RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 C5orf51A6NDU8 294 aa14.58□□□□□ -0.07
SHKBP1-224ENST00000600718 OVOL3O00110 214 aa14.58□□□□□ -0.07
SHKBP1-224ENST00000600718 PPIHO43447 177 aaKnown RBP14.58□□□□□ -0.07
SHKBP1-224ENST00000600718 WNT2P09544 360 aa14.58□□□□□ -0.07
SHKBP1-224ENST00000600718 AVPI1Q5T686 147 aa14.58□□□□□ -0.07
SHKBP1-224ENST00000600718 LGI3Q8N145 548 aa14.58□□□□□ -0.07
SHKBP1-224ENST00000600718 OR10A7Q8NGE5 316 aa14.58□□□□□ -0.07
SHKBP1-224ENST00000600718 OR52M1Q8NGK5 317 aa14.58□□□□□ -0.07
SHKBP1-224ENST00000600718 H1FXQ92522 213 aaKnown RBP14.58□□□□□ -0.07
SHKBP1-224ENST00000600718 WDR89Q96FK6 387 aaPredicted RBP14.58□□□□□ -0.07
SHKBP1-224ENST00000600718 TP53RKQ96S44 253 aa14.58□□□□□ -0.07
SHKBP1-224ENST00000600718 GAL3ST2Q9H3Q3 398 aa14.58□□□□□ -0.07
SHKBP1-224ENST00000600718 C13orf42A0A1B0GVH6 325 aa14.58□□□□□ -0.08
SHKBP1-224ENST00000600718 FAM25EA8MYX2 175 aa14.58□□□□□ -0.08
SHKBP1-224ENST00000600718 ITGB1BP1O14713 200 aa14.58□□□□□ -0.08
SHKBP1-224ENST00000600718 GPR37O15354 613 aa14.58□□□□□ -0.08
SHKBP1-224ENST00000600718 F2RP25116 425 aa14.58□□□□□ -0.08
SHKBP1-224ENST00000600718 CYCSP99999 105 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-224ENST00000600718 OPCMLQ14982 345 aa14.58□□□□□ -0.08
SHKBP1-224ENST00000600718 TMEM200BQ69YZ2 307 aa14.58□□□□□ -0.08
SHKBP1-224ENST00000600718 MSI2Q96DH6 328 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-224ENST00000600718 TMEM222Q9H0R3 208 aa14.58□□□□□ -0.08
SHKBP1-224ENST00000600718 GFOD1Q9NXC2 390 aa14.58□□□□□ -0.08
SHKBP1-224ENST00000600718 RNF150Q9ULK6 438 aa14.58□□□□□ -0.08
SHKBP1-224ENST00000600718 SESN1Q9Y6P5 492 aa14.58□□□□□ -0.08
SHKBP1-224ENST00000600718 ADAP1O75689 374 aa14.57□□□□□ -0.08
SHKBP1-224ENST00000600718 OMGP23515 440 aa14.57□□□□□ -0.08
SHKBP1-224ENST00000600718 DRAM1Q8N682 238 aa14.57□□□□□ -0.08
SHKBP1-224ENST00000600718 SEC22AQ96IW7 307 aa14.57□□□□□ -0.08
SHKBP1-224ENST00000600718 REG4Q9BYZ8 158 aa14.57□□□□□ -0.08
SHKBP1-224ENST00000600718 OR2D2Q9H210 308 aa14.57□□□□□ -0.08
SHKBP1-224ENST00000600718 KIAA2026Q5HYC2 2103 aa14.57□□□□□ -0.08
SHKBP1-224ENST00000600718 TRBV23-1A0A0A0MS06 115 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 MFSD2BA6NFX1 497 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 H0Y980 276 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 TNFSF12O43508 249 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 IFNA21P01568 189 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 HOXB5P09067 269 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 ZNF273Q14593 569 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 SP5Q6BEB4 398 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 ZNF841Q6ZN19 808 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 PCNPQ8WW12 178 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 ZNF714Q96N38 554 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 ABCA4P78363 2273 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 TSPAN4O14817 238 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 COX6B1P14854 86 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 UCP1P25874 307 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 FGL1Q08830 312 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 OR8B3Q8NGG8 313 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 IGFBPL1Q8WX77 278 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 NEIL1Q96FI4 390 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 C18orf12Q96KH6 178 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 TMEM56Q96MV1 263 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 OR8B2Q96RD0 313 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 GPHA2Q96T91 129 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 AGMATQ9BSE5 352 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 NMES1Q9C002 83 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 SDHAF2Q9NX18 166 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 PSG11Q9UQ72 335 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 TMEM56-RWDD3S4R434 201 aa14.56□□□□□ -0.08
SHKBP1-224ENST00000600718 EPG5Q9HCE0 2579 aa14.55□□□□□ -0.08
SHKBP1-224ENST00000600718 PIGBOS1A0A0B4J2F0 54 aa14.55□□□□□ -0.08
SHKBP1-224ENST00000600718 RNF212BA8MTL3 300 aa14.55□□□□□ -0.08
SHKBP1-224ENST00000600718 CLDN1O95832 211 aa14.55□□□□□ -0.08
SHKBP1-224ENST00000600718 C2orf50Q96LR7 162 aa14.55□□□□□ -0.08
SHKBP1-224ENST00000600718 COMMD9Q9P000 198 aa14.55□□□□□ -0.08
SHKBP1-224ENST00000600718 RPUSD1Q9UJJ7 312 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-224ENST00000600718 CLEC18AA5D8T8 446 aa14.54□□□□□ -0.08
SHKBP1-224ENST00000600718 KRBOX1C9JBD0 128 aa14.54□□□□□ -0.08
SHKBP1-224ENST00000600718 NDUFS7O75251 213 aa14.54□□□□□ -0.08
SHKBP1-224ENST00000600718 CDS2O95674 445 aa14.54□□□□□ -0.08
SHKBP1-224ENST00000600718 RAB7AP51149 207 aa14.54□□□□□ -0.08
SHKBP1-224ENST00000600718 GGNBP1Q5YKI7 109 aa14.54□□□□□ -0.08
SHKBP1-224ENST00000600718 HEPN1Q6WQI6 88 aa14.54□□□□□ -0.08
SHKBP1-224ENST00000600718 CLEC18CQ8NCF0 446 aa14.54□□□□□ -0.08
SHKBP1-224ENST00000600718 TOR1AO14656 332 aa14.54□□□□□ -0.08
SHKBP1-224ENST00000600718 ST8SIA5O15466 376 aa14.54□□□□□ -0.08
SHKBP1-224ENST00000600718 NUP62P37198 522 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-224ENST00000600718 GPR6P46095 362 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-224ENST00000600718 ZNF695Q8IW36 515 aa14.54□□□□□ -0.08
SHKBP1-224ENST00000600718 OR51H1Q8NH63 302 aa14.54□□□□□ -0.08
SHKBP1-224ENST00000600718 IL22RA2Q969J5 263 aa14.54□□□□□ -0.08
SHKBP1-224ENST00000600718 LINC00052Q96N35 136 aa14.54□□□□□ -0.08
SHKBP1-224ENST00000600718 GAB2Q9UQC2 676 aa14.54□□□□□ -0.08
SHKBP1-224ENST00000600718 ZFYVE26Q68DK2 2539 aa14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 DUXBA0A1W2PPF3 345 aa14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 NFYBP25208 207 aa14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 EIF4EBP1Q13541 118 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 PRAMEF5Q5TYX0 476 aa14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 TMEM268Q5VZI3 342 aa14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 LYZL2Q7Z4W2 148 aa14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 SELENOHQ8IZQ5 122 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 RAB39BQ96DA2 213 aa14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 ABHD14BQ96IU4 210 aa14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 OR10C1Q96KK4 312 aa14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 PATZ1Q9HBE1 687 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 ZC4H2Q9NQZ6 224 aa14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 LIN7CQ9NUP9 197 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 TMED3Q9Y3Q3 217 aa14.53□□□□□ -0.08
SHKBP1-224ENST00000600718 MPTX1A8MV57 137 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms