RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 H3BQ15 152 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 FAM74A4Q5TZK3 123 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 MARVELD1Q9BSK0 173 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 NDUFA2O43678 99 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 C1QAP02745 245 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 MMD2Q8IY49 270 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 SLC25A45Q8N413 288 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 A0A0U1RQV5 110 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 A0A1W2PRX2 142 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 CDS2O95674 445 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 PNKDQ8N490 385 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 VN1R17PQ8TDU5 208 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 SAP25Q8TEE9 199 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 ST6GAL2Q96JF0 529 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 SFXN3Q9BWM7 321 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 RELQ04864 619 aaPredicted RBP11.42□□□□□ -0.58
COL1A1-201ENST00000225964 SNAI3Q3KNW1 292 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 FOXJ2Q9P0K8 574 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 TSPAN2O60636 221 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 S1PR2O95136 353 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 CA2P00918 260 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 RCC1P18754 421 aaPredicted RBP11.42□□□□□ -0.58
COL1A1-201ENST00000225964 PCOLCEQ15113 449 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 DNLZQ5SXM8 178 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 KCNK17Q96T54 332 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 ZNF256Q9Y2P7 627 aaPredicted RBP11.42□□□□□ -0.58
COL1A1-201ENST00000225964 LOC101059948A0A1B0GTJ6 334 aa11.42□□□□□ -0.58
COL1A1-201ENST00000225964 SNRPD3P62318 126 aaKnown RBP11.42□□□□□ -0.58
COL1A1-201ENST00000225964 PGPA6NDG6 321 aa11.41□□□□□ -0.58
COL1A1-201ENST00000225964 SGK494Q96LW2 274 aa11.41□□□□□ -0.58
COL1A1-201ENST00000225964 ZNF107Q9UII5 783 aaPredicted RBP11.41□□□□□ -0.58
COL1A1-201ENST00000225964 FOXH1O75593 365 aa11.41□□□□□ -0.58
COL1A1-201ENST00000225964 RAB9AP51151 201 aa11.41□□□□□ -0.58
COL1A1-201ENST00000225964 LCN2P80188 198 aa11.41□□□□□ -0.58
COL1A1-201ENST00000225964 MEIG1Q5JSS6 88 aa11.41□□□□□ -0.58
COL1A1-201ENST00000225964 ANKRD31Q8N7Z5 1873 aa11.41□□□□□ -0.58
COL1A1-201ENST00000225964 OR2A4O95047 310 aa11.41□□□□□ -0.58
COL1A1-201ENST00000225964 COX6A1P12074 109 aa11.41□□□□□ -0.58
COL1A1-201ENST00000225964 LGALS3P17931 250 aaKnown RBP11.41□□□□□ -0.58
COL1A1-201ENST00000225964 ATP6V0CP27449 155 aa11.41□□□□□ -0.58
COL1A1-201ENST00000225964 OR2A7Q96R45 310 aa11.41□□□□□ -0.58
COL1A1-201ENST00000225964 SRXN1Q9BYN0 137 aa11.41□□□□□ -0.58
COL1A1-201ENST00000225964 CD99P14209 185 aa11.41□□□□□ -0.58
COL1A1-201ENST00000225964 GPR82Q96P67 336 aa11.41□□□□□ -0.58
COL1A1-201ENST00000225964 ZNF430Q9H8G1 570 aaPredicted RBP11.41□□□□□ -0.58
COL1A1-201ENST00000225964 EPOPA6NHQ4 379 aa11.41□□□□□ -0.58
COL1A1-201ENST00000225964 TSPOP30536 169 aa11.41□□□□□ -0.58
COL1A1-201ENST00000225964 TRAV30A0A087WSZ9 112 aa11.4□□□□□ -0.58
COL1A1-201ENST00000225964 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.4□□□□□ -0.58
COL1A1-201ENST00000225964 H0Y980 276 aa11.4□□□□□ -0.58
COL1A1-201ENST00000225964 LIPFP07098 398 aa11.4□□□□□ -0.58
COL1A1-201ENST00000225964 CLEC7AQ9BXN2 247 aa11.4□□□□□ -0.58
COL1A1-201ENST00000225964 PRRC2BQ5JSZ5 2229 aaKnown RBP11.4□□□□□ -0.58
COL1A1-201ENST00000225964 RND2P52198 227 aa11.4□□□□□ -0.58
COL1A1-201ENST00000225964 ELOVL1Q9BW60 279 aa11.4□□□□□ -0.58
COL1A1-201ENST00000225964 MFAP2P55001 183 aa11.4□□□□□ -0.58
COL1A1-201ENST00000225964 YAE1D1Q9NRH1 226 aa11.4□□□□□ -0.58
COL1A1-201ENST00000225964 OPN4Q9UHM6 478 aa11.4□□□□□ -0.58
COL1A1-201ENST00000225964 IGHV3-66A0A0C4DH42 116 aa11.4□□□□□ -0.58
COL1A1-201ENST00000225964 ASAH2BP0C7U1 165 aa11.4□□□□□ -0.58
COL1A1-201ENST00000225964 ACSF3Q4G176 576 aaPredicted RBP11.4□□□□□ -0.58
COL1A1-201ENST00000225964 PET117Q6UWS5 81 aa11.4□□□□□ -0.58
COL1A1-201ENST00000225964 RAB24Q969Q5 203 aa11.4□□□□□ -0.58
COL1A1-201ENST00000225964 ELOVL5Q9NYP7 299 aa11.4□□□□□ -0.58
COL1A1-201ENST00000225964 PAM16Q9Y3D7 125 aa11.4□□□□□ -0.58
COL1A1-201ENST00000225964 V9GYH0 126 aa11.4□□□□□ -0.58
COL1A1-201ENST00000225964 HOXA6P31267 233 aa11.4□□□□□ -0.59
COL1A1-201ENST00000225964 OR11H7Q8NGC8 314 aa11.4□□□□□ -0.59
COL1A1-201ENST00000225964 KLF14Q8TD94 323 aaPredicted RBP11.4□□□□□ -0.59
COL1A1-201ENST00000225964 COL18A1P39060 1754 aa11.4□□□□□ -0.59
COL1A1-201ENST00000225964 C21orf62-AS1Q17RA5 79 aa11.39□□□□□ -0.59
COL1A1-201ENST00000225964 C2orf83Q53S99 150 aa11.39□□□□□ -0.59
COL1A1-201ENST00000225964 IBA57Q5T440 356 aaKnown RBP11.39□□□□□ -0.59
COL1A1-201ENST00000225964 RFLNBQ8N5W9 214 aa11.39□□□□□ -0.59
COL1A1-201ENST00000225964 TP53RKQ96S44 253 aa11.39□□□□□ -0.59
COL1A1-201ENST00000225964 CXCL3P19876 107 aa11.39□□□□□ -0.59
COL1A1-201ENST00000225964 FXYD3Q14802 87 aa11.39□□□□□ -0.59
COL1A1-201ENST00000225964 SLC16A13Q7RTY0 426 aa11.39□□□□□ -0.59
COL1A1-201ENST00000225964 GALNT14Q96FL9 552 aa11.39□□□□□ -0.59
COL1A1-201ENST00000225964 A8MWL6 223 aa11.39□□□□□ -0.59
COL1A1-201ENST00000225964 GCSAMLQ5JQS6 135 aa11.39□□□□□ -0.59
COL1A1-201ENST00000225964 ZNF25P17030 456 aaPredicted RBP11.39□□□□□ -0.59
COL1A1-201ENST00000225964 MAP1LC3AQ9H492 121 aa11.39□□□□□ -0.59
COL1A1-201ENST00000225964 SYNGR3O43761 229 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 PRSS2P07478 247 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 COX6CP09669 75 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 NPPCP23582 126 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 MMP16P51512 607 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 ITLN2Q8WWU7 325 aaPredicted RBP11.38□□□□□ -0.59
COL1A1-201ENST00000225964 TRGV3P03979 118 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 ACAA1P09110 424 aaPredicted RBP11.38□□□□□ -0.59
COL1A1-201ENST00000225964 RUNX1Q01196 453 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 ODAMA1E959 279 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 FAM74A7A6NL05 159 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 DXOO77932 396 aaKnown RBP11.38□□□□□ -0.59
COL1A1-201ENST00000225964 KLK15Q9H2R5 256 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 RALYQ9UKM9 306 aaKnown RBP11.38□□□□□ -0.59
COL1A1-201ENST00000225964 LOC107984156A0A0G2JMH3 177 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 TMEM238LA0A1B0GVL6 79 aa11.38□□□□□ -0.59
COL1A1-201ENST00000225964 A6NJY4 79 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms