RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 NAA38Q9BRA0 125 aaKnown RBP9.39□□□□□ -0.91
USP6NL-202ENST00000379237 TRAPPC2LQ9UL33 140 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 PLXNB2O15031 1838 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 IGKV1-9A0A0C4DH69 117 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 MUC21A0A0G2JKD1 596 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 MUC21A0A140T8X8 626 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 M0R296 226 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 TNFP01375 233 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 F2RP25116 425 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 PAX2Q02962 417 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 ZNF816Q0VGE8 651 aaPredicted RBP9.39□□□□□ -0.91
USP6NL-202ENST00000379237 ACSF3Q4G176 576 aaPredicted RBP9.39□□□□□ -0.91
USP6NL-202ENST00000379237 MUC21Q5SSG8 566 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 ZDHHC23Q8IYP9 409 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 FAM89BQ8N5H3 189 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 ENY2Q9NPA8 101 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 CLEC5AQ9NY25 188 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 IL36BQ9NZH7 164 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 MED12Q93074 2177 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 OR4C46A6NHA9 309 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 DEGS1O15121 323 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 SAP30O75446 220 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 CA3P07451 260 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 GFRA1P56159 465 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 DEFB103AP81534 67 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 FOXL1Q12952 345 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 DHRS13Q6UX07 377 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 SVIPQ8NHG7 77 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 KLHDC7BQ96G42 594 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 IL23AQ9NPF7 189 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 LIN7CQ9NUP9 197 aaKnown RBP9.39□□□□□ -0.91
USP6NL-202ENST00000379237 POLR2AP24928 1970 aaKnown RBP9.39□□□□□ -0.91
USP6NL-202ENST00000379237 ZNF106Q9H2Y7 1883 aaKnown RBP9.39□□□□□ -0.91
USP6NL-202ENST00000379237 SPINT1O43278 529 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 GALR2O43603 387 aaPredicted RBP9.39□□□□□ -0.91
USP6NL-202ENST00000379237 SRSF10O75494 262 aaKnown RBP9.39□□□□□ -0.91
USP6NL-202ENST00000379237 SCTP09683 121 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 HTR1DP28221 377 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 AESQ08117 197 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 FAM69BQ5VUD6 431 aa9.39□□□□□ -0.91
USP6NL-202ENST00000379237 TMEM50AO95807 157 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 COX19Q49B96 90 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 KIAA0895LQ68EN5 471 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 OR10W1Q8NGF6 305 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 TRIB1Q96RU8 372 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 SIGMAR1Q99720 223 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 FAM60AQ9NP50 221 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 ALKBH4Q9NXW9 302 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 HS3ST3A1Q9Y663 406 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 LHFPL6Q9Y693 200 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 C7orf71A4D174 169 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 F2Z2F3 143 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 ACTL6BO94805 426 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 EPHA8P29322 1005 aaPredicted RBP9.38□□□□□ -0.91
USP6NL-202ENST00000379237 GPM6AP51674 278 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 C17orf67Q0P5P2 114 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 FOXF1Q12946 379 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 CLUHP3Q96NS8 147 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 WDR54Q9H977 334 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 HCFC2Q9Y5Z7 792 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 PLXNB3Q9ULL4 1909 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 H3BUT2 72 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 CA7P43166 264 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 PPOXP50336 477 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 PPP1CAP62136 330 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 ZNF726P1Q15940 193 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 H2BFWTQ7Z2G1 175 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 KCNIP1Q9NZI2 227 aa9.38□□□□□ -0.91
USP6NL-202ENST00000379237 FRG2CA6NGY1 282 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 HLA-DQA1P01909 254 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 HIST1H1EP10412 219 aaKnown RBP9.37□□□□□ -0.91
USP6NL-202ENST00000379237 CD46P15529 392 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 CD38P28907 300 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 ZFP36L1Q07352 338 aaKnown RBP9.37□□□□□ -0.91
USP6NL-202ENST00000379237 TMEM211Q6ICI0 200 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 CLDN23Q96B33 292 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 MRGPRX1Q96LB2 322 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 KCNK17Q96T54 332 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 LINC00869P0C866 280 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 MFAP2P55001 183 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 PSG9Q00887 426 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 LRRC10Q5BKY1 277 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 TM4SF19Q96DZ7 209 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 KLHDC3Q9BQ90 382 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 KIF26AQ9ULI4 1882 aaPredicted RBP9.37□□□□□ -0.91
USP6NL-202ENST00000379237 CA2P00918 260 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 SMIM10L1P0DMW3 83 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 SMIM10Q96HG1 83 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 LIME1Q9H400 295 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 SERGEFQ9UGK8 458 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 ALG1L2C9J202 215 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 H0Y980 276 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 ESDP10768 282 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 CEBPBP17676 345 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 ZNF77Q15935 545 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 KRTCAP3Q53RY4 240 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 FAM162BQ5T6X4 162 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 FER1L6-AS1Q8NA97 138 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 OR1B1Q8NGR6 318 aa9.37□□□□□ -0.91
USP6NL-202ENST00000379237 SIGLEC12Q96PQ1 595 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms