RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 EIF4EBP1Q13541 118 aaPredicted RBP17.08■□□□□ 0.32
PNKP-203ENST00000593946 ZNF787Q6DD87 383 aa17.08■□□□□ 0.32
PNKP-203ENST00000593946 LIAT1Q6ZQX7 453 aa17.08■□□□□ 0.32
PNKP-203ENST00000593946 LRTM2Q8N967 370 aa17.08■□□□□ 0.32
PNKP-203ENST00000593946 LEAP2Q969E1 77 aa17.08■□□□□ 0.32
PNKP-203ENST00000593946 ABHD14BQ96IU4 210 aa17.08■□□□□ 0.32
PNKP-203ENST00000593946 ABHD14AQ9BUJ0 271 aa17.08■□□□□ 0.32
PNKP-203ENST00000593946 SSBP3Q9BWW4 388 aaPredicted RBP17.08■□□□□ 0.32
PNKP-203ENST00000593946 CHIAQ9BZP6 476 aa17.08■□□□□ 0.32
PNKP-203ENST00000593946 TMEM222Q9H0R3 208 aa17.08■□□□□ 0.32
PNKP-203ENST00000593946 IFI27L2Q9H2X8 130 aa17.08■□□□□ 0.32
PNKP-203ENST00000593946 RAB18Q9NP72 206 aa17.08■□□□□ 0.32
PNKP-203ENST00000593946 H0Y980 276 aa17.07■□□□□ 0.32
PNKP-203ENST00000593946 CCSO14618 274 aa17.07■□□□□ 0.32
PNKP-203ENST00000593946 IGHV3-7P01780 117 aa17.07■□□□□ 0.32
PNKP-203ENST00000593946 RAB7AP51149 207 aa17.07■□□□□ 0.32
PNKP-203ENST00000593946 ERVFRD-1P60508 538 aa17.07■□□□□ 0.32
PNKP-203ENST00000593946 C11orf42Q8N5U0 333 aa17.07■□□□□ 0.32
PNKP-203ENST00000593946 LY6G5BQ8NDX9 201 aa17.07■□□□□ 0.32
PNKP-203ENST00000593946 ASB13Q8WXK3 278 aa17.07■□□□□ 0.32
PNKP-203ENST00000593946 C17orf98A8MV24 154 aa17.07■□□□□ 0.32
PNKP-203ENST00000593946 SLC31A2O15432 143 aa17.07■□□□□ 0.32
PNKP-203ENST00000593946 IGHV2-5P01817 119 aa17.07■□□□□ 0.32
PNKP-203ENST00000593946 SSTR2P30874 369 aa17.07■□□□□ 0.32
PNKP-203ENST00000593946 RAP2BP61225 183 aa17.07■□□□□ 0.32
PNKP-203ENST00000593946 ZFP69Q49AA0 526 aa17.07■□□□□ 0.32
PNKP-203ENST00000593946 CT45A1Q5HYN5 189 aa17.07■□□□□ 0.32
PNKP-203ENST00000593946 CT45A3Q8NHU0 189 aa17.07■□□□□ 0.32
PNKP-203ENST00000593946 WDR89Q96FK6 387 aaPredicted RBP17.07■□□□□ 0.32
PNKP-203ENST00000593946 SDHAF2Q9NX18 166 aa17.07■□□□□ 0.32
PNKP-203ENST00000593946 ABCA12Q86UK0 2595 aa17.07■□□□□ 0.32
PNKP-203ENST00000593946 GCN1Q92616 2671 aaKnown RBP17.06■□□□□ 0.32
PNKP-203ENST00000593946 PPIAL4CA0A0B4J2A2 164 aa17.06■□□□□ 0.32
PNKP-203ENST00000593946 C22orf46C9J442 243 aa17.06■□□□□ 0.32
PNKP-203ENST00000593946 SMLR1H3BR10 107 aa17.06■□□□□ 0.32
PNKP-203ENST00000593946 ADAP1O75689 374 aa17.06■□□□□ 0.32
PNKP-203ENST00000593946 B3GALNT1O75752 331 aa17.06■□□□□ 0.32
PNKP-203ENST00000593946 C1QBP02746 253 aa17.06■□□□□ 0.32
PNKP-203ENST00000593946 PPIAL4GP0DN37 164 aa17.06■□□□□ 0.32
PNKP-203ENST00000593946 UCP1P25874 307 aa17.06■□□□□ 0.32
PNKP-203ENST00000593946 SRSF4Q08170 494 aaKnown RBP17.06■□□□□ 0.32
PNKP-203ENST00000593946 Q3ZCU0 254 aa17.06■□□□□ 0.32
PNKP-203ENST00000593946 ESCO2Q56NI9 601 aa17.06■□□□□ 0.32
PNKP-203ENST00000593946 OR51H1Q8NH63 302 aa17.06■□□□□ 0.32
PNKP-203ENST00000593946 LHFPL5Q8TAF8 219 aa17.06■□□□□ 0.32
PNKP-203ENST00000593946 RAB39BQ96DA2 213 aa17.06■□□□□ 0.32
PNKP-203ENST00000593946 GPR12P47775 334 aa17.05■□□□□ 0.32
PNKP-203ENST00000593946 EIF2B2P49770 351 aaKnown RBP17.05■□□□□ 0.32
PNKP-203ENST00000593946 SRPXP78539 464 aa17.05■□□□□ 0.32
PNKP-203ENST00000593946 SLC25A48Q6ZT89 311 aaKnown RBP17.05■□□□□ 0.32
PNKP-203ENST00000593946 LGI3Q8N145 548 aa17.05■□□□□ 0.32
PNKP-203ENST00000593946 FAM168AQ92567 244 aa17.05■□□□□ 0.32
PNKP-203ENST00000593946 TMEM56Q96MV1 263 aa17.05■□□□□ 0.32
PNKP-203ENST00000593946 GSX2Q9BZM3 304 aa17.05■□□□□ 0.32
PNKP-203ENST00000593946 TMEM56-RWDD3S4R434 201 aa17.05■□□□□ 0.32
PNKP-203ENST00000593946 A0A087X0M5 115 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 A0A1B0GX30 115 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 A0A1W2PPH5 198 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 RNF212BA8MTL3 300 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 NDUFS8O00217 210 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 RBP4P02753 201 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 IGHV1-8P0DP01 117 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 OR2T35Q8NGX2 323 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 C10orf105Q8TEF2 133 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 C18orf12Q96KH6 178 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 LIN7CQ9NUP9 197 aaKnown RBP17.04■□□□□ 0.32
PNKP-203ENST00000593946 GAB2Q9UQC2 676 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 POLQO75417 2590 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 MED13LQ71F56 2210 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 A0A1W2PPE3 182 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 KIAA1324LA8MWY0 1029 aaPredicted RBP17.04■□□□□ 0.32
PNKP-203ENST00000593946 G3V3Q6 166 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 PROP1O75360 226 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 CDS2O95674 445 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 LIPFP07098 398 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 GNG10P50151 68 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 LMO4P61968 165 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 CLDND2Q8NHS1 167 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 PERPQ96FX8 193 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 PIMREGQ9BSJ6 248 aa17.04■□□□□ 0.32
PNKP-203ENST00000593946 LOC105371242A0A075B767 164 aa17.03■□□□□ 0.32
PNKP-203ENST00000593946 FAM25EA8MYX2 175 aa17.03■□□□□ 0.32
PNKP-203ENST00000593946 HOXB5P09067 269 aa17.03■□□□□ 0.32
PNKP-203ENST00000593946 KRTAP10-9P60411 292 aa17.03■□□□□ 0.32
PNKP-203ENST00000593946 CLEC2AQ6UVW9 174 aa17.03■□□□□ 0.32
PNKP-203ENST00000593946 BTNL3Q6UXE8 466 aa17.03■□□□□ 0.32
PNKP-203ENST00000593946 GSG1LQ6UXU4 331 aa17.03■□□□□ 0.32
PNKP-203ENST00000593946 NOXA1Q86UR1 476 aa17.03■□□□□ 0.32
PNKP-203ENST00000593946 ODF3L1Q8IXM7 274 aa17.03■□□□□ 0.32
PNKP-203ENST00000593946 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.03■□□□□ 0.32
PNKP-203ENST00000593946 MARVELD3Q96A59 401 aa17.03■□□□□ 0.32
PNKP-203ENST00000593946 METTL8Q9H825 291 aaKnown RBP17.03■□□□□ 0.32
PNKP-203ENST00000593946 SESN1Q9Y6P5 492 aa17.03■□□□□ 0.32
PNKP-203ENST00000593946 APCP25054 2843 aa17.03■□□□□ 0.32
PNKP-203ENST00000593946 WNK2Q9Y3S1 2297 aa17.03■□□□□ 0.32
PNKP-203ENST00000593946 C5orf51A6NDU8 294 aa17.02■□□□□ 0.32
PNKP-203ENST00000593946 MPTX1A8MV57 137 aa17.02■□□□□ 0.32
PNKP-203ENST00000593946 VWC2LB2RUY7 222 aa17.02■□□□□ 0.32
PNKP-203ENST00000593946 ZNF66Q6ZN08 573 aa17.02■□□□□ 0.32
PNKP-203ENST00000593946 C8orf31Q8N9H6 132 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms