RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 SUCNR1Q9BXA5 334 aa1.75□□□□□ -2.13
SCAMP1-205ENST00000614488 MROQ9BYG7 248 aa1.75□□□□□ -2.13
SCAMP1-205ENST00000614488 SLC25A31Q9H0C2 315 aa1.75□□□□□ -2.13
SCAMP1-205ENST00000614488 TRABDQ9H4I3 376 aa1.75□□□□□ -2.13
SCAMP1-205ENST00000614488 SND1-IT1Q9HBX3 110 aa1.75□□□□□ -2.13
SCAMP1-205ENST00000614488 RBM12B-AS1Q9P1G2 102 aa1.75□□□□□ -2.13
SCAMP1-205ENST00000614488 FBXO5Q9UKT4 447 aa1.75□□□□□ -2.13
SCAMP1-205ENST00000614488 ARL5AQ9Y689 179 aa1.75□□□□□ -2.13
SCAMP1-205ENST00000614488 ENPP4Q9Y6X5 453 aa1.75□□□□□ -2.13
SCAMP1-205ENST00000614488 PCF11O94913 1555 aaKnown RBP1.75□□□□□ -2.13
SCAMP1-205ENST00000614488 KMT2EQ8IZD2 1858 aa1.75□□□□□ -2.13
SCAMP1-205ENST00000614488 SPATA31E1Q6ZUB1 1445 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 A0A0G2JMP0 313 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 A0A0X1KG70 313 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 GNG14A0A1W2PPG7 69 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 ARGFXA6NJG6 315 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 I3L4J1 428 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 SYNGR2O43760 224 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 CXCL2P19875 107 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 ALOX5APP20292 161 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 CFL1P23528 166 aaKnown RBP1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 SULT1A1P50225 295 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 SULT1A2P50226 295 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 RPL19P84098 196 aaKnown RBP1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 KRR1Q13601 381 aaKnown RBP1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 CLEC12BQ2HXU8 276 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 HIST2H3PS2Q5TEC6 136 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 TNFAIP8L2Q6P589 184 aaPredicted RBP1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 LYG2Q86SG7 212 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 PRNTQ86SH4 94 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 NAA40Q86UY6 237 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 NIT1Q86X76 327 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 ITPRIPQ8IWB1 547 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 LINC00337Q8N6G1 96 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 OR11L1Q8NGX0 322 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 EEF1AKMT1Q8WVE0 214 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 TMA16Q96EY4 203 aaKnown RBP1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 IMP4Q96G21 291 aaKnown RBP1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 LINC01587Q99440 93 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 TLNRD1Q9H1K6 362 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 TXNIPQ9H3M7 391 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 ASB7Q9H672 318 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 GLTPQ9NZD2 209 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 VPS29Q9UBQ0 182 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 CCDC144AA2RUR9 1427 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 SSH2Q76I76 1423 aa1.74□□□□□ -2.13
SCAMP1-205ENST00000614488 CACNA1GO43497 2377 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 DNMT1P26358 1616 aaKnown RBP1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 FAM183AA6NL82 134 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 DISC1C4P0D8 188 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 H3BQ85 93 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 KLRC4O43908 158 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 PDCD6O75340 191 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 ARL6IP5O75915 188 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 EPPINO95925 133 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 IFNA14P01570 189 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 ZNF708P17019 499 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 CD79BP40259 229 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 CDK9P50750 372 aaKnown RBP1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 CCL23P55773 120 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 TMEM33P57088 247 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 SPCS3P61009 180 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 NAA20P61599 178 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 GRB2P62993 217 aaKnown RBP1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 SLC35A2P78381 396 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 C1DQ13901 141 aaKnown RBP1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 Q499Y3 187 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 ACSBG2Q5FVE4 666 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 SPATA31B1PQ5VZV4 182 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 TRIQKQ629K1 86 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 TMEM215Q68D42 235 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 SFXN4Q6P4A7 337 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 DHRS4L2Q6PKH6 230 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 TMED4Q7Z7H5 227 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 MUC15Q8N387 334 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 TMEM161BQ8NDZ6 487 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 OR2M7Q8NG81 312 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 OR10D3Q8NH80 312 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 MFSD8Q8NHS3 518 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 RASSF5Q8WWW0 418 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 SIGMAR1Q99720 223 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 NIPSNAP1Q9BPW8 284 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 MED18Q9BUE0 208 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 CHST5Q9GZS9 411 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 BATF3Q9NR55 127 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 PRO0628Q9UI54 55 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 DKKL1Q9UK85 242 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 VPREB3Q9UKI3 123 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 PRELID3BQ9Y3B1 194 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 LSM5Q9Y4Y9 91 aaKnown RBP1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 CAMSAP1Q5T5Y3 1602 aa1.73□□□□□ -2.13
SCAMP1-205ENST00000614488 A0A1W2PP64 1363 aa1.72□□□□□ -2.13
SCAMP1-205ENST00000614488 ROCK1Q13464 1354 aa1.72□□□□□ -2.13
SCAMP1-205ENST00000614488 EIF3AQ14152 1382 aaKnown RBP1.72□□□□□ -2.13
SCAMP1-205ENST00000614488 NRCAMQ92823 1304 aa1.72□□□□□ -2.13
SCAMP1-205ENST00000614488 ZNF532Q9HCE3 1301 aa1.72□□□□□ -2.13
SCAMP1-205ENST00000614488 NAV1Q8NEY1 1877 aa1.72□□□□□ -2.13
SCAMP1-205ENST00000614488 A0A087WUJ7 227 aa1.72□□□□□ -2.13
SCAMP1-205ENST00000614488 TRAV8-3A0A0A6YYJ7 113 aa1.72□□□□□ -2.13
SCAMP1-205ENST00000614488 LOC389332A0A1B0GUA5 103 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms