RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 C5orf17Q8NAS9 161 aa13.43□□□□□ -0.26
TRAPPC11-202ENST00000357207 DUSP15Q9H1R2 295 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC11-202ENST00000357207 SPTBN1Q01082 2364 aaKnown RBP13.43□□□□□ -0.26
TRAPPC11-202ENST00000357207 LOC390937A0A1W2PQ73 354 aa13.43□□□□□ -0.26
TRAPPC11-202ENST00000357207 AGFG2O95081 481 aa13.43□□□□□ -0.26
TRAPPC11-202ENST00000357207 IGFBP3P17936 291 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC11-202ENST00000357207 GLRX5Q86SX6 157 aa13.43□□□□□ -0.26
TRAPPC11-202ENST00000357207 OR4B1Q8NGF8 309 aa13.43□□□□□ -0.26
TRAPPC11-202ENST00000357207 THYN1Q9P016 225 aa13.43□□□□□ -0.26
TRAPPC11-202ENST00000357207 RNF7Q9UBF6 113 aa13.43□□□□□ -0.26
TRAPPC11-202ENST00000357207 ZNF646O15015 1829 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC11-202ENST00000357207 A0A087WV48 116 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 IGKV1D-43A0A0B4J1Z2 117 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 LINC00587B1AMM8 73 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 TGFBR3LH3BV60 316 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 TNFRSF9Q07011 255 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 BIVMQ86UB2 503 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 OR8I2Q8N0Y5 310 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 NFAM1Q8NET5 270 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 FLYWCH2Q96CP2 140 aaKnown RBP13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 WNT5AP41221 380 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 PDCD11Q14690 1871 aaKnown RBP13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 PET117Q6UWS5 81 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 OR8G5Q8NG78 346 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 LSM10Q969L4 123 aaKnown RBP13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 PERPQ96FX8 193 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 PSMG3Q9BT73 122 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 SMOC1Q9H4F8 434 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 TRGV8A0A0C4DH27 118 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 A0A1B0GV90 55 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 K7ESF4 209 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 PRDX2P32119 198 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 TUBA4BQ9H853 241 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 PRR32B1ATL7 298 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 LYPD3O95274 346 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 COX7A1P24310 79 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 TGIF2LYQ8IUE0 185 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 ZNF738Q8NE65 137 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 SLC25A28Q96A46 364 aa13.42□□□□□ -0.26
TRAPPC11-202ENST00000357207 CORTO00230 105 aa13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 CLDN14O95500 239 aa13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 SRP19P09132 144 aaKnown RBP13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 SMIM17P0DL12 118 aa13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 HIST1H1BP16401 226 aaKnown RBP13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 TMEM97Q5BJF2 176 aa13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 MIC13Q5XKP0 118 aa13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 SAXO1Q8IYX7 474 aa13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 RCC1LQ96I51 464 aaKnown RBP13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 TM2D1Q9BX74 207 aa13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 MGST3O14880 152 aa13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 COL10A1Q03692 680 aa13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 C10orf128Q5T292 105 aa13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 PKIBQ9C010 78 aa13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 A0A1W2PPE3 182 aa13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 HLA-DQA1P01909 254 aa13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 PQLC2Q6ZP29 291 aa13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 OR1L1Q8NH94 360 aa13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 CBLN4Q9NTU7 201 aa13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 HSPB8Q9UJY1 196 aa13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 WIPI2Q9Y4P8 454 aa13.41□□□□□ -0.26
TRAPPC11-202ENST00000357207 TRIOBPQ9H2D6 2365 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 ZNF729A6NN14 1252 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 H0YIZ8 118 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 FGF16O43320 207 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 DCAF10Q5QP82 559 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 TMEM183AQ8IXX5 376 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 ZNF645Q8N7E2 425 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 FAM216AQ8WUB2 273 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 MRPL18Q9H0U6 180 aaKnown RBP13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 OR51B2Q9Y5P1 312 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 NYNRINQ9P2P1 1898 aaKnown RBP13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 ARHGEF17Q96PE2 2063 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 BRCA1P38398 1863 aaKnown RBP13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 A8MWL6 223 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 RAB29O14966 203 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 ZNF137PP52743 207 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 IBA57Q5T440 356 aaKnown RBP13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 HES3Q5TGS1 186 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 BPIFA4PQ86YQ2 179 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 SLC25A45Q8N413 288 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 GFI1Q99684 422 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 IL36RNQ9UBH0 155 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 HEATR5BQ9P2D3 2071 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 IFITM10A6NMD0 228 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 C21orf140B9A014 251 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 SCGB1C2P0DMR2 95 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 GFRALQ6UXV0 394 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 BHLHA15Q7RTS1 189 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 PAXXQ9BUH6 204 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 PRDM14Q9GZV8 571 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 WNT5BQ9H1J7 359 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 SPTBN2O15020 2390 aa13.4□□□□□ -0.26
TRAPPC11-202ENST00000357207 ZG16O60844 167 aa13.4□□□□□ -0.27
TRAPPC11-202ENST00000357207 RAMP1O60894 148 aa13.4□□□□□ -0.27
TRAPPC11-202ENST00000357207 HOXA5P20719 270 aa13.4□□□□□ -0.27
TRAPPC11-202ENST00000357207 GNB2P62879 340 aa13.4□□□□□ -0.27
TRAPPC11-202ENST00000357207 ONECUT1Q9UBC0 465 aa13.4□□□□□ -0.27
TRAPPC11-202ENST00000357207 F8VVB4 439 aa13.39□□□□□ -0.27
TRAPPC11-202ENST00000357207 F8VWA3 439 aa13.39□□□□□ -0.27
TRAPPC11-202ENST00000357207 K7ERU9 68 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms