RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 PIGTQ969N2 578 aa13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 ST6GALNAC6Q969X2 333 aa13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 CLDN23Q96B33 292 aa13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 TRAV36DV7A0A075B6V5 113 aa13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 A0A0G2JRQ6 117 aa13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 C2orf72A6NCS6 295 aa13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 NPIPB7O75200 414 aa13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 LGALS7P47929 136 aa13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 PSMB3P49720 205 aa13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 NMSQ5H8A3 153 aa13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 SPIN3Q5JUX0 258 aa13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 TBC1D26Q86UD7 250 aa13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 SIT1Q9Y3P8 196 aa13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 LHFPL6Q9Y693 200 aa13.37□□□□□ -0.27
CTDSP1-201ENST00000273062 ADAMTS20P59510 1910 aa13.36□□□□□ -0.27
CTDSP1-201ENST00000273062 DPRXA6NFQ7 191 aa13.36□□□□□ -0.27
CTDSP1-201ENST00000273062 PAGE4O60829 102 aa13.36□□□□□ -0.27
CTDSP1-201ENST00000273062 ZNF253O75346 499 aa13.36□□□□□ -0.27
CTDSP1-201ENST00000273062 FAM69BQ5VUD6 431 aa13.36□□□□□ -0.27
CTDSP1-201ENST00000273062 HLA-DQA1Q5Y7H0 255 aa13.36□□□□□ -0.27
CTDSP1-201ENST00000273062 MUC15Q8N387 334 aa13.36□□□□□ -0.27
CTDSP1-201ENST00000273062 FAM19A2Q8N3H0 131 aa13.36□□□□□ -0.27
CTDSP1-201ENST00000273062 PLPP3O14495 311 aa13.36□□□□□ -0.27
CTDSP1-201ENST00000273062 ANGPTL7O43827 346 aa13.36□□□□□ -0.27
CTDSP1-201ENST00000273062 FCGR2AP12318 317 aa13.36□□□□□ -0.27
CTDSP1-201ENST00000273062 THBS3P49746 956 aa13.36□□□□□ -0.27
CTDSP1-201ENST00000273062 FOXL1Q12952 345 aa13.36□□□□□ -0.27
CTDSP1-201ENST00000273062 PDCD1Q15116 288 aa13.36□□□□□ -0.27
CTDSP1-201ENST00000273062 KRTCAP3Q53RY4 240 aa13.36□□□□□ -0.27
CTDSP1-201ENST00000273062 VWA1Q6PCB0 445 aa13.36□□□□□ -0.27
CTDSP1-201ENST00000273062 EMC6Q9BV81 110 aa13.36□□□□□ -0.27
CTDSP1-201ENST00000273062 MRPL27Q9P0M9 148 aaKnown RBP13.36□□□□□ -0.27
CTDSP1-201ENST00000273062 CPAMD8Q8IZJ3 1885 aa13.35□□□□□ -0.27
CTDSP1-201ENST00000273062 KIAA1324LA8MWY0 1029 aaPredicted RBP13.35□□□□□ -0.27
CTDSP1-201ENST00000273062 GNG7O60262 68 aa13.35□□□□□ -0.27
CTDSP1-201ENST00000273062 CD99P14209 185 aa13.35□□□□□ -0.27
CTDSP1-201ENST00000273062 GNRHRP30968 328 aa13.35□□□□□ -0.27
CTDSP1-201ENST00000273062 ZNF525Q8N782 197 aa13.35□□□□□ -0.27
CTDSP1-201ENST00000273062 TMEM265A0A087WTH1 108 aa13.35□□□□□ -0.27
CTDSP1-201ENST00000273062 AHRRA9YTQ3 701 aa13.35□□□□□ -0.27
CTDSP1-201ENST00000273062 RAB29O14966 203 aa13.35□□□□□ -0.27
CTDSP1-201ENST00000273062 DXOO77932 396 aaKnown RBP13.35□□□□□ -0.27
CTDSP1-201ENST00000273062 IAPPP10997 89 aa13.35□□□□□ -0.27
CTDSP1-201ENST00000273062 PI4KAP42356 2102 aa13.35□□□□□ -0.27
CTDSP1-201ENST00000273062 LRRC10Q5BKY1 277 aa13.35□□□□□ -0.27
CTDSP1-201ENST00000273062 RAET1LQ5VY80 246 aa13.35□□□□□ -0.27
CTDSP1-201ENST00000273062 TCTEX1D1Q8N7M0 179 aa13.35□□□□□ -0.27
CTDSP1-201ENST00000273062 COPS7AQ9UBW8 275 aa13.35□□□□□ -0.27
CTDSP1-201ENST00000273062 LY6G6EA0A0G2JKS1 128 aa13.34□□□□□ -0.27
CTDSP1-201ENST00000273062 A0A1W2PQM1 296 aa13.34□□□□□ -0.27
CTDSP1-201ENST00000273062 FAM166BA8MTA8 275 aa13.34□□□□□ -0.27
CTDSP1-201ENST00000273062 M0R296 226 aa13.34□□□□□ -0.27
CTDSP1-201ENST00000273062 NAPSAO96009 420 aa13.34□□□□□ -0.27
CTDSP1-201ENST00000273062 CELA3BP08861 270 aa13.34□□□□□ -0.27
CTDSP1-201ENST00000273062 GABRA2P47869 451 aa13.34□□□□□ -0.27
CTDSP1-201ENST00000273062 ZNF83P51522 516 aa13.34□□□□□ -0.27
CTDSP1-201ENST00000273062 PLPPR5Q32ZL2 321 aa13.34□□□□□ -0.27
CTDSP1-201ENST00000273062 KIAA1644Q3SXP7 199 aa13.34□□□□□ -0.27
CTDSP1-201ENST00000273062 WDR74Q6RFH5 385 aaPredicted RBP13.34□□□□□ -0.27
CTDSP1-201ENST00000273062 POLR1DQ9Y2S0 133 aa13.34□□□□□ -0.27
CTDSP1-201ENST00000273062 U3KQA8 63 aa13.34□□□□□ -0.27
CTDSP1-201ENST00000273062 A0A1W2PS18 150 aa13.34□□□□□ -0.27
CTDSP1-201ENST00000273062 APOBEC3AP31941 199 aaPredicted RBP13.34□□□□□ -0.27
CTDSP1-201ENST00000273062 RPS20P60866 119 aaKnown RBP13.34□□□□□ -0.27
CTDSP1-201ENST00000273062 ACSM6Q6P461 480 aa13.34□□□□□ -0.27
CTDSP1-201ENST00000273062 KLHDC1Q8N7A1 406 aa13.34□□□□□ -0.27
CTDSP1-201ENST00000273062 Q96M66 194 aa13.34□□□□□ -0.27
CTDSP1-201ENST00000273062 RARRES3Q9UL19 164 aa13.34□□□□□ -0.27
CTDSP1-201ENST00000273062 TRBV20OR9-2A0A075B6H5 130 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 VENTXO95231 258 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 CDAP32320 146 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 PSG9Q00887 426 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 SFRP2Q96HF1 295 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 SPIN2AQ99865 258 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 SPIN2BQ9BPZ2 258 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 TRAV8-6A0A0B4J262 113 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 FCN1O00602 326 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 IGLL1P15814 213 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 IER3P46695 156 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 HERV-K104P61576 105 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 GNB1P62873 340 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 SRPXP78539 464 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 CCL7P80098 99 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 LYSMD4Q5XG99 296 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 ZNF441Q8N8Z8 693 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 CCDC71LQ8N9Z2 235 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 OR1K1Q8NGR3 316 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 OR1N2Q8NGR9 330 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 NEIL1Q96FI4 390 aaPredicted RBP13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 CLEC5AQ9NY25 188 aa13.33□□□□□ -0.28
CTDSP1-201ENST00000273062 UBE2L5PA0A1B0GUS4 154 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 ALG1L2C9J202 215 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 SLC17A3O00476 420 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 RER1O15258 196 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 NRASP01111 189 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 KRASP01116 189 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 PPYP01298 95 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 FBXW4P57775 412 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 PMP22Q01453 160 aa13.32□□□□□ -0.28
CTDSP1-201ENST00000273062 ASB10Q8WXI3 467 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms