RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 FAM162BQ5T6X4 162 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 OPN5Q6U736 354 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 CALHM3Q86XJ0 350 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 C12orf29Q8N999 325 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 OR10G9Q8NGN4 311 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 RASSF5Q8WWW0 418 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 KLK6Q92876 244 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 SMIM12Q96EX1 92 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 CPNE2Q96FN4 548 aaPredicted RBP2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 IMP4Q96G21 291 aaKnown RBP2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 PPP1R2P1Q96PQ5 205 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 OR4K3Q96R72 315 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 SLC25A2Q9BXI2 301 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 PLA2G2FQ9BZM2 168 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 PCBD2Q9H0N5 130 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 DIABLOQ9NR28 239 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 CMTM6Q9NX76 183 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF706Q9Y5V0 76 aaPredicted RBP2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 ENPP4Q9Y6X5 453 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 SPEGQ15772 3267 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 MUC6Q6W4X9 2439 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 ZFHX2Q9C0A1 2572 aaPredicted RBP2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 DCHS1Q96JQ0 3298 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 PTPRDP23468 1912 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 GREB1Q4ZG55 1949 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 LOC389332A0A1B0GUA5 103 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 C5orf63A6NC05 138 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF850A8MQ14 1090 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 KRBOX1C9JBD0 128 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 ISLRO14498 428 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 CCL16O15467 120 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF354AO60765 605 aaPredicted RBP2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 CD36P16671 472 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 PRTN3P24158 256 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 IL3RAP26951 378 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 ELK4P28324 431 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 ARPP19P56211 112 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 SYNJ2BPP57105 145 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 SLC35A2P78381 396 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF45Q02386 682 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 C1DQ13901 141 aaKnown RBP2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 NSDHLQ15738 373 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF404Q494X3 552 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 TRMT12Q53H54 448 aaKnown RBP2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 HIST2H3PS2Q5TEC6 136 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 RSBN1Q5VWQ0 802 aaPredicted RBP2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 TRIQKQ629K1 86 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 PEX26Q7Z412 305 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 TMEM179BQ7Z7N9 219 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 SLC25A42Q86VD7 318 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 DOLPP1Q86YN1 238 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 TGIF2LYQ8IUE0 185 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 NPBQ8NG41 125 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 OR2M7Q8NG81 312 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 OR1S1Q8NH92 325 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 FAM104AQ969W3 186 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 SEH1LQ96EE3 360 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 BMFQ96LC9 184 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 OR2V2Q96R30 315 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 PSMB7Q99436 277 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 PHB2Q99623 299 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 SIGMAR1Q99720 223 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 CHAC1Q9BUX1 264 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 SFXN3Q9BWM7 321 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 RNASE7Q9H1E1 156 aaKnown RBP2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 DCSTAMPQ9H295 470 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF430Q9H8G1 570 aaPredicted RBP2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 SND1-IT1Q9HBX3 110 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 C19orf12Q9NSK7 152 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 IDI2-AS1Q9NZ38 188 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF581Q9P0T4 197 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 DEC1Q9P2X7 70 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 PCYOX1Q9UHG3 505 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 RWDD2AQ9UIY3 292 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 HHLA2Q9UM44 414 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 CCL26Q9Y258 94 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 CARHSP1Q9Y2V2 147 aaKnown RBP2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 UFC1Q9Y3C8 167 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 YTHDF2Q9Y5A9 579 aaKnown RBP2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 DYSFO75923 2080 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF318Q5VUA4 2279 aa2.23□□□□□ -2.05
DEPDC1-204ENST00000489862 TRAV8-3A0A0A6YYJ7 113 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 FAM236DA0A1B0GTK5 79 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 FAM92AA1XBS5 289 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 INMT-MINDY4F8WBC2 141 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 UPK1AO00322 258 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 STX10O60499 249 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 PLIN3O60664 434 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 HSPB1P04792 205 aaKnown RBP2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 GUSBP08236 651 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 NBEAP1P0C6P0 100 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 ZDHHC11BP0C7U3 371 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 FAM236CP0DP71 79 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 TGFBR1P36897 503 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF133P52736 654 aaPredicted RBP2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 CTBP2P56545 445 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 UBE2NP61088 152 aaKnown RBP2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 GRB2P62993 217 aaKnown RBP2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 MS4A2Q01362 244 aa2.22□□□□□ -2.05
DEPDC1-204ENST00000489862 ARFRP1Q13795 201 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms