RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 ZNF843Q8N446 348 aa15.49■□□□□ 0.07
HOXA9-201ENST00000343483 CLRN3Q8NCR9 226 aa15.49■□□□□ 0.07
HOXA9-201ENST00000343483 GPR146Q96CH1 333 aa15.49■□□□□ 0.07
HOXA9-201ENST00000343483 SEBOXQ9HB31 216 aaPredicted RBP15.49■□□□□ 0.07
HOXA9-201ENST00000343483 C19orf12Q9NSK7 152 aa15.49■□□□□ 0.07
HOXA9-201ENST00000343483 STRAPQ9Y3F4 350 aaKnown RBP15.49■□□□□ 0.07
HOXA9-201ENST00000343483 ZNF462Q96JM2 2506 aa15.49■□□□□ 0.07
HOXA9-201ENST00000343483 CHST1O43916 411 aa15.48■□□□□ 0.07
HOXA9-201ENST00000343483 TMEM50AO95807 157 aa15.48■□□□□ 0.07
HOXA9-201ENST00000343483 IRF2P14316 349 aa15.48■□□□□ 0.07
HOXA9-201ENST00000343483 FHITP49789 147 aa15.48■□□□□ 0.07
HOXA9-201ENST00000343483 TMEM88Q6PEY1 159 aa15.48■□□□□ 0.07
HOXA9-201ENST00000343483 TMEM182Q6ZP80 229 aaPredicted RBP15.48■□□□□ 0.07
HOXA9-201ENST00000343483 A0A1B0GU03 582 aa15.48■□□□□ 0.07
HOXA9-201ENST00000343483 FAM90A27PA6NNH2 459 aa15.48■□□□□ 0.07
HOXA9-201ENST00000343483 RNF212BA8MTL3 300 aa15.48■□□□□ 0.07
HOXA9-201ENST00000343483 CCL21O00585 134 aa15.48■□□□□ 0.07
HOXA9-201ENST00000343483 IGKV1-39P01597 117 aa15.48■□□□□ 0.07
HOXA9-201ENST00000343483 IGKV1D-39P04432 117 aa15.48■□□□□ 0.07
HOXA9-201ENST00000343483 IZUMO4Q1ZYL8 232 aa15.48■□□□□ 0.07
HOXA9-201ENST00000343483 ST6GALNAC3Q8NDV1 305 aa15.48■□□□□ 0.07
HOXA9-201ENST00000343483 FAM222BQ8WU58 562 aa15.48■□□□□ 0.07
HOXA9-201ENST00000343483 ICE1Q9Y2F5 2266 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 C17orf100A8MU93 164 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 C9JQL5 133 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 CST7O76096 145 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 GZMHP20718 246 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 NPBWR1P48145 328 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 ZNF585BQ52M93 769 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 ZNF561Q8N587 486 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 COMMD1Q8N668 190 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 OR5C1Q8NGR4 320 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 Q8TCH9 128 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 C5orf30Q96GV9 206 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 TOLLIPQ9H0E2 274 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 DCAF16Q9NXF7 216 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 SLC25A6P12236 298 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 TNFRSF1AP19438 455 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 SNCAP37840 140 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 DYNLT3P51808 116 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 HTD2P86397 168 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 TLE1Q04724 770 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 BAXQ07812 192 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 OR2B11Q5JQS5 317 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 STUMQ69YW2 141 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 DUX4L9Q6RFH8 374 aaPredicted RBP15.47■□□□□ 0.07
HOXA9-201ENST00000343483 BTNL3Q6UXE8 466 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 ODF3L1Q8IXM7 274 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 ZBTB34Q8NCN2 500 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 PLPPR2Q96GM1 343 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 GNG12Q9UBI6 72 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 PSG11Q9UQ72 335 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 RNF115Q9Y4L5 304 aa15.47■□□□□ 0.07
HOXA9-201ENST00000343483 FAM157AC9JC47 383 aa15.46■□□□□ 0.07
HOXA9-201ENST00000343483 TOR1AO14656 332 aa15.46■□□□□ 0.07
HOXA9-201ENST00000343483 ST8SIA5O15466 376 aa15.46■□□□□ 0.07
HOXA9-201ENST00000343483 ADH4P08319 380 aa15.46■□□□□ 0.07
HOXA9-201ENST00000343483 TMEM217Q8N7C4 229 aa15.46■□□□□ 0.07
HOXA9-201ENST00000343483 DIRC2Q96SL1 478 aa15.46■□□□□ 0.07
HOXA9-201ENST00000343483 VSTM5A8MXK1 200 aa15.45■□□□□ 0.06
HOXA9-201ENST00000343483 GYPAP02724 150 aa15.45■□□□□ 0.06
HOXA9-201ENST00000343483 ATP6V0CP27449 155 aa15.45■□□□□ 0.06
HOXA9-201ENST00000343483 PAX9P55771 341 aa15.45■□□□□ 0.06
HOXA9-201ENST00000343483 CBLN2Q8IUK8 224 aa15.45■□□□□ 0.06
HOXA9-201ENST00000343483 OR2G3Q8NGZ4 309 aa15.45■□□□□ 0.06
HOXA9-201ENST00000343483 FAM213BQ8TBF2 198 aa15.45■□□□□ 0.06
HOXA9-201ENST00000343483 CACNG5Q9UF02 275 aa15.45■□□□□ 0.06
HOXA9-201ENST00000343483 SHISA9B4DS77 424 aa15.45■□□□□ 0.06
HOXA9-201ENST00000343483 IGKV1-5P01602 117 aa15.45■□□□□ 0.06
HOXA9-201ENST00000343483 NCMAPQ5T1S8 102 aa15.45■□□□□ 0.06
HOXA9-201ENST00000343483 DHRS7BQ6IAN0 325 aaPredicted RBP15.45■□□□□ 0.06
HOXA9-201ENST00000343483 NEUROG1Q92886 237 aa15.45■□□□□ 0.06
HOXA9-201ENST00000343483 LSM10Q969L4 123 aaKnown RBP15.45■□□□□ 0.06
HOXA9-201ENST00000343483 SDSLQ96GA7 329 aa15.45■□□□□ 0.06
HOXA9-201ENST00000343483 CCL13Q99616 98 aa15.45■□□□□ 0.06
HOXA9-201ENST00000343483 SAP30LQ9HAJ7 183 aa15.45■□□□□ 0.06
HOXA9-201ENST00000343483 COL12A1Q99715 3063 aa15.44■□□□□ 0.06
HOXA9-201ENST00000343483 CACNA1DQ01668 2161 aa15.44■□□□□ 0.06
HOXA9-201ENST00000343483 LRRC30A6NM36 301 aa15.44■□□□□ 0.06
HOXA9-201ENST00000343483 RAMP3O60896 148 aa15.44■□□□□ 0.06
HOXA9-201ENST00000343483 CD55P08174 381 aa15.44■□□□□ 0.06
HOXA9-201ENST00000343483 CHRNB4P30926 498 aa15.44■□□□□ 0.06
HOXA9-201ENST00000343483 RPL30P62888 115 aaKnown RBP15.44■□□□□ 0.06
HOXA9-201ENST00000343483 PEA15Q15121 130 aa15.44■□□□□ 0.06
HOXA9-201ENST00000343483 GUK1Q16774 197 aa15.44■□□□□ 0.06
HOXA9-201ENST00000343483 Q6ZRM9 215 aa15.44■□□□□ 0.06
HOXA9-201ENST00000343483 DMRTC2Q8IXT2 367 aaPredicted RBP15.44■□□□□ 0.06
HOXA9-201ENST00000343483 TCTEX1D2Q8WW35 142 aa15.44■□□□□ 0.06
HOXA9-201ENST00000343483 C14orf79Q96F83 325 aa15.44■□□□□ 0.06
HOXA9-201ENST00000343483 GAFA1Q96PS6 74 aa15.44■□□□□ 0.06
HOXA9-201ENST00000343483 OR6C3Q9NZP0 311 aa15.44■□□□□ 0.06
HOXA9-201ENST00000343483 RFNGQ9Y644 331 aa15.44■□□□□ 0.06
HOXA9-201ENST00000343483 PPT1P50897 306 aa15.44■□□□□ 0.06
HOXA9-201ENST00000343483 RPL23AP62750 156 aaKnown RBP15.44■□□□□ 0.06
HOXA9-201ENST00000343483 CATR1Q13166 79 aa15.44■□□□□ 0.06
HOXA9-201ENST00000343483 CR1LQ2VPA4 569 aa15.44■□□□□ 0.06
HOXA9-201ENST00000343483 Q3ZCU0 254 aa15.44■□□□□ 0.06
HOXA9-201ENST00000343483 FAM216BQ8N7L0 139 aa15.44■□□□□ 0.06
HOXA9-201ENST00000343483 LINC01560Q8TB33 94 aa15.44■□□□□ 0.06
HOXA9-201ENST00000343483 JPT1Q9UK76 154 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms