RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 ATRXP46100 2492 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 BORCS7-ASMTA0A0B4J1R7 106 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 WRBO00258 174 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 SIAH2O43255 324 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 PLAUP00749 431 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 ZP3P21754 424 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 SULT1A2P50226 295 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 LINC00205P59089 165 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 LY6DQ14210 128 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 UTF1Q5T230 341 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 CORO2AQ92828 525 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 SMIM8Q96KF7 97 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 LINC00052Q96N35 136 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 IFI27L2Q9H2X8 130 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 RAB9BQ9NP90 201 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 DSCAML1Q8TD84 2053 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 CHD8Q9HCK8 2581 aa13.75□□□□□ -0.21
CCDC40-201ENST00000269318 TRGV10A0A0A0MS01 117 aa13.75□□□□□ -0.21
CCDC40-201ENST00000269318 TRAV38-1A0A0B4J264 116 aa13.75□□□□□ -0.21
CCDC40-201ENST00000269318 ITGB1BP1O14713 200 aa13.75□□□□□ -0.21
CCDC40-201ENST00000269318 FBXO24O75426 580 aa13.75□□□□□ -0.21
CCDC40-201ENST00000269318 S1PR2O95136 353 aa13.75□□□□□ -0.21
CCDC40-201ENST00000269318 CLDN14O95500 239 aa13.75□□□□□ -0.21
CCDC40-201ENST00000269318 SFTPCP11686 197 aa13.75□□□□□ -0.21
CCDC40-201ENST00000269318 GPR12P47775 334 aa13.75□□□□□ -0.21
CCDC40-201ENST00000269318 ZNF816Q0VGE8 651 aaPredicted RBP13.75□□□□□ -0.21
CCDC40-201ENST00000269318 C1orf87Q8N0U7 546 aa13.75□□□□□ -0.21
CCDC40-201ENST00000269318 SAT2Q96F10 170 aaPredicted RBP13.75□□□□□ -0.21
CCDC40-201ENST00000269318 RAB40CQ96S21 281 aa13.75□□□□□ -0.21
CCDC40-201ENST00000269318 MS4A5Q9H3V2 200 aa13.75□□□□□ -0.21
CCDC40-201ENST00000269318 TMEM106BQ9NUM4 274 aa13.75□□□□□ -0.21
CCDC40-201ENST00000269318 GFOD1Q9NXC2 390 aa13.75□□□□□ -0.21
CCDC40-201ENST00000269318 ZNF705EA8MWA4 302 aaPredicted RBP13.74□□□□□ -0.21
CCDC40-201ENST00000269318 B9A039 149 aa13.74□□□□□ -0.21
CCDC40-201ENST00000269318 TNFRSF13BO14836 293 aaPredicted RBP13.74□□□□□ -0.21
CCDC40-201ENST00000269318 DUTP33316 252 aaKnown RBP13.74□□□□□ -0.21
CCDC40-201ENST00000269318 BAXQ07812 192 aa13.74□□□□□ -0.21
CCDC40-201ENST00000269318 CCDC28AQ8IWP9 274 aa13.74□□□□□ -0.21
CCDC40-201ENST00000269318 DYNLRB1Q9NP97 96 aa13.74□□□□□ -0.21
CCDC40-201ENST00000269318 TAS2R3Q9NYW6 316 aa13.74□□□□□ -0.21
CCDC40-201ENST00000269318 PPIAL4EA0A075B759 164 aa13.74□□□□□ -0.21
CCDC40-201ENST00000269318 NKX6-3A6NJ46 265 aa13.74□□□□□ -0.21
CCDC40-201ENST00000269318 B8ZZF3 427 aa13.74□□□□□ -0.21
CCDC40-201ENST00000269318 PPIAL4DF5H284 164 aa13.74□□□□□ -0.21
CCDC40-201ENST00000269318 TMPRSS2O15393 492 aa13.74□□□□□ -0.21
CCDC40-201ENST00000269318 SYNGR2O43760 224 aa13.74□□□□□ -0.21
CCDC40-201ENST00000269318 SEC11BP0C7V7 166 aa13.74□□□□□ -0.21
CCDC40-201ENST00000269318 PPIAL4FP0DN26 164 aa13.74□□□□□ -0.21
CCDC40-201ENST00000269318 SPP1P10451 314 aa13.74□□□□□ -0.21
CCDC40-201ENST00000269318 G6PCP35575 357 aa13.74□□□□□ -0.21
CCDC40-201ENST00000269318 MARC2Q969Z3 335 aa13.74□□□□□ -0.21
CCDC40-201ENST00000269318 PPIAL4AQ9Y536 164 aa13.74□□□□□ -0.21
CCDC40-201ENST00000269318 WSB1Q9Y6I7 421 aa13.74□□□□□ -0.21
CCDC40-201ENST00000269318 RELNP78509 3460 aa13.74□□□□□ -0.21
CCDC40-201ENST00000269318 ZNF729A6NN14 1252 aaPredicted RBP13.73□□□□□ -0.21
CCDC40-201ENST00000269318 TOR1AO14656 332 aa13.73□□□□□ -0.21
CCDC40-201ENST00000269318 SLC31A2O15432 143 aa13.73□□□□□ -0.21
CCDC40-201ENST00000269318 TXNL1O43396 289 aa13.73□□□□□ -0.21
CCDC40-201ENST00000269318 FCN3O75636 299 aa13.73□□□□□ -0.21
CCDC40-201ENST00000269318 KRASP01116 189 aa13.73□□□□□ -0.21
CCDC40-201ENST00000269318 MIDNQ504T8 468 aa13.73□□□□□ -0.21
CCDC40-201ENST00000269318 NCR3LG1Q68D85 454 aa13.73□□□□□ -0.21
CCDC40-201ENST00000269318 CCL17Q92583 94 aa13.73□□□□□ -0.21
CCDC40-201ENST00000269318 CISD1Q9NZ45 108 aaKnown RBP13.73□□□□□ -0.21
CCDC40-201ENST00000269318 GAB2Q9UQC2 676 aa13.73□□□□□ -0.21
CCDC40-201ENST00000269318 ROS1P08922 2347 aa13.73□□□□□ -0.21
CCDC40-201ENST00000269318 TANC2Q9HCD6 1990 aa13.73□□□□□ -0.21
CCDC40-201ENST00000269318 KRBOX1C9JBD0 128 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 FAM90A26D6RGX4 464 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 CST7O76096 145 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 ATG12O94817 140 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 IGHV3-7P01780 117 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 LOXP28300 417 aaPredicted RBP13.72□□□□□ -0.21
CCDC40-201ENST00000269318 CLINT1Q14677 625 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 CA5BP1Q8WTZ4 195 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 ABHD14AQ9BUJ0 271 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 KCNJ16Q9NPI9 418 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 USF3Q68DE3 2245 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 RAB19A4D1S5 217 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 MED6O75586 246 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 DYNLT3P51808 116 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 RPL23AP62750 156 aaKnown RBP13.72□□□□□ -0.21
CCDC40-201ENST00000269318 ZNF266Q14584 549 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 RPL39P5Q59GN2 51 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 CT45A1Q5HYN5 189 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 PXDC1Q5TGL8 231 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 C1orf229Q6ZS94 237 aaPredicted RBP13.72□□□□□ -0.21
CCDC40-201ENST00000269318 ZNF439Q8NDP4 499 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 OR5C1Q8NGR4 320 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 CT45A3Q8NHU0 189 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 CD300LFQ8TDQ1 290 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 LEAP2Q969E1 77 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 IDI2-AS1Q9NZ38 188 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 SLC25A10Q9UBX3 287 aaPredicted RBP13.72□□□□□ -0.21
CCDC40-201ENST00000269318 LAMP3Q9UQV4 416 aa13.72□□□□□ -0.21
CCDC40-201ENST00000269318 ITPR1Q14643 2758 aa13.71□□□□□ -0.21
CCDC40-201ENST00000269318 NDUFB7P17568 137 aa13.71□□□□□ -0.21
CCDC40-201ENST00000269318 RAB7AP51149 207 aa13.71□□□□□ -0.21
CCDC40-201ENST00000269318 TFF3Q07654 80 aa13.71□□□□□ -0.21
CCDC40-201ENST00000269318 TUSC1Q2TAM9 212 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms