RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 CLRN3Q8NCR9 226 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 OR13A1Q8NGR1 328 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 FAM213BQ8TBF2 198 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 TCTEX1D2Q8WW35 142 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 CIB3Q96Q77 187 aaPredicted RBP11.7□□□□□ -0.54
USF1-202ENST00000368020 YPEL2Q96QA6 119 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 PARP12Q9H0J9 701 aaKnown RBP11.7□□□□□ -0.54
USF1-202ENST00000368020 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.7□□□□□ -0.54
USF1-202ENST00000368020 PSENENQ9NZ42 101 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 KMT2BQ9UMN6 2715 aaPredicted RBP11.7□□□□□ -0.54
USF1-202ENST00000368020 HIVEP3Q5T1R4 2406 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 FAM90A9PA6NNJ1 464 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 C16orf97H3BN30 126 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 CLDN1O95832 211 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 BMP5P22003 454 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 CA7P43166 264 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 GUK1Q16774 197 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 DHRS7BQ6IAN0 325 aaPredicted RBP11.69□□□□□ -0.54
USF1-202ENST00000368020 RPRMLQ8N4K4 120 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 TMEM217Q8N7C4 229 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 UBALD1Q8TB05 177 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 SCGB1C1Q8TD33 95 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 FAM222BQ8WU58 562 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 C14orf79Q96F83 325 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 PSMG3Q9BT73 122 aaPredicted RBP11.69□□□□□ -0.54
USF1-202ENST00000368020 TMEM231Q9H6L2 316 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 UNKLQ9H9P5 680 aaKnown RBP11.69□□□□□ -0.54
USF1-202ENST00000368020 RNF7Q9UBF6 113 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 HSPB7Q9UBY9 170 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 FAM96BQ9Y3D0 163 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 DIDO1Q9BTC0 2240 aaKnown RBP11.69□□□□□ -0.54
USF1-202ENST00000368020 LOC105371267A0A1B0GV96 52 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 ATP6V1G2-DDX39BF2Z307 99 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 F2RL2O00254 374 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 RAB29O14966 203 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 ATF4P18848 351 aaPredicted RBP11.69□□□□□ -0.54
USF1-202ENST00000368020 SSTR5P35346 364 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 PPP1CCP36873 323 aaKnown RBP11.69□□□□□ -0.54
USF1-202ENST00000368020 KIR2DS2P43631 304 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 RAB7AP51149 207 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 UBE2KP61086 200 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 TNFRSF9Q07011 255 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 GUCA2BQ16661 112 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 PRR14LQ5THK1 2151 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 Q6ZRM9 215 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 MOGAT3Q86VF5 341 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 LRP11Q86VZ4 500 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 ODF3L1Q8IXM7 274 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 Q8TCH9 128 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 RBMXL1Q96E39 390 aaKnown RBP11.69□□□□□ -0.54
USF1-202ENST00000368020 EIF5A2Q9GZV4 153 aaKnown RBP11.69□□□□□ -0.54
USF1-202ENST00000368020 FAM234AQ9H0X4 552 aa11.69□□□□□ -0.54
USF1-202ENST00000368020 VSTM5A8MXK1 200 aa11.68□□□□□ -0.54
USF1-202ENST00000368020 FAM157AC9JC47 383 aa11.68□□□□□ -0.54
USF1-202ENST00000368020 AGPAT2O15120 278 aa11.68□□□□□ -0.54
USF1-202ENST00000368020 P0C879 139 aa11.68□□□□□ -0.54
USF1-202ENST00000368020 EGR1P18146 543 aa11.68□□□□□ -0.54
USF1-202ENST00000368020 TNFAIP6P98066 277 aaPredicted RBP11.68□□□□□ -0.54
USF1-202ENST00000368020 EDDM3AQ14507 147 aa11.68□□□□□ -0.54
USF1-202ENST00000368020 ATP6V1FQ16864 119 aa11.68□□□□□ -0.54
USF1-202ENST00000368020 MSMPQ1L6U9 139 aa11.68□□□□□ -0.54
USF1-202ENST00000368020 ALKBH2Q6NS38 261 aa11.68□□□□□ -0.54
USF1-202ENST00000368020 ITLN1Q8WWA0 313 aa11.68□□□□□ -0.54
USF1-202ENST00000368020 GNG12Q9UBI6 72 aa11.68□□□□□ -0.54
USF1-202ENST00000368020 METRNQ9UJH8 293 aa11.68□□□□□ -0.54
USF1-202ENST00000368020 GAB2Q9UQC2 676 aa11.68□□□□□ -0.54
USF1-202ENST00000368020 LRRC30A6NM36 301 aa11.67□□□□□ -0.54
USF1-202ENST00000368020 RBFOX2O43251 390 aaKnown RBP eCLIP11.67□□□□□ -0.54
USF1-202ENST00000368020 SPRY3O43610 288 aa11.67□□□□□ -0.54
USF1-202ENST00000368020 NXPH3O95157 252 aa11.67□□□□□ -0.54
USF1-202ENST00000368020 H2AFB1P0C5Y9 115 aa11.67□□□□□ -0.54
USF1-202ENST00000368020 IRF2P14316 349 aa11.67□□□□□ -0.54
USF1-202ENST00000368020 GPR12P47775 334 aa11.67□□□□□ -0.54
USF1-202ENST00000368020 ASCL1P50553 236 aa11.67□□□□□ -0.54
USF1-202ENST00000368020 SERF2P84101 59 aa11.67□□□□□ -0.54
USF1-202ENST00000368020 FAM27E3Q08E93 113 aa11.67□□□□□ -0.54
USF1-202ENST00000368020 VHLLQ6RSH7 139 aa11.67□□□□□ -0.54
USF1-202ENST00000368020 H2BFWTQ7Z2G1 175 aa11.67□□□□□ -0.54
USF1-202ENST00000368020 LILRB2Q8N423 598 aa11.67□□□□□ -0.54
USF1-202ENST00000368020 ZNF808Q8N4W9 903 aaPredicted RBP11.67□□□□□ -0.54
USF1-202ENST00000368020 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.67□□□□□ -0.54
USF1-202ENST00000368020 SDSLQ96GA7 329 aa11.67□□□□□ -0.54
USF1-202ENST00000368020 BBC3Q96PG8 261 aaPredicted RBP11.67□□□□□ -0.54
USF1-202ENST00000368020 AGMATQ9BSE5 352 aa11.67□□□□□ -0.54
USF1-202ENST00000368020 MRPL37Q9BZE1 423 aaKnown RBP11.67□□□□□ -0.54
USF1-202ENST00000368020 KIAA1456Q9P272 454 aa11.67□□□□□ -0.54
USF1-202ENST00000368020 NDRG3Q9UGV2 375 aa11.67□□□□□ -0.54
USF1-202ENST00000368020 CACNA1DQ01668 2161 aa11.67□□□□□ -0.54
USF1-202ENST00000368020 TRAV1-1A0A0B4J248 108 aa11.66□□□□□ -0.54
USF1-202ENST00000368020 TRGV8A0A0C4DH27 118 aa11.66□□□□□ -0.54
USF1-202ENST00000368020 A0A0G2JNJ9 132 aa11.66□□□□□ -0.54
USF1-202ENST00000368020 TNFRSF1AP19438 455 aa11.66□□□□□ -0.54
USF1-202ENST00000368020 MORN2Q502X0 79 aa11.66□□□□□ -0.54
USF1-202ENST00000368020 ZNF295-AS1Q8N0V1 137 aa11.66□□□□□ -0.54
USF1-202ENST00000368020 RND1Q92730 232 aa11.66□□□□□ -0.54
USF1-202ENST00000368020 SLC35B3Q9H1N7 401 aa11.66□□□□□ -0.54
USF1-202ENST00000368020 NGBQ9NPG2 151 aa11.66□□□□□ -0.54
USF1-202ENST00000368020 KCNJ16Q9NPI9 418 aa11.66□□□□□ -0.54
USF1-202ENST00000368020 JKAMPQ9P055 326 aa11.66□□□□□ -0.54
USF1-202ENST00000368020 Q9UFV3 132 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms