RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 TINAGL1Q9GZM7 467 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-203ENST00000409225 OAZ3Q9UMX2 235 aa12.55□□□□□ -0.4
CHMP3-203ENST00000409225 A0A0B4J203 849 aa12.54□□□□□ -0.4
CHMP3-203ENST00000409225 AIREO43918 545 aa12.54□□□□□ -0.4
CHMP3-203ENST00000409225 XAF1Q6GPH4 301 aa12.54□□□□□ -0.4
CHMP3-203ENST00000409225 SIGIRRQ6IA17 410 aa12.54□□□□□ -0.4
CHMP3-203ENST00000409225 JAGN1Q8N5M9 183 aa12.54□□□□□ -0.4
CHMP3-203ENST00000409225 DRAXINQ8NBI3 349 aaPredicted RBP12.54□□□□□ -0.4
CHMP3-203ENST00000409225 COA4Q9NYJ1 87 aa12.54□□□□□ -0.4
CHMP3-203ENST00000409225 ABRACLQ9P1F3 81 aa12.54□□□□□ -0.4
CHMP3-203ENST00000409225 FAM90A7PA6NKC0 464 aa12.53□□□□□ -0.4
CHMP3-203ENST00000409225 SAC3D1A6NKF1 404 aa12.53□□□□□ -0.4
CHMP3-203ENST00000409225 FAM90A23PA8MXZ1 464 aa12.53□□□□□ -0.4
CHMP3-203ENST00000409225 H3BNX3 289 aa12.53□□□□□ -0.4
CHMP3-203ENST00000409225 GPX5O75715 221 aa12.53□□□□□ -0.4
CHMP3-203ENST00000409225 CRTAPO75718 401 aaPredicted RBP12.53□□□□□ -0.4
CHMP3-203ENST00000409225 SPDEFO95238 335 aa12.53□□□□□ -0.4
CHMP3-203ENST00000409225 IGKV1-16P04430 117 aa12.53□□□□□ -0.4
CHMP3-203ENST00000409225 GLAP06280 429 aa12.53□□□□□ -0.4
CHMP3-203ENST00000409225 MGMTP16455 207 aa12.53□□□□□ -0.4
CHMP3-203ENST00000409225 LGALS7P47929 136 aa12.53□□□□□ -0.4
CHMP3-203ENST00000409225 SSBP2P81877 361 aaPredicted RBP12.53□□□□□ -0.4
CHMP3-203ENST00000409225 HMGN3Q15651 99 aa12.53□□□□□ -0.4
CHMP3-203ENST00000409225 AWAT2Q6E213 333 aa12.53□□□□□ -0.4
CHMP3-203ENST00000409225 CCDC197Q8NCU1 140 aa12.53□□□□□ -0.4
CHMP3-203ENST00000409225 OR13C5Q8NGS8 318 aa12.53□□□□□ -0.4
CHMP3-203ENST00000409225 SNAPC3Q92966 411 aa12.53□□□□□ -0.4
CHMP3-203ENST00000409225 KCTD12Q96CX2 325 aaKnown RBP12.53□□□□□ -0.4
CHMP3-203ENST00000409225 USMG5Q96IX5 58 aa12.53□□□□□ -0.4
CHMP3-203ENST00000409225 AMBNQ9NP70 447 aa12.53□□□□□ -0.4
CHMP3-203ENST00000409225 KLK5Q9Y337 293 aaPredicted RBP12.53□□□□□ -0.4
CHMP3-203ENST00000409225 LRRC42Q9Y546 428 aa12.53□□□□□ -0.4
CHMP3-203ENST00000409225 AP4S1Q9Y587 144 aa12.53□□□□□ -0.4
CHMP3-203ENST00000409225 PDCD6O75340 191 aa12.52□□□□□ -0.41
CHMP3-203ENST00000409225 RBMXL2O75526 392 aaKnown RBP12.52□□□□□ -0.41
CHMP3-203ENST00000409225 IGFBP3P17936 291 aaPredicted RBP12.52□□□□□ -0.41
CHMP3-203ENST00000409225 PJVKQ0ZLH3 352 aa12.52□□□□□ -0.41
CHMP3-203ENST00000409225 DEFB114Q30KQ6 69 aa12.52□□□□□ -0.41
CHMP3-203ENST00000409225 RPL22L1Q6P5R6 122 aaKnown RBP12.52□□□□□ -0.41
CHMP3-203ENST00000409225 WDR89Q96FK6 387 aaPredicted RBP12.52□□□□□ -0.41
CHMP3-203ENST00000409225 Q96M66 194 aa12.52□□□□□ -0.41
CHMP3-203ENST00000409225 GGTLC1Q9BX51 225 aa12.52□□□□□ -0.41
CHMP3-203ENST00000409225 SELENOKQ9Y6D0 94 aa12.52□□□□□ -0.41
CHMP3-203ENST00000409225 DNAH6Q9C0G6 4158 aa12.52□□□□□ -0.41
CHMP3-203ENST00000409225 VPS13DQ5THJ4 4388 aa12.52□□□□□ -0.41
CHMP3-203ENST00000409225 TRAV8-7A0A075B6U6 113 aa12.51□□□□□ -0.41
CHMP3-203ENST00000409225 BMPR1BO00238 502 aa12.51□□□□□ -0.41
CHMP3-203ENST00000409225 APELAP0DMC3 54 aa12.51□□□□□ -0.41
CHMP3-203ENST00000409225 EDN2P20800 178 aa12.51□□□□□ -0.41
CHMP3-203ENST00000409225 LINC00205P59089 165 aa12.51□□□□□ -0.41
CHMP3-203ENST00000409225 ZIK1Q3SY52 487 aaPredicted RBP12.51□□□□□ -0.41
CHMP3-203ENST00000409225 OR14A2Q96R54 314 aa12.51□□□□□ -0.41
CHMP3-203ENST00000409225 CKLFQ9UBR5 152 aa12.51□□□□□ -0.41
CHMP3-203ENST00000409225 FCGR1AP12314 374 aa12.5□□□□□ -0.41
CHMP3-203ENST00000409225 SLC16A13Q7RTY0 426 aa12.5□□□□□ -0.41
CHMP3-203ENST00000409225 LYG2Q86SG7 212 aa12.5□□□□□ -0.41
CHMP3-203ENST00000409225 ZNF383Q8NA42 475 aa12.5□□□□□ -0.41
CHMP3-203ENST00000409225 OR52I1Q8NGK6 324 aa12.5□□□□□ -0.41
CHMP3-203ENST00000409225 FAM46BQ96A09 425 aa12.5□□□□□ -0.41
CHMP3-203ENST00000409225 TMEM68Q96MH6 324 aa12.5□□□□□ -0.41
CHMP3-203ENST00000409225 SULT4A1Q9BR01 284 aa12.5□□□□□ -0.41
CHMP3-203ENST00000409225 ZC4H2Q9NQZ6 224 aa12.5□□□□□ -0.41
CHMP3-203ENST00000409225 LOC102724200A0A096LPH7 203 aaPredicted RBP12.49□□□□□ -0.41
CHMP3-203ENST00000409225 NDUFB8O95169 186 aa12.49□□□□□ -0.41
CHMP3-203ENST00000409225 TNFRSF9Q07011 255 aa12.49□□□□□ -0.41
CHMP3-203ENST00000409225 EXOSC2Q13868 293 aaKnown RBP12.49□□□□□ -0.41
CHMP3-203ENST00000409225 CCDC58Q4VC31 144 aa12.49□□□□□ -0.41
CHMP3-203ENST00000409225 LGALS9CQ6DKI2 356 aa12.49□□□□□ -0.41
CHMP3-203ENST00000409225 SETD6Q8TBK2 473 aa12.49□□□□□ -0.41
CHMP3-203ENST00000409225 SLC7A6OSQ96CW6 309 aaPredicted RBP12.49□□□□□ -0.41
CHMP3-203ENST00000409225 CENPNQ96H22 339 aaPredicted RBP12.49□□□□□ -0.41
CHMP3-203ENST00000409225 PHB2Q99623 299 aa12.49□□□□□ -0.41
CHMP3-203ENST00000409225 AGMATQ9BSE5 352 aa12.49□□□□□ -0.41
CHMP3-203ENST00000409225 CHMP1AQ9HD42 196 aaPredicted RBP12.49□□□□□ -0.41
CHMP3-203ENST00000409225 ORC6Q9Y5N6 252 aa12.49□□□□□ -0.41
CHMP3-203ENST00000409225 A0A1W2PPK0 400 aa12.48□□□□□ -0.41
CHMP3-203ENST00000409225 C2orf70A6NJV1 201 aa12.48□□□□□ -0.41
CHMP3-203ENST00000409225 PROP1O75360 226 aa12.48□□□□□ -0.41
CHMP3-203ENST00000409225 APOA2P02652 100 aa12.48□□□□□ -0.41
CHMP3-203ENST00000409225 LIMS3P0CW19 117 aa12.48□□□□□ -0.41
CHMP3-203ENST00000409225 LIMS4P0CW20 117 aa12.48□□□□□ -0.41
CHMP3-203ENST00000409225 FOLR2P14207 255 aa12.48□□□□□ -0.41
CHMP3-203ENST00000409225 GABRB1P18505 474 aa12.48□□□□□ -0.41
CHMP3-203ENST00000409225 KIR2DS2P43631 304 aa12.48□□□□□ -0.41
CHMP3-203ENST00000409225 PDPNQ86YL7 162 aa12.48□□□□□ -0.41
CHMP3-203ENST00000409225 NEDD4LQ96PU5 975 aa12.48□□□□□ -0.41
CHMP3-203ENST00000409225 FAAP24Q9BTP7 215 aa12.48□□□□□ -0.41
CHMP3-203ENST00000409225 C11orf54Q9H0W9 315 aaPredicted RBP12.48□□□□□ -0.41
CHMP3-203ENST00000409225 OR1A1Q9P1Q5 309 aa12.48□□□□□ -0.41
CHMP3-203ENST00000409225 TRBV5-5A0A0J9YX44 114 aa12.47□□□□□ -0.41
CHMP3-203ENST00000409225 IGLV2-23P01705 113 aa12.47□□□□□ -0.41
CHMP3-203ENST00000409225 SVOPQ8N4V2 548 aa12.47□□□□□ -0.41
CHMP3-203ENST00000409225 SMIM19Q96E16 107 aa12.47□□□□□ -0.41
CHMP3-203ENST00000409225 AKIP1Q9NQ31 210 aa12.47□□□□□ -0.41
CHMP3-203ENST00000409225 TECRQ9NZ01 308 aaKnown RBP12.47□□□□□ -0.41
CHMP3-203ENST00000409225 ZNF230Q9UIE0 474 aaPredicted RBP12.47□□□□□ -0.41
CHMP3-203ENST00000409225 ABCA13Q86UQ4 5058 aa12.47□□□□□ -0.41
CHMP3-203ENST00000409225 ITGB1BP1O14713 200 aa12.46□□□□□ -0.41
CHMP3-203ENST00000409225 PRH1P02810 166 aa12.46□□□□□ -0.41
CHMP3-203ENST00000409225 ALPLP05186 524 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms