RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 CDIPTO14735 213 aa13.73□□□□□ -0.21
CLSTN1-201ENST00000361311 SLC25A5P05141 298 aaKnown RBP13.73□□□□□ -0.21
CLSTN1-201ENST00000361311 HTR1DP28221 377 aa13.73□□□□□ -0.21
CLSTN1-201ENST00000361311 CCL7P80098 99 aa13.73□□□□□ -0.21
CLSTN1-201ENST00000361311 A0A1B0GW64 132 aa13.73□□□□□ -0.21
CLSTN1-201ENST00000361311 FAM90A26D6RGX4 464 aa13.73□□□□□ -0.21
CLSTN1-201ENST00000361311 OR5AL1P0C617 328 aa13.73□□□□□ -0.21
CLSTN1-201ENST00000361311 GAB4Q2WGN9 574 aa13.73□□□□□ -0.21
CLSTN1-201ENST00000361311 ATOH7Q8N100 152 aa13.73□□□□□ -0.21
CLSTN1-201ENST00000361311 PRSS3P2Q8NHM4 247 aa13.73□□□□□ -0.21
CLSTN1-201ENST00000361311 WNT16Q9UBV4 365 aa13.73□□□□□ -0.21
CLSTN1-201ENST00000361311 PXMP4Q9Y6I8 212 aa13.73□□□□□ -0.21
CLSTN1-201ENST00000361311 RTN4RL2Q86UN3 420 aa13.73□□□□□ -0.21
CLSTN1-201ENST00000361311 FAM122AQ96E09 287 aa13.73□□□□□ -0.21
CLSTN1-201ENST00000361311 MRPL37Q9BZE1 423 aaKnown RBP13.73□□□□□ -0.21
CLSTN1-201ENST00000361311 IL19Q9UHD0 177 aa13.73□□□□□ -0.21
CLSTN1-201ENST00000361311 PMS2P1A4D2B8 440 aa13.72□□□□□ -0.21
CLSTN1-201ENST00000361311 C2CD4DB7Z1M9 353 aa13.72□□□□□ -0.21
CLSTN1-201ENST00000361311 LRRC75BQ2VPJ9 315 aa13.72□□□□□ -0.21
CLSTN1-201ENST00000361311 C19orf35Q6ZS72 473 aa13.72□□□□□ -0.21
CLSTN1-201ENST00000361311 SHISA5Q8N114 240 aa13.72□□□□□ -0.21
CLSTN1-201ENST00000361311 LSM10Q969L4 123 aaKnown RBP13.72□□□□□ -0.21
CLSTN1-201ENST00000361311 RNF2Q99496 336 aa13.72□□□□□ -0.21
CLSTN1-201ENST00000361311 TMEM242Q9NWH2 141 aa13.72□□□□□ -0.21
CLSTN1-201ENST00000361311 OR2D3Q8NGH3 330 aa13.72□□□□□ -0.21
CLSTN1-201ENST00000361311 DEFB127Q9H1M4 99 aa13.72□□□□□ -0.21
CLSTN1-201ENST00000361311 HLA-DQA1P01909 254 aa13.72□□□□□ -0.21
CLSTN1-201ENST00000361311 ZNF718Q3SXZ3 478 aa13.72□□□□□ -0.21
CLSTN1-201ENST00000361311 TEPPQ6URK8 271 aa13.72□□□□□ -0.21
CLSTN1-201ENST00000361311 LINC00596Q86U02 117 aa13.72□□□□□ -0.21
CLSTN1-201ENST00000361311 RFNGQ9Y644 331 aa13.72□□□□□ -0.21
CLSTN1-201ENST00000361311 SRIP30626 198 aa13.71□□□□□ -0.21
CLSTN1-201ENST00000361311 WNT5AP41221 380 aa13.71□□□□□ -0.21
CLSTN1-201ENST00000361311 FNDC7Q5VTL7 733 aa13.71□□□□□ -0.21
CLSTN1-201ENST00000361311 SLC23A3Q6PIS1 610 aa13.71□□□□□ -0.21
CLSTN1-201ENST00000361311 ZNF664Q8N3J9 261 aa13.71□□□□□ -0.21
CLSTN1-201ENST00000361311 ABHD3Q8WU67 409 aa13.71□□□□□ -0.21
CLSTN1-201ENST00000361311 IMMP2LQ96T52 175 aa13.71□□□□□ -0.21
CLSTN1-201ENST00000361311 ZNF319Q9P2F9 582 aa13.71□□□□□ -0.21
CLSTN1-201ENST00000361311 MDC1Q14676 2089 aaKnown RBP13.71□□□□□ -0.21
CLSTN1-201ENST00000361311 IGHV4-34P06331 123 aa13.71□□□□□ -0.21
CLSTN1-201ENST00000361311 DNM1P46Q6ZS02 220 aa13.71□□□□□ -0.21
CLSTN1-201ENST00000361311 RTN4RQ9BZR6 473 aa13.71□□□□□ -0.21
CLSTN1-201ENST00000361311 OR1A1Q9P1Q5 309 aa13.71□□□□□ -0.21
CLSTN1-201ENST00000361311 OOEPA6NGQ2 149 aa13.71□□□□□ -0.21
CLSTN1-201ENST00000361311 CEACAM21Q3KPI0 293 aa13.71□□□□□ -0.21
CLSTN1-201ENST00000361311 PET117Q6UWS5 81 aa13.71□□□□□ -0.21
CLSTN1-201ENST00000361311 MAP1LC3CQ9BXW4 147 aa13.71□□□□□ -0.21
CLSTN1-201ENST00000361311 HES4Q9HCC6 221 aa13.71□□□□□ -0.21
CLSTN1-201ENST00000361311 MPDU1O75352 247 aa13.71□□□□□ -0.22
CLSTN1-201ENST00000361311 MMD2Q8IY49 270 aa13.71□□□□□ -0.22
CLSTN1-201ENST00000361311 H1FXQ92522 213 aaKnown RBP13.71□□□□□ -0.22
CLSTN1-201ENST00000361311 PLA2G3Q9NZ20 509 aa13.71□□□□□ -0.22
CLSTN1-201ENST00000361311 RALGAPA1Q6GYQ0 2036 aa13.71□□□□□ -0.22
CLSTN1-201ENST00000361311 A6NNC1 897 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 DLEU1O43261 78 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 NPIPB7O75200 414 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 LIFP15018 202 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 LYG1Q8N1E2 194 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 OR2V2Q96R30 315 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 TMEM106BQ9NUM4 274 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 GUSBP11Q6P575 273 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 LRTM2Q8N967 370 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 TMEM56Q96MV1 263 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 GLRX2Q9NS18 164 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 TMEM56-RWDD3S4R434 201 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 PROB1E7EW31 1015 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 RAB29O14966 203 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 ZG16O60844 167 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 NPY1RP25929 384 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 MIC13Q5XKP0 118 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 UBALD2Q8IYN6 164 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 OR4D5Q8NGN0 318 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 OR10S1Q8NGN2 331 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 IL36RNQ9UBH0 155 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 SYNGR1O43759 233 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 HAND1O96004 215 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 ZNF525Q8N782 197 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 NPVFQ9HCQ7 196 aa13.7□□□□□ -0.22
CLSTN1-201ENST00000361311 DPRXA6NFQ7 191 aa13.69□□□□□ -0.22
CLSTN1-201ENST00000361311 ZNHIT1O43257 154 aa13.69□□□□□ -0.22
CLSTN1-201ENST00000361311 DNLZQ5SXM8 178 aa13.69□□□□□ -0.22
CLSTN1-201ENST00000361311 BPIFA4PQ86YQ2 179 aa13.69□□□□□ -0.22
CLSTN1-201ENST00000361311 SCCPDHQ8NBX0 429 aa13.69□□□□□ -0.22
CLSTN1-201ENST00000361311 OR4S2Q8NH73 311 aa13.69□□□□□ -0.22
CLSTN1-201ENST00000361311 BLNKQ8WV28 456 aa13.69□□□□□ -0.22
CLSTN1-201ENST00000361311 PLSCR2Q9NRY7 297 aa13.69□□□□□ -0.22
CLSTN1-201ENST00000361311 DNPH1O43598 174 aa13.69□□□□□ -0.22
CLSTN1-201ENST00000361311 ARL14EPLP0DKL9 152 aa13.69□□□□□ -0.22
CLSTN1-201ENST00000361311 ID3Q02535 119 aa13.69□□□□□ -0.22
CLSTN1-201ENST00000361311 FLVCR1-AS1Q8TAF5 88 aa13.69□□□□□ -0.22
CLSTN1-201ENST00000361311 CNOT1A5YKK6 2376 aaKnown RBP13.69□□□□□ -0.22
CLSTN1-201ENST00000361311 IGHV1OR15-9A0A0B4J2B8 117 aa13.69□□□□□ -0.22
CLSTN1-201ENST00000361311 GZMBP10144 247 aa13.69□□□□□ -0.22
CLSTN1-201ENST00000361311 NXPH1P58417 271 aa13.69□□□□□ -0.22
CLSTN1-201ENST00000361311 GABRA6Q16445 453 aa13.69□□□□□ -0.22
CLSTN1-201ENST00000361311 VWA1Q6PCB0 445 aa13.69□□□□□ -0.22
CLSTN1-201ENST00000361311 TIMM9Q9Y5J7 89 aa13.69□□□□□ -0.22
CLSTN1-201ENST00000361311 EP300Q09472 2414 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms