RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 Q6ZR03 302 aa12.42□□□□□ -0.42
CHTOP-206ENST00000495554 MBD3L2Q8NHZ7 208 aaPredicted RBP12.42□□□□□ -0.42
CHTOP-206ENST00000495554 SMCO4Q9NRQ5 59 aa12.42□□□□□ -0.42
CHTOP-206ENST00000495554 TP53TG5Q9Y2B4 290 aa12.42□□□□□ -0.42
CHTOP-206ENST00000495554 SPTBN2O15020 2390 aa12.42□□□□□ -0.42
CHTOP-206ENST00000495554 IGHV2OR16-5A0A0B4J2B6 119 aa12.41□□□□□ -0.42
CHTOP-206ENST00000495554 C12orf77C9JDV5 145 aa12.41□□□□□ -0.42
CHTOP-206ENST00000495554 IL2RGP31785 369 aa12.41□□□□□ -0.42
CHTOP-206ENST00000495554 ASCL5Q7RTU5 278 aa12.41□□□□□ -0.42
CHTOP-206ENST00000495554 ZNF645Q8N7E2 425 aa12.41□□□□□ -0.42
CHTOP-206ENST00000495554 OR1L1Q8NH94 360 aa12.41□□□□□ -0.42
CHTOP-206ENST00000495554 KCNJ16Q9NPI9 418 aa12.41□□□□□ -0.42
CHTOP-206ENST00000495554 FBXO7Q9Y3I1 522 aa12.41□□□□□ -0.42
CHTOP-206ENST00000495554 OR5H1A6NKK0 313 aa12.41□□□□□ -0.42
CHTOP-206ENST00000495554 H3BP45 60 aa12.41□□□□□ -0.42
CHTOP-206ENST00000495554 IFNL4K9M1U5 179 aa12.41□□□□□ -0.42
CHTOP-206ENST00000495554 TAS2R30P59541 319 aa12.41□□□□□ -0.42
CHTOP-206ENST00000495554 AESQ08117 197 aa12.41□□□□□ -0.42
CHTOP-206ENST00000495554 RNF212Q495C1 297 aa12.41□□□□□ -0.42
CHTOP-206ENST00000495554 PRAMEF6Q5VXH4 476 aa12.41□□□□□ -0.42
CHTOP-206ENST00000495554 RPRMLQ8N4K4 120 aa12.41□□□□□ -0.42
CHTOP-206ENST00000495554 FAM169BQ8N8A8 192 aa12.41□□□□□ -0.42
CHTOP-206ENST00000495554 MSL2Q9HCI7 577 aa12.41□□□□□ -0.42
CHTOP-206ENST00000495554 FZR1Q9UM11 496 aa12.41□□□□□ -0.42
CHTOP-206ENST00000495554 IGHV1-18A0A0C4DH31 117 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 A0A1B0GV50 99 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 IFNA5P01569 189 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 HNF1AP20823 631 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 RUNX1Q01196 453 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 SMIM21Q3B7S5 101 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 AKR1C8PQ5T2L2 129 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 DPPA3Q6W0C5 159 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 BHLHA15Q7RTS1 189 aaPredicted RBP12.4□□□□□ -0.42
CHTOP-206ENST00000495554 TCEAL7Q9BRU2 100 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 ABHD14AQ9BUJ0 271 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 TOLLIPQ9H0E2 274 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 HIPK2Q9H2X6 1198 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 FAM215AQ9Y5M1 114 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 PAX6P26367 422 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 GABRA2P47869 451 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 MZT1Q08AG7 82 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 AKIRIN2Q53H80 203 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 SPSB3Q6PJ21 355 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 FGFRL1Q8N441 504 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 NINJ1Q92982 152 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 COQ2Q96H96 371 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 DMXL2Q8TDJ6 3036 aa12.4□□□□□ -0.42
CHTOP-206ENST00000495554 HBZP02008 142 aa12.39□□□□□ -0.43
CHTOP-206ENST00000495554 NUTF2P61970 127 aaKnown RBP12.39□□□□□ -0.43
CHTOP-206ENST00000495554 TMEM267Q0VDI3 215 aaPredicted RBP12.39□□□□□ -0.43
CHTOP-206ENST00000495554 OR2D2Q9H210 308 aa12.39□□□□□ -0.43
CHTOP-206ENST00000495554 RPS10P5Q9NQ39 176 aa12.39□□□□□ -0.43
CHTOP-206ENST00000495554 PSENENQ9NZ42 101 aa12.39□□□□□ -0.43
CHTOP-206ENST00000495554 KIAA1456Q9P272 454 aa12.39□□□□□ -0.43
CHTOP-206ENST00000495554 WASF3Q9UPY6 502 aa12.39□□□□□ -0.43
CHTOP-206ENST00000495554 MMP24Q9Y5R2 645 aa12.39□□□□□ -0.43
CHTOP-206ENST00000495554 RBFOX3A6NFN3 312 aa12.39□□□□□ -0.43
CHTOP-206ENST00000495554 FAM90A26D6RGX4 464 aa12.39□□□□□ -0.43
CHTOP-206ENST00000495554 TLE4Q04727 773 aa12.39□□□□□ -0.43
CHTOP-206ENST00000495554 AWAT1Q58HT5 328 aa12.39□□□□□ -0.43
CHTOP-206ENST00000495554 OR52L2PQ8NGH6 319 aa12.39□□□□□ -0.43
CHTOP-206ENST00000495554 RXFP4Q8TDU9 374 aa12.39□□□□□ -0.43
CHTOP-206ENST00000495554 TNFRSF14Q92956 283 aa12.39□□□□□ -0.43
CHTOP-206ENST00000495554 RHOVQ96L33 236 aa12.39□□□□□ -0.43
CHTOP-206ENST00000495554 RPH3ALQ9UNE2 315 aa12.39□□□□□ -0.43
CHTOP-206ENST00000495554 BSNQ9UPA5 3926 aa12.39□□□□□ -0.43
CHTOP-206ENST00000495554 HEATR1Q9H583 2144 aaKnown RBP12.39□□□□□ -0.43
CHTOP-206ENST00000495554 COLCA2A8K830 154 aa12.38□□□□□ -0.43
CHTOP-206ENST00000495554 CCL20P78556 96 aa12.38□□□□□ -0.43
CHTOP-206ENST00000495554 AVPI1Q5T686 147 aa12.38□□□□□ -0.43
CHTOP-206ENST00000495554 C15orf54Q8N8G6 183 aa12.38□□□□□ -0.43
CHTOP-206ENST00000495554 RNF150Q9ULK6 438 aa12.38□□□□□ -0.43
CHTOP-206ENST00000495554 SLC25A15Q9Y619 301 aa12.38□□□□□ -0.43
CHTOP-206ENST00000495554 ANKRD11Q6UB99 2663 aaPredicted RBP12.38□□□□□ -0.43
CHTOP-206ENST00000495554 ATMQ13315 3056 aa12.38□□□□□ -0.43
CHTOP-206ENST00000495554 ITGB1BP1O14713 200 aa12.38□□□□□ -0.43
CHTOP-206ENST00000495554 IAPPP10997 89 aa12.38□□□□□ -0.43
CHTOP-206ENST00000495554 HBG1P69891 147 aa12.38□□□□□ -0.43
CHTOP-206ENST00000495554 HBG2P69892 147 aa12.38□□□□□ -0.43
CHTOP-206ENST00000495554 HOXA4Q00056 320 aaPredicted RBP12.38□□□□□ -0.43
CHTOP-206ENST00000495554 COL10A1Q03692 680 aa12.38□□□□□ -0.43
CHTOP-206ENST00000495554 MSMO1Q15800 293 aa12.38□□□□□ -0.43
CHTOP-206ENST00000495554 SP5Q6BEB4 398 aaPredicted RBP12.38□□□□□ -0.43
CHTOP-206ENST00000495554 ZNF474Q6S9Z5 364 aaPredicted RBP12.38□□□□□ -0.43
CHTOP-206ENST00000495554 THNSL2Q86YJ6 484 aa12.38□□□□□ -0.43
CHTOP-206ENST00000495554 MRGPRDQ8TDS7 321 aa12.38□□□□□ -0.43
CHTOP-206ENST00000495554 WFDC12Q8WWY7 111 aa12.38□□□□□ -0.43
CHTOP-206ENST00000495554 MISP3Q96FF7 219 aa12.38□□□□□ -0.43
CHTOP-206ENST00000495554 RARRES2Q99969 163 aa12.38□□□□□ -0.43
CHTOP-206ENST00000495554 C7orf77A4D0Y5 90 aa12.37□□□□□ -0.43
CHTOP-206ENST00000495554 M0R036 132 aa12.37□□□□□ -0.43
CHTOP-206ENST00000495554 CRYBA1P05813 215 aa12.37□□□□□ -0.43
CHTOP-206ENST00000495554 RAB2AP61019 212 aa12.37□□□□□ -0.43
CHTOP-206ENST00000495554 CATR1Q13166 79 aa12.37□□□□□ -0.43
CHTOP-206ENST00000495554 SCGB1C1Q8TD33 95 aa12.37□□□□□ -0.43
CHTOP-206ENST00000495554 CD300LFQ8TDQ1 290 aa12.37□□□□□ -0.43
CHTOP-206ENST00000495554 HBE1P02100 147 aa12.37□□□□□ -0.43
CHTOP-206ENST00000495554 SNRNP70P08621 437 aaKnown RBP12.37□□□□□ -0.43
CHTOP-206ENST00000495554 METTL15P1P0C7V9 234 aa12.37□□□□□ -0.43
CHTOP-206ENST00000495554 PAX5Q02548 391 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms