RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 IFT22Q9H7X7 185 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 CENPEQ02224 2701 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 CSPG4Q6UVK1 2322 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 A0A1W2PNU3 283 aaPredicted RBP11.38□□□□□ -0.59
GPC1-209ENST00000495100 YKT6O15498 198 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 COL10A1Q03692 680 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 RIPPLY2Q5TAB7 128 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 NCR3LG1Q68D85 454 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 MOGAT3Q86VF5 341 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 LYG1Q8N1E2 194 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 ABHD12Q8N2K0 398 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 ZNF610Q8N9Z0 462 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 PTPRQQ9UMZ3 2332 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 ATG2AQ2TAZ0 1938 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 IGHV3-21A0A0B4J1V1 117 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 AP4M1O00189 453 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 GALR2O43603 387 aaPredicted RBP11.38□□□□□ -0.59
GPC1-209ENST00000495100 CTXN2P0C2S0 81 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 UCP2P55851 309 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 MRPL41Q8IXM3 137 aaKnown RBP11.38□□□□□ -0.59
GPC1-209ENST00000495100 C10orf35Q96D05 121 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 OR51I2Q9H344 312 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 TMEM9BQ9NQ34 198 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 ZNRD1Q9P1U0 126 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 TP53TG5Q9Y2B4 290 aa11.38□□□□□ -0.59
GPC1-209ENST00000495100 J3QT63 122 aa11.37□□□□□ -0.59
GPC1-209ENST00000495100 MYOD1P15172 320 aa11.37□□□□□ -0.59
GPC1-209ENST00000495100 MPZP25189 248 aa11.37□□□□□ -0.59
GPC1-209ENST00000495100 CCL8P80075 99 aa11.37□□□□□ -0.59
GPC1-209ENST00000495100 CATR1Q13166 79 aa11.37□□□□□ -0.59
GPC1-209ENST00000495100 ABLIM2Q6H8Q1 611 aa11.37□□□□□ -0.59
GPC1-209ENST00000495100 ZNF383Q8NA42 475 aa11.37□□□□□ -0.59
GPC1-209ENST00000495100 LFNGQ8NES3 379 aa11.37□□□□□ -0.59
GPC1-209ENST00000495100 LIN7CQ9NUP9 197 aaKnown RBP11.37□□□□□ -0.59
GPC1-209ENST00000495100 C12orf77C9JDV5 145 aa11.37□□□□□ -0.59
GPC1-209ENST00000495100 RPL30P62888 115 aaKnown RBP11.37□□□□□ -0.59
GPC1-209ENST00000495100 SRSF4Q08170 494 aaKnown RBP11.37□□□□□ -0.59
GPC1-209ENST00000495100 HMGN3Q15651 99 aa11.37□□□□□ -0.59
GPC1-209ENST00000495100 MSMO1Q15800 293 aa11.37□□□□□ -0.59
GPC1-209ENST00000495100 FAM209BQ5JX69 171 aa11.37□□□□□ -0.59
GPC1-209ENST00000495100 OR4D5Q8NGN0 318 aa11.37□□□□□ -0.59
GPC1-209ENST00000495100 RCC1LQ96I51 464 aaKnown RBP11.37□□□□□ -0.59
GPC1-209ENST00000495100 SGK494Q96LW2 274 aa11.37□□□□□ -0.59
GPC1-209ENST00000495100 PRDM14Q9GZV8 571 aa11.37□□□□□ -0.59
GPC1-209ENST00000495100 RNF122Q9H9V4 155 aa11.37□□□□□ -0.59
GPC1-209ENST00000495100 ENY2Q9NPA8 101 aa11.37□□□□□ -0.59
GPC1-209ENST00000495100 GAR1Q9NY12 217 aaKnown RBP11.37□□□□□ -0.59
GPC1-209ENST00000495100 NUDT19A8MXV4 375 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 HBE1P02100 147 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 PSMB3P49720 205 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 IL15RAQ13261 267 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 GINS3Q9BRX5 216 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 ELOVL1Q9BW60 279 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 NAV3Q8IVL0 2385 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 ACACBO00763 2458 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 CXorf65A6NEN9 183 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 RRP8O43159 456 aaKnown RBP11.36□□□□□ -0.59
GPC1-209ENST00000495100 IFNA1P01562 189 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 CD33P20138 364 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 MDH2P40926 338 aaKnown RBP11.36□□□□□ -0.59
GPC1-209ENST00000495100 TCL1AP56279 114 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 TAS2R30P59541 319 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 WFDC8Q8IUA0 241 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 OR5D13Q8NGL4 314 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 OR13D1Q8NGV5 346 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 DTD1Q8TEA8 209 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 NUDT16L1Q9BRJ7 211 aaKnown RBP11.36□□□□□ -0.59
GPC1-209ENST00000495100 ZNF705FA8MVS1 300 aaPredicted RBP11.36□□□□□ -0.59
GPC1-209ENST00000495100 ZNF705DP0CH99 300 aaPredicted RBP11.36□□□□□ -0.59
GPC1-209ENST00000495100 ZNF705BP0CI00 300 aaPredicted RBP11.36□□□□□ -0.59
GPC1-209ENST00000495100 EIF2S3P41091 472 aaKnown RBP11.36□□□□□ -0.59
GPC1-209ENST00000495100 ERVK-16P61578 105 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 OR13A1Q8NGR1 328 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 RELNP78509 3460 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 PTPN13Q12923 2485 aa11.36□□□□□ -0.59
GPC1-209ENST00000495100 K7N7A8 449 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 ETV2O00321 342 aaPredicted RBP11.35□□□□□ -0.59
GPC1-209ENST00000495100 SPINT2O43291 252 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 ENSAO43768 121 aaKnown RBP11.35□□□□□ -0.59
GPC1-209ENST00000495100 PITX3O75364 302 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 IGHV1-2P23083 117 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 RAB5CP51148 216 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 RNPS1Q15287 305 aaKnown RBP11.35□□□□□ -0.59
GPC1-209ENST00000495100 SSX2Q16385 188 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 SSC4DQ8WTU2 575 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 TLN2Q9Y4G6 2542 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 NCKAP5O14513 1909 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 TMEM30CPA0ZSE6 113 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 FOXI3A8MTJ6 420 aaPredicted RBP11.35□□□□□ -0.59
GPC1-209ENST00000495100 PTBP3O95758 552 aaKnown RBP11.35□□□□□ -0.59
GPC1-209ENST00000495100 IGKV1-5P01602 117 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 GATA2P23769 480 aaPredicted RBP11.35□□□□□ -0.59
GPC1-209ENST00000495100 RPRMLQ8N4K4 120 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 ZNF251Q9BRH9 671 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 PCGF1Q9BSM1 259 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 FUT9Q9Y231 359 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 OR5B21A6NL26 309 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 C1QTNF9BB2RNN3 333 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 PPP5D1E7EU14 171 aa11.35□□□□□ -0.59
GPC1-209ENST00000495100 SCGB1D1O95968 90 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms