RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 DEFB136Q30KP8 78 aa7.97□□□□□ -1.13
SF3A3-204ENST00000462258 RNF152Q8N8N0 203 aa7.97□□□□□ -1.13
SF3A3-204ENST00000462258 NPBQ8NG41 125 aa7.97□□□□□ -1.13
SF3A3-204ENST00000462258 OR4A4PQ8NGN8 299 aa7.97□□□□□ -1.13
SF3A3-204ENST00000462258 OR8U1Q8NH10 309 aa7.97□□□□□ -1.13
SF3A3-204ENST00000462258 DPF1Q92782 380 aa7.97□□□□□ -1.13
SF3A3-204ENST00000462258 PTX4Q96A99 478 aa7.97□□□□□ -1.13
SF3A3-204ENST00000462258 P2RX4Q99571 388 aa7.97□□□□□ -1.13
SF3A3-204ENST00000462258 CABLES2Q9BTV7 478 aa7.97□□□□□ -1.13
SF3A3-204ENST00000462258 YTHDF1Q9BYJ9 559 aaKnown RBP7.97□□□□□ -1.13
SF3A3-204ENST00000462258 GPR61Q9BZJ8 451 aa7.97□□□□□ -1.13
SF3A3-204ENST00000462258 OR51J1Q9H342 316 aa7.97□□□□□ -1.13
SF3A3-204ENST00000462258 GHITMQ9H3K2 345 aa7.97□□□□□ -1.13
SF3A3-204ENST00000462258 RDH8Q9NYR8 311 aa7.97□□□□□ -1.13
SF3A3-204ENST00000462258 METTL21EPA6NDL7 271 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 NOTOA8MTQ0 251 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 G3V318 75 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 BET1O15155 118 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 RBBP9O75884 186 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 APOA2P02652 100 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 TFAP2AP05549 437 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 GSTP1P09211 210 aaKnown RBP7.96□□□□□ -1.14
SF3A3-204ENST00000462258 PSMB8P28062 276 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 MC5RP33032 325 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 RAB25P57735 213 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 PLGLAQ15195 96 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 ECSCRQ19T08 205 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 DRAXINQ8NBI3 349 aaPredicted RBP7.96□□□□□ -1.14
SF3A3-204ENST00000462258 OR5AN1Q8NGI8 311 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 MAFIPQ8WZ33 124 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 RAX2Q96IS3 184 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 DUX3Q96PT4 197 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 OR2D2Q9H210 308 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 FBXL15Q9H469 300 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 ZNF221Q9UK13 617 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 RNF150Q9ULK6 438 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 SSR3Q9UNL2 185 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 WSB1Q9Y6I7 421 aa7.96□□□□□ -1.14
SF3A3-204ENST00000462258 DNAH9Q9NYC9 4486 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 TRAV41A0A0B4J266 112 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 M0R1X1 148 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 CCL24O00175 119 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 RRHO14718 337 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 SPDEFO95238 335 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 DIRAS3O95661 229 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 GSTT2P0CG29 244 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 GSTT2BP0CG30 244 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 PPIFP30405 207 aaKnown RBP7.95□□□□□ -1.14
SF3A3-204ENST00000462258 HOXD3P31249 432 aaPredicted RBP7.95□□□□□ -1.14
SF3A3-204ENST00000462258 CDX1P47902 265 aaPredicted RBP7.95□□□□□ -1.14
SF3A3-204ENST00000462258 ARFRP1Q13795 201 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 ARL6IP1Q15041 203 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 NEDD8Q15843 81 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 KCTD21Q4G0X4 260 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 IGSF11Q5DX21 431 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 LIN54Q6MZP7 749 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 SFXN4Q6P4A7 337 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 PDPNQ86YL7 162 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 ZNF383Q8NA42 475 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.95□□□□□ -1.14
SF3A3-204ENST00000462258 OR10J5Q8NHC4 309 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 LGALS14Q8TCE9 139 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 MYOZ3Q8TDC0 251 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 ABHD5Q8WTS1 349 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 C4orf3Q8WVX3 66 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 CHCHD6Q9BRQ6 235 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 MCRIP2Q9BUT9 160 aaKnown RBP7.95□□□□□ -1.14
SF3A3-204ENST00000462258 TOLLIPQ9H0E2 274 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 ATG5Q9H1Y0 275 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 OR51E2Q9H255 320 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 ZNF230Q9UIE0 474 aaPredicted RBP7.95□□□□□ -1.14
SF3A3-204ENST00000462258 DAPK2Q9UIK4 370 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 FBXO7Q9Y3I1 522 aa7.95□□□□□ -1.14
SF3A3-204ENST00000462258 TRBV6-7A0A0A0MS04 114 aa7.94□□□□□ -1.14
SF3A3-204ENST00000462258 PROP1O75360 226 aa7.94□□□□□ -1.14
SF3A3-204ENST00000462258 IGKV1-16P04430 117 aa7.94□□□□□ -1.14
SF3A3-204ENST00000462258 OR8U9P0C7N5 309 aa7.94□□□□□ -1.14
SF3A3-204ENST00000462258 DTYMKP23919 212 aa7.94□□□□□ -1.14
SF3A3-204ENST00000462258 TALDO1P37837 337 aa7.94□□□□□ -1.14
SF3A3-204ENST00000462258 EGFEM1PQ0D2K5 195 aa7.94□□□□□ -1.14
SF3A3-204ENST00000462258 TPRA1Q86W33 373 aa7.94□□□□□ -1.14
SF3A3-204ENST00000462258 RNF5Q99942 180 aa7.94□□□□□ -1.14
SF3A3-204ENST00000462258 GINS4Q9BRT9 223 aa7.94□□□□□ -1.14
SF3A3-204ENST00000462258 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.94□□□□□ -1.14
SF3A3-204ENST00000462258 SLC35D1Q9NTN3 355 aa7.94□□□□□ -1.14
SF3A3-204ENST00000462258 METTL1Q9UBP6 276 aaKnown RBP7.94□□□□□ -1.14
SF3A3-204ENST00000462258 ELF5Q9UKW6 265 aaPredicted RBP7.94□□□□□ -1.14
SF3A3-204ENST00000462258 RRP15Q9Y3B9 282 aaKnown RBP7.94□□□□□ -1.14
SF3A3-204ENST00000462258 A3GALT2U3KPV4 340 aa7.94□□□□□ -1.14
SF3A3-204ENST00000462258 LOC100506127A0A0U1RQW1 187 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 A0A1W2PN81 502 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 SCGNO76038 276 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 CA2P00918 260 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 IGLV1-40P01703 118 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 SNRPBP14678 240 aaKnown RBP7.93□□□□□ -1.14
SF3A3-204ENST00000462258 SDC2P34741 201 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 CHRNA7P36544 502 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 CRIP2P52943 208 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-204ENST00000462258 LINC00205P59089 165 aa7.93□□□□□ -1.14
SF3A3-204ENST00000462258 KRTAP10-11P60412 298 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms