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 ZNF826PQ6ZT77 177 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 AURKAIP1Q9NWT8 199 aaPredicted RBP14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 IGHV3-21A0A0B4J1V1 117 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 ZNF735P0CB33 412 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 MMD2Q8IY49 270 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 FGFRL1Q8N441 504 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 RABAC1Q9UI14 185 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 RPL8P62917 257 aaKnown RBP14.22□□□□□ -0.13
PCDHA1-203ENST00000504120 SELENOHQ8IZQ5 122 aaKnown RBP14.22□□□□□ -0.13
PCDHA1-203ENST00000504120 ATG2BQ96BY7 2078 aa14.22□□□□□ -0.13
PCDHA1-203ENST00000504120 ODAMA1E959 279 aa14.22□□□□□ -0.13
PCDHA1-203ENST00000504120 J3KRW8 73 aa14.22□□□□□ -0.13
PCDHA1-203ENST00000504120 CXorf66Q5JRM2 361 aaPredicted RBP14.22□□□□□ -0.13
PCDHA1-203ENST00000504120 C10orf128Q5T292 105 aa14.22□□□□□ -0.13
PCDHA1-203ENST00000504120 GPR146Q96CH1 333 aa14.22□□□□□ -0.13
PCDHA1-203ENST00000504120 SRXN1Q9BYN0 137 aa14.22□□□□□ -0.13
PCDHA1-203ENST00000504120 DLL1O00548 723 aa14.22□□□□□ -0.13
PCDHA1-203ENST00000504120 SCGB1D4Q6XE38 83 aa14.22□□□□□ -0.13
PCDHA1-203ENST00000504120 SPSB2Q99619 263 aa14.22□□□□□ -0.13
PCDHA1-203ENST00000504120 ZNF552Q9H707 407 aaPredicted RBP14.22□□□□□ -0.13
PCDHA1-203ENST00000504120 IGKV3-7A0A075B6H7 116 aa14.22□□□□□ -0.13
PCDHA1-203ENST00000504120 LOC390937A0A1W2PQ73 354 aa14.22□□□□□ -0.13
PCDHA1-203ENST00000504120 PRNTQ86SH4 94 aa14.22□□□□□ -0.13
PCDHA1-203ENST00000504120 FAM216AQ8WUB2 273 aa14.22□□□□□ -0.13
PCDHA1-203ENST00000504120 TAF15Q92804 592 aaKnown RBP eCLIP14.22□□□□□ -0.13
PCDHA1-203ENST00000504120 SOSTQ9BQB4 213 aa14.22□□□□□ -0.13
PCDHA1-203ENST00000504120 WNT5BQ9H1J7 359 aa14.22□□□□□ -0.13
PCDHA1-203ENST00000504120 RHBDL1O75783 438 aa14.21□□□□□ -0.13
PCDHA1-203ENST00000504120 MEF2BQ02080 365 aaPredicted RBP14.21□□□□□ -0.13
PCDHA1-203ENST00000504120 LAIR2Q6ISS4 152 aa14.21□□□□□ -0.13
PCDHA1-203ENST00000504120 TMEM54Q969K7 222 aa14.21□□□□□ -0.13
PCDHA1-203ENST00000504120 CALYQ9NYX4 217 aa14.21□□□□□ -0.13
PCDHA1-203ENST00000504120 IDI2-AS1Q9NZ38 188 aa14.21□□□□□ -0.13
PCDHA1-203ENST00000504120 A8MWL6 223 aa14.21□□□□□ -0.13
PCDHA1-203ENST00000504120 TMEM229AB2RXF0 380 aa14.21□□□□□ -0.13
PCDHA1-203ENST00000504120 CLDN18P56856 261 aa14.21□□□□□ -0.13
PCDHA1-203ENST00000504120 MYOZ3Q8TDC0 251 aa14.21□□□□□ -0.13
PCDHA1-203ENST00000504120 CD74P04233 296 aa14.21□□□□□ -0.13
PCDHA1-203ENST00000504120 MGPP08493 103 aa14.21□□□□□ -0.13
PCDHA1-203ENST00000504120 TMEM14DPA8MWL7 114 aa14.21□□□□□ -0.14
PCDHA1-203ENST00000504120 MT-ND6P03923 174 aa14.21□□□□□ -0.14
PCDHA1-203ENST00000504120 LINC00869P0C866 280 aa14.21□□□□□ -0.14
PCDHA1-203ENST00000504120 POM121Q96HA1 1249 aa14.21□□□□□ -0.14
PCDHA1-203ENST00000504120 J3QW42 95 aa14.21□□□□□ -0.14
PCDHA1-203ENST00000504120 FAM106CPP0CH98 169 aa14.21□□□□□ -0.14
PCDHA1-203ENST00000504120 HOXA4Q00056 320 aaPredicted RBP14.21□□□□□ -0.14
PCDHA1-203ENST00000504120 EGR4Q05215 589 aa14.21□□□□□ -0.14
PCDHA1-203ENST00000504120 CDCP2Q5VXM1 449 aa14.21□□□□□ -0.14
PCDHA1-203ENST00000504120 OR4A5Q8NH83 315 aa14.21□□□□□ -0.14
PCDHA1-203ENST00000504120 C5orf66Q9H5L9 145 aa14.21□□□□□ -0.14
PCDHA1-203ENST00000504120 LPAR2Q9HBW0 351 aa14.21□□□□□ -0.14
PCDHA1-203ENST00000504120 SLC35E4Q6ICL7 350 aa14.2□□□□□ -0.14
PCDHA1-203ENST00000504120 METTL1Q9UBP6 276 aaKnown RBP14.2□□□□□ -0.14
PCDHA1-203ENST00000504120 TMEM30BQ3MIR4 351 aa14.2□□□□□ -0.14
PCDHA1-203ENST00000504120 KLF14Q8TD94 323 aaPredicted RBP14.2□□□□□ -0.14
PCDHA1-203ENST00000504120 JPT1Q9UK76 154 aa14.2□□□□□ -0.14
PCDHA1-203ENST00000504120 NDUFB4O95168 129 aa14.2□□□□□ -0.14
PCDHA1-203ENST00000504120 F12P00748 615 aaPredicted RBP14.2□□□□□ -0.14
PCDHA1-203ENST00000504120 PTGDSP41222 190 aa14.2□□□□□ -0.14
PCDHA1-203ENST00000504120 MFAP2P55001 183 aa14.2□□□□□ -0.14
PCDHA1-203ENST00000504120 UCP3P55916 312 aa14.2□□□□□ -0.14
PCDHA1-203ENST00000504120 GUCA2BQ16661 112 aa14.2□□□□□ -0.14
PCDHA1-203ENST00000504120 SPANXN1Q5VSR9 72 aa14.2□□□□□ -0.14
PCDHA1-203ENST00000504120 PQLC2Q6ZP29 291 aa14.2□□□□□ -0.14
PCDHA1-203ENST00000504120 DYNLRB2Q8TF09 96 aa14.2□□□□□ -0.14
PCDHA1-203ENST00000504120 IL36RNQ9UBH0 155 aa14.2□□□□□ -0.14
PCDHA1-203ENST00000504120 ZNF137PP52743 207 aa14.2□□□□□ -0.14
PCDHA1-203ENST00000504120 ZNF383Q8NA42 475 aa14.2□□□□□ -0.14
PCDHA1-203ENST00000504120 TMSB15BA0A087X1C1 80 aa14.19□□□□□ -0.14
PCDHA1-203ENST00000504120 IZUMO4Q1ZYL8 232 aa14.19□□□□□ -0.14
PCDHA1-203ENST00000504120 AP5S1Q9NUS5 200 aa14.19□□□□□ -0.14
PCDHA1-203ENST00000504120 RALGAPA2Q2PPJ7 1873 aa14.19□□□□□ -0.14
PCDHA1-203ENST00000504120 PKIAP61925 76 aa14.19□□□□□ -0.14
PCDHA1-203ENST00000504120 RPS11P62280 158 aaKnown RBP eCLIP14.19□□□□□ -0.14
PCDHA1-203ENST00000504120 CISD1Q9NZ45 108 aaKnown RBP14.19□□□□□ -0.14
PCDHA1-203ENST00000504120 MIOXQ9UGB7 285 aa14.19□□□□□ -0.14
PCDHA1-203ENST00000504120 KLF4O43474 513 aa14.19□□□□□ -0.14
PCDHA1-203ENST00000504120 COMPP49747 757 aaPredicted RBP14.19□□□□□ -0.14
PCDHA1-203ENST00000504120 LOXL3P58215 753 aa14.19□□□□□ -0.14
PCDHA1-203ENST00000504120 UNC119Q13432 240 aa14.19□□□□□ -0.14
PCDHA1-203ENST00000504120 LSM10Q969L4 123 aaKnown RBP14.19□□□□□ -0.14
PCDHA1-203ENST00000504120 ZNF430Q9H8G1 570 aaPredicted RBP14.19□□□□□ -0.14
PCDHA1-203ENST00000504120 HILPDAQ9Y5L2 63 aa14.19□□□□□ -0.14
PCDHA1-203ENST00000504120 SP9P0CG40 484 aa14.19□□□□□ -0.14
PCDHA1-203ENST00000504120 HSPE1P61604 102 aaKnown RBP14.19□□□□□ -0.14
PCDHA1-203ENST00000504120 CDC42EP3Q9UKI2 254 aa14.19□□□□□ -0.14
PCDHA1-203ENST00000504120 ZNHIT1O43257 154 aa14.18□□□□□ -0.14
PCDHA1-203ENST00000504120 HTN1P15515 57 aa14.18□□□□□ -0.14
PCDHA1-203ENST00000504120 CEBPDP49716 269 aaPredicted RBP14.18□□□□□ -0.14
PCDHA1-203ENST00000504120 TMEM140Q9NV12 185 aa14.18□□□□□ -0.14
PCDHA1-203ENST00000504120 ZNF236Q9UL36 1845 aa14.18□□□□□ -0.14
PCDHA1-203ENST00000504120 C1QL1O75973 258 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms