RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 PTX4Q96A99 478 aa13.34□□□□□ -0.27
CDC42EP4-206ENST00000581014 PHF21AQ96BD5 680 aa13.34□□□□□ -0.27
CDC42EP4-206ENST00000581014 RCC1LQ96I51 464 aaKnown RBP13.34□□□□□ -0.27
CDC42EP4-206ENST00000581014 ARHGAP5-AS1Q96IT6 56 aa13.34□□□□□ -0.27
CDC42EP4-206ENST00000581014 PECRQ9BY49 303 aa13.34□□□□□ -0.27
CDC42EP4-206ENST00000581014 NECAP2Q9NVZ3 263 aa13.34□□□□□ -0.27
CDC42EP4-206ENST00000581014 LINC00527Q9UJ94 153 aa13.34□□□□□ -0.27
CDC42EP4-206ENST00000581014 STUB1Q9UNE7 303 aa13.34□□□□□ -0.27
CDC42EP4-206ENST00000581014 TMEM272A0A1B0GTI8 110 aa13.33□□□□□ -0.28
CDC42EP4-206ENST00000581014 SHISA3A0PJX4 238 aa13.33□□□□□ -0.28
CDC42EP4-206ENST00000581014 TRIM64CA6NLI5 447 aa13.33□□□□□ -0.28
CDC42EP4-206ENST00000581014 PRB2P02812 416 aaPredicted RBP13.33□□□□□ -0.28
CDC42EP4-206ENST00000581014 ZBTB25P24278 435 aa13.33□□□□□ -0.28
CDC42EP4-206ENST00000581014 MYL9P24844 172 aa13.33□□□□□ -0.28
CDC42EP4-206ENST00000581014 OR3A3P47888 321 aa13.33□□□□□ -0.28
CDC42EP4-206ENST00000581014 ACTBP60709 375 aa13.33□□□□□ -0.28
CDC42EP4-206ENST00000581014 HLA-DRB3P79483 266 aa13.33□□□□□ -0.28
CDC42EP4-206ENST00000581014 FOXE3Q13461 319 aa13.33□□□□□ -0.28
CDC42EP4-206ENST00000581014 KHDC1LQ5JSQ8 128 aa13.33□□□□□ -0.28
CDC42EP4-206ENST00000581014 ETV3LQ6ZN32 361 aa13.33□□□□□ -0.28
CDC42EP4-206ENST00000581014 TPRA1Q86W33 373 aa13.33□□□□□ -0.28
CDC42EP4-206ENST00000581014 LINC00482Q8N8I6 264 aa13.33□□□□□ -0.28
CDC42EP4-206ENST00000581014 TSPAN14Q8NG11 270 aa13.33□□□□□ -0.28
CDC42EP4-206ENST00000581014 NPBQ8NG41 125 aa13.33□□□□□ -0.28
CDC42EP4-206ENST00000581014 EDARADDQ8WWZ3 215 aa13.33□□□□□ -0.28
CDC42EP4-206ENST00000581014 HSPB9Q9BQS6 159 aa13.33□□□□□ -0.28
CDC42EP4-206ENST00000581014 HDHD3Q9BSH5 251 aaPredicted RBP13.33□□□□□ -0.28
CDC42EP4-206ENST00000581014 VCX3AQ9NNX9 186 aa13.33□□□□□ -0.28
CDC42EP4-206ENST00000581014 HLA-DRB1P01911 266 aa13.32□□□□□ -0.28
CDC42EP4-206ENST00000581014 ELANEP08246 267 aa13.32□□□□□ -0.28
CDC42EP4-206ENST00000581014 IGLL1P15814 213 aa13.32□□□□□ -0.28
CDC42EP4-206ENST00000581014 RAB6AP20340 208 aa13.32□□□□□ -0.28
CDC42EP4-206ENST00000581014 THBS3P49746 956 aa13.32□□□□□ -0.28
CDC42EP4-206ENST00000581014 MMDQ15546 238 aa13.32□□□□□ -0.28
CDC42EP4-206ENST00000581014 RITA1Q96K30 269 aa13.32□□□□□ -0.28
CDC42EP4-206ENST00000581014 CMSS1Q9BQ75 279 aaKnown RBP13.32□□□□□ -0.28
CDC42EP4-206ENST00000581014 TOLLIPQ9H0E2 274 aa13.32□□□□□ -0.28
CDC42EP4-206ENST00000581014 TXNL4BQ9NX01 149 aaKnown RBP13.32□□□□□ -0.28
CDC42EP4-206ENST00000581014 SSR3Q9UNL2 185 aa13.32□□□□□ -0.28
CDC42EP4-206ENST00000581014 KCNK7Q9Y2U2 307 aa13.32□□□□□ -0.28
CDC42EP4-206ENST00000581014 OR5H14A6NHG9 310 aa13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 ST8SIA5O15466 376 aa13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 NDUFA3O95167 84 aa13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 DIRAS3O95661 229 aa13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 IGHG4P01861 327 aa13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 CT45A6P0DMU7 189 aa13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 CT45A5P0DMU8 189 aa13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 CT45A7P0DMV0 189 aa13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 OR5H8P0DN80 308 aa13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 MC5RP33032 325 aa13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 MYCNOSP40205 109 aa13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 CDX1P47902 265 aaPredicted RBP13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 OR10A3P58181 314 aa13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 HES5Q5TA89 166 aa13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 ZNF695Q8IW36 515 aa13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 MRPL41Q8IXM3 137 aaKnown RBP13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 SETD6Q8TBK2 473 aa13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 P2RX4Q99571 388 aa13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 PARP12Q9H0J9 701 aaKnown RBP13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 C11orf54Q9H0W9 315 aaPredicted RBP13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 ZNF107Q9UII5 783 aaPredicted RBP13.31□□□□□ -0.28
CDC42EP4-206ENST00000581014 TRDCB7Z8K6 153 aa13.3□□□□□ -0.28
CDC42EP4-206ENST00000581014 RAB27BO00194 218 aa13.3□□□□□ -0.28
CDC42EP4-206ENST00000581014 NBR2O15453 112 aa13.3□□□□□ -0.28
CDC42EP4-206ENST00000581014 TMEM127O75204 238 aa13.3□□□□□ -0.28
CDC42EP4-206ENST00000581014 SCTP09683 121 aa13.3□□□□□ -0.28
CDC42EP4-206ENST00000581014 RAB3BP20337 219 aa13.3□□□□□ -0.28
CDC42EP4-206ENST00000581014 CEACAM6P40199 344 aa13.3□□□□□ -0.28
CDC42EP4-206ENST00000581014 SERPINB10P48595 397 aa13.3□□□□□ -0.28
CDC42EP4-206ENST00000581014 PLA2G7Q13093 441 aa13.3□□□□□ -0.28
CDC42EP4-206ENST00000581014 NEDD8Q15843 81 aa13.3□□□□□ -0.28
CDC42EP4-206ENST00000581014 C5orf64Q2M2E5 130 aa13.3□□□□□ -0.28
CDC42EP4-206ENST00000581014 TIMM50Q3ZCQ8 353 aa13.3□□□□□ -0.28
CDC42EP4-206ENST00000581014 FOXB2Q5VYV0 432 aa13.3□□□□□ -0.28
CDC42EP4-206ENST00000581014 C22orf42Q6IC83 251 aa13.3□□□□□ -0.28
CDC42EP4-206ENST00000581014 OR5AN1Q8NGI8 311 aa13.3□□□□□ -0.28
CDC42EP4-206ENST00000581014 RAB3CQ96E17 227 aa13.3□□□□□ -0.28
CDC42EP4-206ENST00000581014 RBMXL1Q96E39 390 aaKnown RBP13.3□□□□□ -0.28
CDC42EP4-206ENST00000581014 RNF5Q99942 180 aa13.3□□□□□ -0.28
CDC42EP4-206ENST00000581014 OR1A1Q9P1Q5 309 aa13.3□□□□□ -0.28
CDC42EP4-206ENST00000581014 IGKV1-6A0A0C4DH72 117 aa13.29□□□□□ -0.28
CDC42EP4-206ENST00000581014 PROP1O75360 226 aa13.29□□□□□ -0.28
CDC42EP4-206ENST00000581014 RBBP9O75884 186 aa13.29□□□□□ -0.28
CDC42EP4-206ENST00000581014 RPLP1P05386 114 aaKnown RBP13.29□□□□□ -0.28
CDC42EP4-206ENST00000581014 CD36P16671 472 aa13.29□□□□□ -0.28
CDC42EP4-206ENST00000581014 VDAC1P21796 283 aa13.29□□□□□ -0.28
CDC42EP4-206ENST00000581014 PSMB8P28062 276 aa13.29□□□□□ -0.28
CDC42EP4-206ENST00000581014 PPIFP30405 207 aaKnown RBP13.29□□□□□ -0.28
CDC42EP4-206ENST00000581014 RPL39P5Q59GN2 51 aa13.29□□□□□ -0.28
CDC42EP4-206ENST00000581014 CXorf66Q5JRM2 361 aaPredicted RBP13.29□□□□□ -0.28
CDC42EP4-206ENST00000581014 C18orf65Q6ZTR6 163 aa13.29□□□□□ -0.28
CDC42EP4-206ENST00000581014 C8orf86Q6ZUL3 223 aa13.29□□□□□ -0.28
CDC42EP4-206ENST00000581014 NR2C2APQ86WQ0 139 aa13.29□□□□□ -0.28
CDC42EP4-206ENST00000581014 OR4A4PQ8NGN8 299 aa13.29□□□□□ -0.28
CDC42EP4-206ENST00000581014 OR10R2Q8NGX6 335 aa13.29□□□□□ -0.28
CDC42EP4-206ENST00000581014 KCTD7Q96MP8 289 aa13.29□□□□□ -0.28
CDC42EP4-206ENST00000581014 GPR61Q9BZJ8 451 aa13.29□□□□□ -0.28
CDC42EP4-206ENST00000581014 IGHV7-81A0A0B4J1V7 117 aa13.28□□□□□ -0.28
CDC42EP4-206ENST00000581014 METTL21EPA6NDL7 271 aa13.28□□□□□ -0.28
CDC42EP4-206ENST00000581014 NOTOA8MTQ0 251 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms