RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 TRAV40A0A0B4J280 105 aa11.45□□□□□ -0.58
HERPUD1-203ENST00000379792 BUB1B-PAK6H3BSN5 160 aa11.45□□□□□ -0.58
HERPUD1-203ENST00000379792 M0R1X1 148 aa11.45□□□□□ -0.58
HERPUD1-203ENST00000379792 RAB29O14966 203 aa11.45□□□□□ -0.58
HERPUD1-203ENST00000379792 IGHV4-38-2P0DP08 117 aa11.45□□□□□ -0.58
HERPUD1-203ENST00000379792 RIPPLY3P57055 190 aa11.45□□□□□ -0.58
HERPUD1-203ENST00000379792 KRTAP1-1Q07627 177 aa11.45□□□□□ -0.58
HERPUD1-203ENST00000379792 RUSC1-AS1Q66K80 236 aa11.45□□□□□ -0.58
HERPUD1-203ENST00000379792 BEND2Q8NDZ0 799 aa11.45□□□□□ -0.58
HERPUD1-203ENST00000379792 C17orf50Q8WW18 174 aa11.45□□□□□ -0.58
HERPUD1-203ENST00000379792 SMR3AQ99954 134 aa11.45□□□□□ -0.58
HERPUD1-203ENST00000379792 ZNF251Q9BRH9 671 aa11.45□□□□□ -0.58
HERPUD1-203ENST00000379792 ODF3BA8MYP8 253 aa11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 J3QLI3 93 aa11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 PEX14O75381 377 aa11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 PGLYRP1O75594 196 aaPredicted RBP11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 UBE2E1P51965 193 aa11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 BRD3OSQ6XYD6 125 aa11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 SLC25A42Q86VD7 318 aa11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 CMTM1Q8IZ96 169 aa11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 BVESQ8NE79 360 aa11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 PIPOXQ9P0Z9 390 aa11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 TEX13DA0A0J9YY54 714 aaPredicted RBP11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 RPL30P62888 115 aaKnown RBP11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 KLF17Q5JT82 389 aaPredicted RBP11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 GLDNQ6ZMI3 551 aaPredicted RBP11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 TBC1D26Q86UD7 250 aa11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 PIP4P2Q8N4L2 257 aa11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 MINDY2Q8NBR6 621 aa11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 OR52B4Q8NGK2 314 aa11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 OR51H1Q8NH63 302 aa11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 RTN4IP1Q8WWV3 396 aaPredicted RBP11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 ST6GALNAC6Q969X2 333 aa11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 AKR1E2Q96JD6 320 aa11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 SEC22CQ9BRL7 303 aa11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 PRR13Q9NZ81 148 aa11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 HILPDAQ9Y5L2 63 aa11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 SOX21Q9Y651 276 aaPredicted RBP11.44□□□□□ -0.58
HERPUD1-203ENST00000379792 SETD2Q9BYW2 2564 aaPredicted RBP11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 A0A0B4J293 547 aa11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 IGHV1-69DA0A0B4J2H0 117 aa11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 NPFFO15130 113 aa11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 MPPED1O15442 326 aa11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 SLC22A5O76082 557 aa11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 IGHV1-69P01742 117 aa11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 VAMP1P23763 118 aa11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 HTR1DP28221 377 aa11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 SAA4P35542 130 aa11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 LGALS4P56470 323 aa11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 PPP1R1AQ13522 171 aa11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 EIF4EBP1Q13541 118 aaPredicted RBP11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 SP6Q3SY56 376 aa11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 C4orf46Q504U0 113 aa11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 OR2B11Q5JQS5 317 aa11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 ZNF833PQ6ZTB9 187 aa11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 ZNF486Q96H40 463 aaPredicted RBP11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 S1PR3Q99500 378 aa11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 MRPL20Q9BYC9 149 aaKnown RBP11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 GSX1Q9H4S2 264 aaPredicted RBP11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 DPM3Q9P2X0 92 aa11.43□□□□□ -0.58
HERPUD1-203ENST00000379792 A0A1B0GVG6 124 aa11.42□□□□□ -0.58
HERPUD1-203ENST00000379792 CRYM-AS1A6NIL9 109 aa11.42□□□□□ -0.58
HERPUD1-203ENST00000379792 LINC00473A8K010 186 aa11.42□□□□□ -0.58
HERPUD1-203ENST00000379792 LY6LH3BQJ8 138 aa11.42□□□□□ -0.58
HERPUD1-203ENST00000379792 OR4E1P0C645 316 aa11.42□□□□□ -0.58
HERPUD1-203ENST00000379792 IL3RAP26951 378 aa11.42□□□□□ -0.58
HERPUD1-203ENST00000379792 SUPT4H1P63272 117 aaKnown RBP11.42□□□□□ -0.58
HERPUD1-203ENST00000379792 SLC9A3R2Q15599 337 aa11.42□□□□□ -0.58
HERPUD1-203ENST00000379792 GPR157Q5UAW9 335 aa11.42□□□□□ -0.58
HERPUD1-203ENST00000379792 DYNAPQ8N1N2 210 aa11.42□□□□□ -0.58
HERPUD1-203ENST00000379792 CCDC71LQ8N9Z2 235 aa11.42□□□□□ -0.58
HERPUD1-203ENST00000379792 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.42□□□□□ -0.58
HERPUD1-203ENST00000379792 FAM216AQ8WUB2 273 aa11.42□□□□□ -0.58
HERPUD1-203ENST00000379792 YAE1D1Q9NRH1 226 aa11.42□□□□□ -0.58
HERPUD1-203ENST00000379792 AMMECR1Q9Y4X0 333 aaPredicted RBP11.42□□□□□ -0.58
HERPUD1-203ENST00000379792 A8MV72 311 aaPredicted RBP11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 LEUTXA8MZ59 168 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 CD5LO43866 347 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 DHFRP00374 187 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 CT45A6P0DMU7 189 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 CT45A5P0DMU8 189 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 CT45A7P0DMV0 189 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 S100GP29377 79 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 DUTP33316 252 aaKnown RBP11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 ZNF137PP52743 207 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 RND3P61587 244 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 SSX2Q16385 188 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 TATDN3Q17R31 274 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 TMEM128Q5BJH2 165 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 TPTE2P1Q5T6R2 138 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 CLEC9AQ6UXN8 241 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 Q6ZNX1 250 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 SGPP2Q8IWX5 399 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 ZBTB34Q8NCN2 500 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 CASTOR1Q8WTX7 329 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 TCTEX1D2Q8WW35 142 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 RPEQ96AT9 228 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 TP53RKQ96S44 253 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 NAA60Q9H7X0 242 aa11.41□□□□□ -0.58
HERPUD1-203ENST00000379792 GAB2Q9UQC2 676 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms