RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 LILRB4Q8NHJ6 448 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 COQ8AQ8NI60 647 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 LINC01560Q8TB33 94 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 MRPL30Q8TCC3 161 aaKnown RBP3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZFAND1Q8TCF1 268 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZNF431Q8TF32 576 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 CASTOR1Q8WTX7 329 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 RRNAD1Q96FB5 475 aaKnown RBP3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 PHB2Q99623 299 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 PDCD10Q9BUL8 212 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 FXYD6Q9H0Q3 95 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 TLNRD1Q9H1K6 362 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 GHITMQ9H3K2 345 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 HES4Q9HCC6 221 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 RANGRFQ9HD47 186 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 Q9N2K0 584 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 RASL12Q9NYN1 266 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 KCNIP1Q9NZI2 227 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 COMMD9Q9P000 198 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZNF581Q9P0T4 197 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 IL19Q9UHD0 177 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 VSIG4Q9Y279 399 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 WIPI2Q9Y4P8 454 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 RBM7Q9Y580 266 aaKnown RBP3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 NPTNQ9Y639 398 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 DYSFO75923 2080 aa3.12□□□□□ -1.91
HMGB3P20-201ENST00000417997 WDFY3Q8IZQ1 3526 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 SVILO95425 2214 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 IGKV1D-8A0A087WSZ0 117 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 MEIKINA0A087WXM9 373 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 A0A087X0M5 115 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 TRBV6-6A0A0A6YYG2 114 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 TRAV38-1A0A0B4J264 116 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 TEX13DA0A0J9YY54 714 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 A0A1B0GWJ7 208 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 A0A1B0GX30 115 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 A0A1W2PPH5 198 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 OOEPA6NGQ2 149 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR5H14A6NHG9 310 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 RFPL4AA6NLU0 287 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR2AT4A6NND4 320 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 SHISA9B4DS77 424 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 TRDCB7Z8K6 153 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 E7EQL1 145 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 RFPL4AL1F8VTS6 287 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 PTBP3O95758 552 aaKnown RBP3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 NAPSAO96009 420 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 CYB5R3P00387 301 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 PPYP01298 95 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 CTSDP07339 412 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 CD55P08174 381 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 CTXN2P0C2S0 81 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 GSTT2P0CG29 244 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 SULT1A3P0DMM9 295 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 SULT1A4P0DMN0 295 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 NFYAP23511 347 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 DNASE1P24855 282 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 IL2RGP31785 369 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 FCGR2CP31995 323 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 EDDM3BP56851 147 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 CCL8P80075 99 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 CD300CQ08708 224 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 DHRS2Q13268 280 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 PPP1R1AQ13522 171 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZNF146Q15072 292 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 SURF2Q15527 256 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 SLC9A3R2Q15599 337 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 TMEM128Q5BJH2 165 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 KRBOX4Q5JUW0 171 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 LPCAT3Q6P1A2 487 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 FAHD2BQ6P2I3 314 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 Q6P435 159 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZNF497Q6ZNH5 498 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 Q6ZS49 121 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 KCTD9Q7L273 389 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 SLC36A1Q7Z2H8 476 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 SLC25A42Q86VD7 318 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 LHFPL1Q86WI0 220 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 SGPP2Q8IWX5 399 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 SLC38A6Q8IZM9 456 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 TCTE3Q8IZS6 198 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 MUC15Q8N387 334 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 GCSAMQ8N6F7 178 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 ADAD2Q8NCV1 583 aaKnown RBP3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 TMEM185AQ8NFB2 350 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR4A4PQ8NGN8 299 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR10J5Q8NHC4 309 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 TERB2Q8NHR7 220 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 PLPPR1Q8TBJ4 325 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 CAPSLQ8WWF8 208 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 ITLN2Q8WWU7 325 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 IL1F10Q8WWZ1 152 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 MOB3AQ96BX8 217 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 FAHD2AQ96GK7 314 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 CYYR1Q96J86 154 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 FAM210AQ96ND0 272 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 DHRS9Q9BPW9 319 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 CHIAQ9BZP6 476 aa3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZNF436Q9C0F3 470 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P20-201ENST00000417997 SLC5A7Q9GZV3 580 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms