RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 KIR2DS1Q14954 304 aa10.12□□□□□ -0.79
HDAC1-209ENST00000484305 C5orf64Q2M2E5 130 aa10.12□□□□□ -0.79
HDAC1-209ENST00000484305 CDNFQ49AH0 187 aa10.12□□□□□ -0.79
HDAC1-209ENST00000484305 ETV3LQ6ZN32 361 aa10.12□□□□□ -0.79
HDAC1-209ENST00000484305 OR5AN1Q8NGI8 311 aa10.12□□□□□ -0.79
HDAC1-209ENST00000484305 CABLES2Q9BTV7 478 aa10.12□□□□□ -0.79
HDAC1-209ENST00000484305 CENPOQ9BU64 300 aa10.12□□□□□ -0.79
HDAC1-209ENST00000484305 GON7Q9BXV9 100 aa10.12□□□□□ -0.79
HDAC1-209ENST00000484305 TOLLIPQ9H0E2 274 aa10.12□□□□□ -0.79
HDAC1-209ENST00000484305 ZFP57Q9NU63 452 aa10.12□□□□□ -0.79
HDAC1-209ENST00000484305 ZNF221Q9UK13 617 aa10.12□□□□□ -0.79
HDAC1-209ENST00000484305 IGKV1D-8A0A087WSZ0 117 aa10.11□□□□□ -0.79
HDAC1-209ENST00000484305 TRBV6-7A0A0A0MS04 114 aa10.11□□□□□ -0.79
HDAC1-209ENST00000484305 IGHV7-81A0A0B4J1V7 117 aa10.11□□□□□ -0.79
HDAC1-209ENST00000484305 NUDT19A8MXV4 375 aa10.11□□□□□ -0.79
HDAC1-209ENST00000484305 H7C2Y5 167 aa10.11□□□□□ -0.79
HDAC1-209ENST00000484305 HLA-DRB1P01911 266 aa10.11□□□□□ -0.79
HDAC1-209ENST00000484305 MC5RP33032 325 aa10.11□□□□□ -0.79
HDAC1-209ENST00000484305 TALDO1P37837 337 aa10.11□□□□□ -0.79
HDAC1-209ENST00000484305 SERPINB10P48595 397 aa10.11□□□□□ -0.79
HDAC1-209ENST00000484305 LIN54Q6MZP7 749 aa10.11□□□□□ -0.79
HDAC1-209ENST00000484305 C8orf86Q6ZUL3 223 aa10.11□□□□□ -0.79
HDAC1-209ENST00000484305 LINC00482Q8N8I6 264 aa10.11□□□□□ -0.79
HDAC1-209ENST00000484305 ZNF383Q8NA42 475 aa10.11□□□□□ -0.79
HDAC1-209ENST00000484305 KLHL30-AS1Q8NEE0 82 aa10.11□□□□□ -0.79
HDAC1-209ENST00000484305 OR10J5Q8NHC4 309 aa10.11□□□□□ -0.79
HDAC1-209ENST00000484305 LGALS14Q8TCE9 139 aa10.11□□□□□ -0.79
HDAC1-209ENST00000484305 OR51J1Q9H342 316 aa10.11□□□□□ -0.79
HDAC1-209ENST00000484305 FBXL15Q9H469 300 aa10.11□□□□□ -0.79
HDAC1-209ENST00000484305 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.11□□□□□ -0.79
HDAC1-209ENST00000484305 KIAA1456Q9P272 454 aa10.11□□□□□ -0.79
HDAC1-209ENST00000484305 WASHC3Q9Y3C0 194 aa10.11□□□□□ -0.79
HDAC1-209ENST00000484305 PRKDCP78527 4128 aaKnown RBP10.1□□□□□ -0.79
HDAC1-209ENST00000484305 G3V318 75 aa10.1□□□□□ -0.79
HDAC1-209ENST00000484305 RRHO14718 337 aa10.1□□□□□ -0.79
HDAC1-209ENST00000484305 ATP6V0E1O15342 81 aa10.1□□□□□ -0.79
HDAC1-209ENST00000484305 IGHG4P01861 327 aa10.1□□□□□ -0.79
HDAC1-209ENST00000484305 IGKV1-16P04430 117 aa10.1□□□□□ -0.79
HDAC1-209ENST00000484305 ELANEP08246 267 aa10.1□□□□□ -0.79
HDAC1-209ENST00000484305 GSTP1P09211 210 aaKnown RBP10.1□□□□□ -0.79
HDAC1-209ENST00000484305 OR8U9P0C7N5 309 aa10.1□□□□□ -0.79
HDAC1-209ENST00000484305 VDAC1P21796 283 aa10.1□□□□□ -0.79
HDAC1-209ENST00000484305 THBS3P49746 956 aa10.1□□□□□ -0.79
HDAC1-209ENST00000484305 FOXE3Q13461 319 aa10.1□□□□□ -0.79
HDAC1-209ENST00000484305 SRSF7Q16629 238 aaKnown RBP eCLIP10.1□□□□□ -0.79
HDAC1-209ENST00000484305 CXorf66Q5JRM2 361 aaPredicted RBP10.1□□□□□ -0.79
HDAC1-209ENST00000484305 IDNKQ5T6J7 187 aa10.1□□□□□ -0.79
HDAC1-209ENST00000484305 ZNF695Q8IW36 515 aa10.1□□□□□ -0.79
HDAC1-209ENST00000484305 MRPL41Q8IXM3 137 aaKnown RBP10.1□□□□□ -0.79
HDAC1-209ENST00000484305 RNF152Q8N8N0 203 aa10.1□□□□□ -0.79
HDAC1-209ENST00000484305 OR5H6Q8NGV6 325 aa10.1□□□□□ -0.79
HDAC1-209ENST00000484305 OR8U1Q8NH10 309 aa10.1□□□□□ -0.79
HDAC1-209ENST00000484305 PARP11Q9NR21 331 aa10.1□□□□□ -0.79
HDAC1-209ENST00000484305 ZNF580Q9UK33 172 aa10.1□□□□□ -0.79
HDAC1-209ENST00000484305 WSB1Q9Y6I7 421 aa10.1□□□□□ -0.79
HDAC1-209ENST00000484305 TMEM235A6NFC5 223 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 M0R1X1 148 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 FCN1O00602 326 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 RBBP9O75884 186 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 DIRAS3O95661 229 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 TFAP2AP05549 437 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 DTYMKP23919 212 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 TGFBR1P36897 503 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 ARL6IP1Q15041 203 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 ZNF260Q3ZCT1 412 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 HACD4Q5VWC8 232 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 FOXB2Q5VYV0 432 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 Q6ZS49 121 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.09□□□□□ -0.79
HDAC1-209ENST00000484305 TSPAN14Q8NG11 270 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 NUDCD2Q8WVJ2 157 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 C5orf30Q96GV9 206 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 RAX2Q96IS3 184 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 DUX3Q96PT4 197 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 ST6GALNAC5Q9BVH7 336 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 OR2D2Q9H210 308 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 SDHAF2Q9NX18 166 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 RHBDL2Q9NX52 303 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 FBXO7Q9Y3I1 522 aa10.09□□□□□ -0.79
HDAC1-209ENST00000484305 A0A087WXM4 84 aa10.08□□□□□ -0.8
HDAC1-209ENST00000484305 TRAV41A0A0B4J266 112 aa10.08□□□□□ -0.8
HDAC1-209ENST00000484305 SSX5O60225 188 aa10.08□□□□□ -0.8
HDAC1-209ENST00000484305 TNFAIP8O95379 198 aa10.08□□□□□ -0.8
HDAC1-209ENST00000484305 OR5H8P0DN80 308 aa10.08□□□□□ -0.8
HDAC1-209ENST00000484305 PSMB8P28062 276 aa10.08□□□□□ -0.8
HDAC1-209ENST00000484305 PPIFP30405 207 aaKnown RBP10.08□□□□□ -0.8
HDAC1-209ENST00000484305 SLC6A1P30531 599 aa10.08□□□□□ -0.8
HDAC1-209ENST00000484305 MYCNOSP40205 109 aa10.08□□□□□ -0.8
HDAC1-209ENST00000484305 CDX1P47902 265 aaPredicted RBP10.08□□□□□ -0.8
HDAC1-209ENST00000484305 RPS16P62249 146 aaKnown RBP10.08□□□□□ -0.8
HDAC1-209ENST00000484305 CX3CL1P78423 397 aa10.08□□□□□ -0.8
HDAC1-209ENST00000484305 NDPQ00604 133 aa10.08□□□□□ -0.8
HDAC1-209ENST00000484305 PLGLAQ15195 96 aa10.08□□□□□ -0.8
HDAC1-209ENST00000484305 PSG5Q15238 335 aa10.08□□□□□ -0.8
HDAC1-209ENST00000484305 DEFB136Q30KP8 78 aa10.08□□□□□ -0.8
HDAC1-209ENST00000484305 H1FOOQ8IZA3 346 aaPredicted RBP10.08□□□□□ -0.8
HDAC1-209ENST00000484305 SLC25A38Q96DW6 304 aa10.08□□□□□ -0.8
HDAC1-209ENST00000484305 YIPF6Q96EC8 236 aa10.08□□□□□ -0.8
HDAC1-209ENST00000484305 RCC1LQ96I51 464 aaKnown RBP10.08□□□□□ -0.8
HDAC1-209ENST00000484305 P2RX4Q99571 388 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms