RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 RPL36A-HNRNPH2H7BZ11 118 aa10.21□□□□□ -0.77
SHANK2-201ENST00000338508 GDF9O60383 454 aa10.21□□□□□ -0.77
SHANK2-201ENST00000338508 FAM3BP58499 235 aaPredicted RBP10.21□□□□□ -0.77
SHANK2-201ENST00000338508 TMEM95Q3KNT9 176 aa10.21□□□□□ -0.77
SHANK2-201ENST00000338508 LINC01560Q8TB33 94 aa10.21□□□□□ -0.77
SHANK2-201ENST00000338508 EDIL3O43854 480 aa10.21□□□□□ -0.77
SHANK2-201ENST00000338508 AMY1AP04745 511 aa10.21□□□□□ -0.77
SHANK2-201ENST00000338508 TDGF1P13385 188 aa10.21□□□□□ -0.77
SHANK2-201ENST00000338508 BEND2Q8NDZ0 799 aa10.21□□□□□ -0.77
SHANK2-201ENST00000338508 DNASE2BQ8WZ79 361 aa10.21□□□□□ -0.77
SHANK2-201ENST00000338508 KCNK17Q96T54 332 aa10.21□□□□□ -0.77
SHANK2-201ENST00000338508 FOXI3A8MTJ6 420 aaPredicted RBP10.21□□□□□ -0.78
SHANK2-201ENST00000338508 UPK3AO75631 287 aa10.21□□□□□ -0.78
SHANK2-201ENST00000338508 RELQ04864 619 aaPredicted RBP10.21□□□□□ -0.78
SHANK2-201ENST00000338508 TMEM170BQ5T4T1 132 aa10.21□□□□□ -0.78
SHANK2-201ENST00000338508 SCNM1Q9BWG6 230 aa10.21□□□□□ -0.78
SHANK2-201ENST00000338508 ITGB4P16144 1822 aa10.21□□□□□ -0.78
SHANK2-201ENST00000338508 SAA1P0DJI8 122 aaPredicted RBP10.21□□□□□ -0.78
SHANK2-201ENST00000338508 SNRPD3P62318 126 aaKnown RBP10.21□□□□□ -0.78
SHANK2-201ENST00000338508 CHRNA10Q9GZZ6 450 aa10.21□□□□□ -0.78
SHANK2-201ENST00000338508 MYOFQ9NZM1 2061 aa10.21□□□□□ -0.78
SHANK2-201ENST00000338508 LOC105371242A0A075B767 164 aa10.21□□□□□ -0.78
SHANK2-201ENST00000338508 A0A1B0GV72 72 aa10.21□□□□□ -0.78
SHANK2-201ENST00000338508 GFRA3O60609 400 aa10.21□□□□□ -0.78
SHANK2-201ENST00000338508 EFNB2P52799 333 aa10.21□□□□□ -0.78
SHANK2-201ENST00000338508 STARD6P59095 220 aa10.21□□□□□ -0.78
SHANK2-201ENST00000338508 TGIF1Q15583 401 aa10.21□□□□□ -0.78
SHANK2-201ENST00000338508 TMEM177Q53S58 311 aa10.21□□□□□ -0.78
SHANK2-201ENST00000338508 NEU3Q9UQ49 428 aa10.21□□□□□ -0.78
SHANK2-201ENST00000338508 SIGLEC5O15389 551 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 FTH1P19P0C7X4 201 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 CXCL3P19876 107 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 LSM6P62312 80 aaKnown RBP10.2□□□□□ -0.78
SHANK2-201ENST00000338508 SIGLEC14Q08ET2 396 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 ATP1A1-AS1Q5TC04 95 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 FAM159AQ6UWV7 190 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 STPG3Q8N7X2 389 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 C11orf68Q9H3H3 251 aaKnown RBP10.2□□□□□ -0.78
SHANK2-201ENST00000338508 DOPEY2Q9Y3R5 2298 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 AKAP11Q9UKA4 1901 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 PPIAL4CA0A0B4J2A2 164 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 CISD3P0C7P0 127 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 PPIAL4GP0DN37 164 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 LCN2P80188 198 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 REC114Q7Z4M0 266 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 MRGPRGQ86SM5 289 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 NFAM1Q8NET5 270 aaPredicted RBP10.2□□□□□ -0.78
SHANK2-201ENST00000338508 NPVFQ9HCQ7 196 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 MRPS16Q9Y3D3 137 aaKnown RBP10.2□□□□□ -0.78
SHANK2-201ENST00000338508 DOCK2Q92608 1830 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 C11orf44Q8N8P7 122 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 IGHV3OR16-8A0A075B7F1 116 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 MFAP4P55083 255 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 DCAF12L2Q5VW00 463 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 A8MWL6 223 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 SCTP09683 121 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 VN1R4Q7Z5H5 301 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 C18orf15Q96N68 181 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 WFIKKN1Q96NZ8 548 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 DUX3Q96PT4 197 aa10.2□□□□□ -0.78
SHANK2-201ENST00000338508 SF3B5Q9BWJ5 86 aaKnown RBP10.2□□□□□ -0.78
SHANK2-201ENST00000338508 TDRD15B5MCY1 1934 aaKnown RBP10.2□□□□□ -0.78
SHANK2-201ENST00000338508 PRR19A6NJB7 356 aa10.19□□□□□ -0.78
SHANK2-201ENST00000338508 LEUTXA8MZ59 168 aa10.19□□□□□ -0.78
SHANK2-201ENST00000338508 MALP21145 153 aa10.19□□□□□ -0.78
SHANK2-201ENST00000338508 PRB3Q04118 309 aaPredicted RBP10.19□□□□□ -0.78
SHANK2-201ENST00000338508 KIAA1644Q3SXP7 199 aa10.19□□□□□ -0.78
SHANK2-201ENST00000338508 SHISA5Q8N114 240 aa10.19□□□□□ -0.78
SHANK2-201ENST00000338508 TRAV12-3A0A0B4J271 114 aa10.19□□□□□ -0.78
SHANK2-201ENST00000338508 C7orf77A4D0Y5 90 aa10.19□□□□□ -0.78
SHANK2-201ENST00000338508 OR4D5Q8NGN0 318 aa10.19□□□□□ -0.78
SHANK2-201ENST00000338508 CITED2Q99967 270 aaPredicted RBP10.19□□□□□ -0.78
SHANK2-201ENST00000338508 KCNE1BA0A087WTH5 132 aa10.19□□□□□ -0.78
SHANK2-201ENST00000338508 ABLIM2Q6H8Q1 611 aa10.19□□□□□ -0.78
SHANK2-201ENST00000338508 SLIRPQ9GZT3 109 aaKnown RBP10.19□□□□□ -0.78
SHANK2-201ENST00000338508 MYO16Q9Y6X6 1858 aa10.19□□□□□ -0.78
SHANK2-201ENST00000338508 CEACAM4O75871 244 aa10.19□□□□□ -0.78
SHANK2-201ENST00000338508 ATP6V0CP27449 155 aa10.19□□□□□ -0.78
SHANK2-201ENST00000338508 RBKSQ9H477 322 aa10.19□□□□□ -0.78
SHANK2-201ENST00000338508 SELENOKQ9Y6D0 94 aa10.19□□□□□ -0.78
SHANK2-201ENST00000338508 ELOA3CA0A087WX78 387 aaPredicted RBP10.19□□□□□ -0.78
SHANK2-201ENST00000338508 CTXND1A0A1B0GTU2 59 aa10.19□□□□□ -0.78
SHANK2-201ENST00000338508 RND2P52198 227 aa10.19□□□□□ -0.78
SHANK2-201ENST00000338508 CALYQ9NYX4 217 aa10.19□□□□□ -0.78
SHANK2-201ENST00000338508 M0R381 172 aa10.18□□□□□ -0.78
SHANK2-201ENST00000338508 MIC13Q5XKP0 118 aa10.18□□□□□ -0.78
SHANK2-201ENST00000338508 ZAR1Q86SH2 424 aa10.18□□□□□ -0.78
SHANK2-201ENST00000338508 LINC01465Q8N7H1 131 aa10.18□□□□□ -0.78
SHANK2-201ENST00000338508 GALNT14Q96FL9 552 aa10.18□□□□□ -0.78
SHANK2-201ENST00000338508 COLQQ9Y215 455 aaPredicted RBP10.18□□□□□ -0.78
SHANK2-201ENST00000338508 HPRT1P00492 218 aa10.18□□□□□ -0.78
SHANK2-201ENST00000338508 RPL8P62917 257 aaKnown RBP10.18□□□□□ -0.78
SHANK2-201ENST00000338508 ZNF506Q5JVG8 444 aa10.18□□□□□ -0.78
SHANK2-201ENST00000338508 LAMB1P07942 1786 aa10.18□□□□□ -0.78
SHANK2-201ENST00000338508 FAM74A3Q4VXF1 159 aa10.18□□□□□ -0.78
SHANK2-201ENST00000338508 PET117Q6UWS5 81 aa10.18□□□□□ -0.78
SHANK2-201ENST00000338508 CASP8AP2Q9UKL3 1982 aa10.18□□□□□ -0.78
SHANK2-201ENST00000338508 ATG4DQ86TL0 474 aaPredicted RBP10.18□□□□□ -0.78
SHANK2-201ENST00000338508 CYB561D1Q8N8Q1 229 aa10.18□□□□□ -0.78
SHANK2-201ENST00000338508 S1PR2O95136 353 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms