RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 CAMLGP49069 296 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 RBP2P50120 134 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 FUT6P51993 359 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 MTCP1P56278 107 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 DSCR4P56555 118 aaPredicted RBP4.11□□□□□ -1.75
CKS1B-201ENST00000308987 CLDN17P56750 224 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 CLDN18P56856 261 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 PIGPP57054 158 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 CD81P60033 236 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 PCBD1P61457 104 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 SNRPEP62304 92 aaKnown RBP4.11□□□□□ -1.75
CKS1B-201ENST00000308987 SRYQ05066 204 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 BAXQ07812 192 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 CLINT1Q14677 625 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 GNMTQ14749 295 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 OR8G1Q15617 311 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 KRTAP27-1Q3LI81 207 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 TMEM176BQ3YBM2 270 aaPredicted RBP4.11□□□□□ -1.75
CKS1B-201ENST00000308987 MIDNQ504T8 468 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 AWAT1Q58HT5 328 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 CT83Q5H943 113 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 FBXW12Q6X9E4 464 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 FAM219AQ8IW50 185 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 C20orf196Q8IYI0 205 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 SAXO1Q8IYX7 474 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 GPR137CQ8N3F9 429 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF610Q8N9Z0 462 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 BHLHE23Q8NDY6 225 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 OR4D5Q8NGN0 318 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 OR10G4Q8NGN3 311 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 OR8U1Q8NH10 309 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 SECTM1Q8WVN6 248 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 RTN4IP1Q8WWV3 396 aaPredicted RBP4.11□□□□□ -1.75
CKS1B-201ENST00000308987 GTF3AQ92664 365 aaKnown RBP4.11□□□□□ -1.75
CKS1B-201ENST00000308987 IL22RA2Q969J5 263 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 SGK3Q96BR1 496 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 MSI2Q96DH6 328 aaKnown RBP4.11□□□□□ -1.75
CKS1B-201ENST00000308987 GNPNAT1Q96EK6 184 aaPredicted RBP4.11□□□□□ -1.75
CKS1B-201ENST00000308987 AKR1E2Q96JD6 320 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 TMEM56Q96MV1 263 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 CLCC1Q96S66 551 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 SFXN3Q9BWM7 321 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 SLC25A31Q9H0C2 315 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 OPN3Q9H1Y3 402 aaPredicted RBP4.11□□□□□ -1.75
CKS1B-201ENST00000308987 OR51M1Q9H341 326 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 C11orf1Q9H5F2 150 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 SPACA1Q9HBV2 294 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 RPS10P5Q9NQ39 176 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 SIRT7Q9NRC8 400 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF701Q9NV72 531 aaPredicted RBP4.11□□□□□ -1.75
CKS1B-201ENST00000308987 LSM5Q9Y4Y9 91 aaKnown RBP4.11□□□□□ -1.75
CKS1B-201ENST00000308987 TMEM56-RWDD3S4R434 201 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 WNK2Q9Y3S1 2297 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 IGKV1D-8A0A087WSZ0 117 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 TRAV1-1A0A0B4J248 108 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 LRP5LA4QPB2 252 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 OR6C6A6NF89 314 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF850A8MQ14 1090 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 B4DEV8 164 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF732B4DXR9 585 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF814B7Z6K7 855 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 TRDCB7Z8K6 153 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 C9JQL5 133 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 XRCC2O43543 280 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 SGCEO43556 437 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 GATCO43716 136 aaKnown RBP4.1□□□□□ -1.75
CKS1B-201ENST00000308987 SYNGR3O43761 229 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 HSPB1P04792 205 aaKnown RBP4.1□□□□□ -1.75
CKS1B-201ENST00000308987 CTXN2P0C2S0 81 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 OR5AC1P0C628 307 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 SLC25A6P12236 298 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF14P17017 642 aaPredicted RBP4.1□□□□□ -1.75
CKS1B-201ENST00000308987 FUT3P21217 361 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 ACKR3P25106 362 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 PPT1P50897 306 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 RAB2AP61019 212 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 HERV-K104P61576 105 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 MALLQ13021 153 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 PMS2P11Q13670 270 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 GUSBP1Q15486 140 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 HIKESHIQ53FT3 197 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 C19orf54Q5BKX5 351 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 SOHLH1Q5JUK2 328 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 CARD17Q5XLA6 110 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 C6orf201Q7Z4U5 140 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 RTN4RL2Q86UN3 420 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 THNSL2Q86YJ6 484 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 FBXL14Q8N1E6 418 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 OSR2Q8N2R0 312 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 OR13D1Q8NGV5 346 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 OR14L1PQ8NHC6 308 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 HPSE2Q8WWQ2 592 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 PIGTQ969N2 578 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 ERGIC1Q969X5 290 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 SPSB4Q96A44 273 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 RBMXL1Q96E39 390 aaKnown RBP4.1□□□□□ -1.75
CKS1B-201ENST00000308987 BORCS8Q96FH0 119 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 BOD1Q96IK1 185 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 YPEL4Q96NS1 127 aa4.1□□□□□ -1.75
CKS1B-201ENST00000308987 CCL19Q99731 98 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms