RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 NCMAPQ5T1S8 102 aa15.19■□□□□ 0.02
HPS3-202ENST00000460120 RCC1LQ96I51 464 aaKnown RBP15.19■□□□□ 0.02
HPS3-202ENST00000460120 CEBPZOSA8MTT3 80 aa15.19■□□□□ 0.02
HPS3-202ENST00000460120 IGKV3-15P01624 115 aa15.19■□□□□ 0.02
HPS3-202ENST00000460120 IGHG3P01860 377 aa15.19■□□□□ 0.02
HPS3-202ENST00000460120 TNFRSF9Q07011 255 aa15.19■□□□□ 0.02
HPS3-202ENST00000460120 ZNF506Q5JVG8 444 aa15.19■□□□□ 0.02
HPS3-202ENST00000460120 RPRMLQ8N4K4 120 aa15.19■□□□□ 0.02
HPS3-202ENST00000460120 TAAR6Q96RI8 345 aa15.19■□□□□ 0.02
HPS3-202ENST00000460120 TMPRSS5Q9H3S3 457 aa15.19■□□□□ 0.02
HPS3-202ENST00000460120 IGHV1-18A0A0C4DH31 117 aa15.18■□□□□ 0.02
HPS3-202ENST00000460120 BTBD17A6NE02 478 aa15.18■□□□□ 0.02
HPS3-202ENST00000460120 OOEPA6NGQ2 149 aa15.18■□□□□ 0.02
HPS3-202ENST00000460120 TMEM210A6NLX4 147 aa15.18■□□□□ 0.02
HPS3-202ENST00000460120 LINC00473A8K010 186 aa15.18■□□□□ 0.02
HPS3-202ENST00000460120 SLC25A6P12236 298 aa15.18■□□□□ 0.02
HPS3-202ENST00000460120 EGR1P18146 543 aa15.18■□□□□ 0.02
HPS3-202ENST00000460120 AGAP20933 346 aa15.18■□□□□ 0.02
HPS3-202ENST00000460120 SLC25A22Q9H936 323 aa15.18■□□□□ 0.02
HPS3-202ENST00000460120 INTS1Q8N201 2190 aaKnown RBP15.18■□□□□ 0.02
HPS3-202ENST00000460120 CHD3Q12873 2000 aaKnown RBP15.18■□□□□ 0.02
HPS3-202ENST00000460120 HEATR1Q9H583 2144 aaKnown RBP15.18■□□□□ 0.02
HPS3-202ENST00000460120 TGIF2-C20orf24A0A0A6YYL0 155 aa15.18■□□□□ 0.02
HPS3-202ENST00000460120 A0A1B0GW64 132 aa15.18■□□□□ 0.02
HPS3-202ENST00000460120 HBE1P02100 147 aa15.18■□□□□ 0.02
HPS3-202ENST00000460120 CXCL1P09341 107 aa15.18■□□□□ 0.02
HPS3-202ENST00000460120 BRWD1-AS2P59051 145 aa15.18■□□□□ 0.02
HPS3-202ENST00000460120 ZNF674Q2M3X9 581 aa15.18■□□□□ 0.02
HPS3-202ENST00000460120 CD177Q8N6Q3 437 aa15.18■□□□□ 0.02
HPS3-202ENST00000460120 DCHS1Q96JQ0 3298 aa15.18■□□□□ 0.02
HPS3-202ENST00000460120 IGHV2OR16-5A0A0B4J2B6 119 aa15.17■□□□□ 0.02
HPS3-202ENST00000460120 LOC102723971A0A1B0GUV8 181 aa15.17■□□□□ 0.02
HPS3-202ENST00000460120 C5orf52A6NGY3 159 aa15.17■□□□□ 0.02
HPS3-202ENST00000460120 RNF212BA8MTL3 300 aa15.17■□□□□ 0.02
HPS3-202ENST00000460120 BMP5P22003 454 aa15.17■□□□□ 0.02
HPS3-202ENST00000460120 MSMPQ1L6U9 139 aa15.17■□□□□ 0.02
HPS3-202ENST00000460120 ACSF3Q4G176 576 aaPredicted RBP15.17■□□□□ 0.02
HPS3-202ENST00000460120 FAM201AQ5SY85 155 aa15.17■□□□□ 0.02
HPS3-202ENST00000460120 WDR61Q9GZS3 305 aaKnown RBP15.17■□□□□ 0.02
HPS3-202ENST00000460120 HES4Q9HCC6 221 aa15.17■□□□□ 0.02
HPS3-202ENST00000460120 ASCL3Q9NQ33 180 aa15.17■□□□□ 0.02
HPS3-202ENST00000460120 TRAV17A0A0B4J275 112 aa15.17■□□□□ 0.02
HPS3-202ENST00000460120 IGKV1D-33P01593 117 aa15.17■□□□□ 0.02
HPS3-202ENST00000460120 IGKV1-33P01594 117 aa15.17■□□□□ 0.02
HPS3-202ENST00000460120 BTF3P20290 206 aaKnown RBP15.17■□□□□ 0.02
HPS3-202ENST00000460120 LRRC75BQ2VPJ9 315 aa15.17■□□□□ 0.02
HPS3-202ENST00000460120 ZNF718Q3SXZ3 478 aa15.17■□□□□ 0.02
HPS3-202ENST00000460120 VKORC1L1Q8N0U8 176 aa15.17■□□□□ 0.02
HPS3-202ENST00000460120 Q8WTZ3 238 aa15.17■□□□□ 0.02
HPS3-202ENST00000460120 LEAP2Q969E1 77 aa15.17■□□□□ 0.02
HPS3-202ENST00000460120 SARAFQ96BY9 339 aa15.17■□□□□ 0.02
HPS3-202ENST00000460120 J3QW42 95 aa15.16■□□□□ 0.02
HPS3-202ENST00000460120 M0R1B8 84 aa15.16■□□□□ 0.02
HPS3-202ENST00000460120 HSPB1P04792 205 aaKnown RBP15.16■□□□□ 0.02
HPS3-202ENST00000460120 CD200P41217 278 aa15.16■□□□□ 0.02
HPS3-202ENST00000460120 MUCL1Q96DR8 90 aa15.16■□□□□ 0.02
HPS3-202ENST00000460120 TVP23CQ96ET8 276 aa15.16■□□□□ 0.02
HPS3-202ENST00000460120 UNKLQ9H9P5 680 aaKnown RBP15.16■□□□□ 0.02
HPS3-202ENST00000460120 PROCRQ9UNN8 238 aa15.16■□□□□ 0.02
HPS3-202ENST00000460120 MAP1LC3B2A6NCE7 125 aa15.16■□□□□ 0.02
HPS3-202ENST00000460120 PAX6P26367 422 aa15.16■□□□□ 0.02
HPS3-202ENST00000460120 EDDM3BP56851 147 aa15.16■□□□□ 0.02
HPS3-202ENST00000460120 ERVFRD-1P60508 538 aa15.16■□□□□ 0.02
HPS3-202ENST00000460120 TFF3Q07654 80 aa15.16■□□□□ 0.02
HPS3-202ENST00000460120 RNF212Q495C1 297 aa15.16■□□□□ 0.02
HPS3-202ENST00000460120 TAF15Q92804 592 aaKnown RBP eCLIP15.16■□□□□ 0.02
HPS3-202ENST00000460120 MAP1LC3BQ9GZQ8 125 aa15.16■□□□□ 0.02
HPS3-202ENST00000460120 TUBA4BQ9H853 241 aa15.16■□□□□ 0.02
HPS3-202ENST00000460120 GVINP1Q7Z2Y8 2422 aa15.16■□□□□ 0.02
HPS3-202ENST00000460120 PRR33A8MZF0 331 aa15.16■□□□□ 0.02
HPS3-202ENST00000460120 IFNA4P05014 189 aa15.16■□□□□ 0.02
HPS3-202ENST00000460120 SLC35E4Q6ICL7 350 aa15.16■□□□□ 0.02
HPS3-202ENST00000460120 H2BFWTQ7Z2G1 175 aa15.16■□□□□ 0.02
HPS3-202ENST00000460120 ZNRF1Q8ND25 227 aa15.16■□□□□ 0.02
HPS3-202ENST00000460120 LRRC30A6NM36 301 aa15.15■□□□□ 0.02
HPS3-202ENST00000460120 BCL2P10415 239 aa15.15■□□□□ 0.02
HPS3-202ENST00000460120 COX5AP20674 150 aa15.15■□□□□ 0.02
HPS3-202ENST00000460120 GUSBP1Q15486 140 aa15.15■□□□□ 0.02
HPS3-202ENST00000460120 SMIM21Q3B7S5 101 aa15.15■□□□□ 0.02
HPS3-202ENST00000460120 GATAD1Q8WUU5 269 aa15.15■□□□□ 0.02
HPS3-202ENST00000460120 STARD4Q96DR4 205 aa15.15■□□□□ 0.02
HPS3-202ENST00000460120 GNG12Q9UBI6 72 aa15.15■□□□□ 0.02
HPS3-202ENST00000460120 AQP7O14520 342 aa15.15■□□□□ 0.02
HPS3-202ENST00000460120 SPRY3O43610 288 aa15.15■□□□□ 0.02
HPS3-202ENST00000460120 TNFSF13O75888 250 aa15.15■□□□□ 0.02
HPS3-202ENST00000460120 SELLP14151 372 aa15.15■□□□□ 0.02
HPS3-202ENST00000460120 MDKP21741 143 aaPredicted RBP15.15■□□□□ 0.02
HPS3-202ENST00000460120 CATR1Q13166 79 aa15.15■□□□□ 0.02
HPS3-202ENST00000460120 UTF1Q5T230 341 aa15.15■□□□□ 0.02
HPS3-202ENST00000460120 BHLHA15Q7RTS1 189 aaPredicted RBP15.15■□□□□ 0.02
HPS3-202ENST00000460120 DTD1Q8TEA8 209 aa15.15■□□□□ 0.02
HPS3-202ENST00000460120 LHX4Q969G2 390 aa15.15■□□□□ 0.02
HPS3-202ENST00000460120 SLC39A9Q9NUM3 307 aa15.15■□□□□ 0.02
HPS3-202ENST00000460120 DKK4Q9UBT3 224 aa15.15■□□□□ 0.02
HPS3-202ENST00000460120 SPTBN2O15020 2390 aa15.14■□□□□ 0.01
HPS3-202ENST00000460120 CYB5BO43169 146 aa15.14■□□□□ 0.01
HPS3-202ENST00000460120 YIF1AO95070 293 aa15.14■□□□□ 0.01
HPS3-202ENST00000460120 FGF7P21781 194 aa15.14■□□□□ 0.01
HPS3-202ENST00000460120 PRDX2P32119 198 aa15.14■□□□□ 0.01
HPS3-202ENST00000460120 MSMO1Q15800 293 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms