RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 FBXL17Q9UF56 701 aa2.86□□□□□ -1.95
LIG4-205ENST00000614526 ZDHHC8Q9ULC8 765 aa2.86□□□□□ -1.95
LIG4-205ENST00000614526 LINC00473A8K010 186 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 KIAA1324LA8MWY0 1029 aaPredicted RBP2.85□□□□□ -1.95
LIG4-205ENST00000614526 IFNL4K9M1U5 179 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 MGST3O14880 152 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 AGPAT2O15120 278 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 CHST1O43916 411 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 DEDDO75618 318 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 SCO1O75880 301 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 CLDN1O95832 211 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 LHBP01229 141 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 NMBP08949 121 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 TNFRSF1AP19438 455 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 COL8A2P25067 703 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 ZNF585BQ52M93 769 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 PRAMEF5Q5TYX0 476 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 MOB1BQ7L9L4 216 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 SPAG16Q8N0X2 631 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 MUC15Q8N387 334 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.85□□□□□ -1.95
LIG4-205ENST00000614526 KDF1Q8NAX2 398 aaPredicted RBP2.85□□□□□ -1.95
LIG4-205ENST00000614526 BVESQ8NE79 360 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 NUP37Q8NFH4 326 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 SCARB1Q8WTV0 552 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 PRORYQ9H606 182 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 TUBD1Q9UJT1 453 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 ZNF462Q96JM2 2506 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 VSTM5A8MXK1 200 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 C15orf65H3BRN8 121 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 M0R1X1 148 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 FCGR3BO75015 233 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 EIF3GO75821 320 aaKnown RBP eCLIP2.85□□□□□ -1.95
LIG4-205ENST00000614526 S1PR2O95136 353 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 TMEM50AO95807 157 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 IGKV1-5P01602 117 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 PET100P0DJ07 73 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 RRASP10301 218 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 VDAC1P21796 283 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 S100A1P23297 94 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 UCP1P25874 307 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 PLA2G5P39877 138 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 GPR12P47775 334 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 REG1BP48304 166 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 P2RX3P56373 397 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 VAMP2P63027 116 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 SRSF7Q16629 238 aaKnown RBP eCLIP2.85□□□□□ -1.95
LIG4-205ENST00000614526 NCR3LG1Q68D85 454 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 C1orf229Q6ZS94 237 aaPredicted RBP2.85□□□□□ -1.95
LIG4-205ENST00000614526 C1orf174Q8IYL3 243 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 LYG1Q8N1E2 194 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 PPP1R35Q8TAP8 253 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 GAFA1Q96PS6 74 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 EGLN1Q9GZT9 426 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 PLEKHF2Q9H8W4 249 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 RHOFQ9HBH0 211 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 WFDC1Q9HC57 220 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 CYTL1Q9NRR1 136 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 C19orf12Q9NSK7 152 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 TMEM106BQ9NUM4 274 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 SDHAF2Q9NX18 166 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 CALYQ9NYX4 217 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 LAMP3Q9UQV4 416 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 TMED3Q9Y3Q3 217 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 RNF115Q9Y4L5 304 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 USP24Q9UPU5 2620 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 USP9XQ93008 2570 aaPredicted RBP2.85□□□□□ -1.95
LIG4-205ENST00000614526 PPIAL4EA0A075B759 164 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 LRRC30A6NM36 301 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 PPIAL4DF5H284 164 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 H0Y980 276 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 TXNL1O43396 289 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 NDUFS7O75251 213 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 PROP1O75360 226 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 FCN3O75636 299 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 C1QL1O75973 258 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 ACAA1P09110 424 aaPredicted RBP2.85□□□□□ -1.95
LIG4-205ENST00000614526 PPIAL4FP0DN26 164 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 GZMHP20718 246 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 APOBEC3AP31941 199 aaPredicted RBP2.85□□□□□ -1.95
LIG4-205ENST00000614526 FHITP49789 147 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 BRWD1-AS2P59051 145 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 TMEM267Q0VDI3 215 aaPredicted RBP2.85□□□□□ -1.95
LIG4-205ENST00000614526 ZNF273Q14593 569 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 MST1LQ2TV78 715 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 MORN2Q502X0 79 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 CLLU1Q5K131 121 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 SHEQ5VZ18 495 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 STUMQ69YW2 141 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 BAP18Q8IXM2 172 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 PDZD9Q8IXQ8 264 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 FAM185AQ8N0U4 392 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 DMBX1Q8NFW5 382 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 OR10Z1Q8NGY1 313 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 NARS2Q96I59 477 aaKnown RBP2.85□□□□□ -1.95
LIG4-205ENST00000614526 TMEM56Q96MV1 263 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 ZNF665Q9H7R5 613 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 SLC25A10Q9UBX3 287 aaPredicted RBP2.85□□□□□ -1.95
LIG4-205ENST00000614526 PPIAL4AQ9Y536 164 aa2.85□□□□□ -1.95
LIG4-205ENST00000614526 TMEM56-RWDD3S4R434 201 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms