RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 ZNF580Q9UK33 172 aa10.39□□□□□ -0.75
HNRNPC-205ENST00000553300 DUS4LO95620 317 aaKnown RBP10.38□□□□□ -0.75
HNRNPC-205ENST00000553300 CD3GP09693 182 aa10.38□□□□□ -0.75
HNRNPC-205ENST00000553300 OR5H8P0DN80 308 aa10.38□□□□□ -0.75
HNRNPC-205ENST00000553300 PSMB9P28065 219 aa10.38□□□□□ -0.75
HNRNPC-205ENST00000553300 MC5RP33032 325 aa10.38□□□□□ -0.75
HNRNPC-205ENST00000553300 F2RL1P55085 397 aa10.38□□□□□ -0.75
HNRNPC-205ENST00000553300 HLA-DRB3P79483 266 aa10.38□□□□□ -0.75
HNRNPC-205ENST00000553300 C22orf42Q6IC83 251 aa10.38□□□□□ -0.75
HNRNPC-205ENST00000553300 C10orf99Q6UWK7 81 aa10.38□□□□□ -0.75
HNRNPC-205ENST00000553300 C5orf24Q7Z6I8 188 aa10.38□□□□□ -0.75
HNRNPC-205ENST00000553300 TPRA1Q86W33 373 aa10.38□□□□□ -0.75
HNRNPC-205ENST00000553300 OR10R2Q8NGX6 335 aa10.38□□□□□ -0.75
HNRNPC-205ENST00000553300 ZNF251Q9BRH9 671 aa10.38□□□□□ -0.75
HNRNPC-205ENST00000553300 STUB1Q9UNE7 303 aa10.38□□□□□ -0.75
HNRNPC-205ENST00000553300 OR5H14A6NHG9 310 aa10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 TRDCB7Z8K6 153 aa10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 ST8SIA5O15466 376 aa10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 DIRAS3O95661 229 aa10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 IGF1P05019 195 aa10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 ELANEP08246 267 aa10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 OR3A3P47888 321 aa10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 SERPINB10P48595 397 aa10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 OR10A3P58181 314 aa10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 ACTBP60709 375 aa10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 RPL23AP62750 156 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 KIR2DS1Q14954 304 aa10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 MMDQ15546 238 aa10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 PLAC9Q5JTB6 97 aa10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 Q6ZPA2 131 aa10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 OR4A4PQ8NGN8 299 aa10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 AGMATQ9BSE5 352 aa10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 HDHD3Q9BSH5 251 aaPredicted RBP10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 MRPL20Q9BYC9 149 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 LINC00527Q9UJ94 153 aa10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 SSR3Q9UNL2 185 aa10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 PRKDCP78527 4128 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-205ENST00000553300 SHISA3A0PJX4 238 aa10.36□□□□□ -0.75
HNRNPC-205ENST00000553300 LINC01548A6NM66 108 aa10.36□□□□□ -0.75
HNRNPC-205ENST00000553300 NOTOA8MTQ0 251 aa10.36□□□□□ -0.75
HNRNPC-205ENST00000553300 SCTP09683 121 aa10.36□□□□□ -0.75
HNRNPC-205ENST00000553300 VDAC1P21796 283 aa10.36□□□□□ -0.75
HNRNPC-205ENST00000553300 FOXE3Q13461 319 aa10.36□□□□□ -0.75
HNRNPC-205ENST00000553300 SRSF7Q16629 238 aaKnown RBP eCLIP10.36□□□□□ -0.751e-12■■□□□ 11.4
HNRNPC-205ENST00000553300 OXLD1Q5BKU9 147 aa10.36□□□□□ -0.75
HNRNPC-205ENST00000553300 ZNF773Q6PK81 442 aa10.36□□□□□ -0.75
HNRNPC-205ENST00000553300 NPBQ8NG41 125 aa10.36□□□□□ -0.75
HNRNPC-205ENST00000553300 RCC1LQ96I51 464 aaKnown RBP10.36□□□□□ -0.75
HNRNPC-205ENST00000553300 RNF5Q99942 180 aa10.36□□□□□ -0.75
HNRNPC-205ENST00000553300 C11orf54Q9H0W9 315 aaPredicted RBP10.36□□□□□ -0.75
HNRNPC-205ENST00000553300 TXNL4BQ9NX01 149 aaKnown RBP10.36□□□□□ -0.75
HNRNPC-205ENST00000553300 KIAA1456Q9P272 454 aa10.36□□□□□ -0.75
HNRNPC-205ENST00000553300 ZNF107Q9UII5 783 aaPredicted RBP10.36□□□□□ -0.75
HNRNPC-205ENST00000553300 RAB27BO00194 218 aa10.35□□□□□ -0.75
HNRNPC-205ENST00000553300 NBR2O15453 112 aa10.35□□□□□ -0.75
HNRNPC-205ENST00000553300 RBBP9O75884 186 aa10.35□□□□□ -0.75
HNRNPC-205ENST00000553300 SCGNO76038 276 aa10.35□□□□□ -0.75
HNRNPC-205ENST00000553300 HLA-DRB1P01911 266 aa10.35□□□□□ -0.75
HNRNPC-205ENST00000553300 HIST1H1DP16402 221 aaKnown RBP10.35□□□□□ -0.75
HNRNPC-205ENST00000553300 CXorf66Q5JRM2 361 aaPredicted RBP10.35□□□□□ -0.75
HNRNPC-205ENST00000553300 RNF152Q8N8N0 203 aa10.35□□□□□ -0.75
HNRNPC-205ENST00000553300 OR5AN1Q8NGI8 311 aa10.35□□□□□ -0.75
HNRNPC-205ENST00000553300 GPR61Q9BZJ8 451 aa10.35□□□□□ -0.75
HNRNPC-205ENST00000553300 TOLLIPQ9H0E2 274 aa10.35□□□□□ -0.75
HNRNPC-205ENST00000553300 NECAP2Q9NVZ3 263 aa10.35□□□□□ -0.75
HNRNPC-205ENST00000553300 ZNF221Q9UK13 617 aa10.35□□□□□ -0.75
HNRNPC-205ENST00000553300 KCNK7Q9Y2U2 307 aa10.35□□□□□ -0.75
HNRNPC-205ENST00000553300 NUDT19A8MXV4 375 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 MFNGO00587 321 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 FABP7O15540 132 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 NDUFA3O95167 84 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 IGHG4P01861 327 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 CT45A6P0DMU7 189 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 CT45A5P0DMU8 189 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 CT45A7P0DMV0 189 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 SLC2A2P11168 524 aaPredicted RBP10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 TALDO1P37837 337 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 MYCNOSP40205 109 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 PLA2G7Q13093 441 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 C5orf64Q2M2E5 130 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 MOGAT2Q3SYC2 334 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 KCTD21Q4G0X4 260 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 LIN54Q6MZP7 749 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 Q6ZS49 121 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 ZNF695Q8IW36 515 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 ABHD14BQ96IU4 210 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 KCTD7Q96MP8 289 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 HSPB9Q9BQS6 159 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.34□□□□□ -0.758e-8■■■□□ 16.6
HNRNPC-205ENST00000553300 RDH8Q9NYR8 311 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 OR1A1Q9P1Q5 309 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 WASHC3Q9Y3C0 194 aa10.34□□□□□ -0.75
HNRNPC-205ENST00000553300 H0YJW9 148 aa10.33□□□□□ -0.76
HNRNPC-205ENST00000553300 H7C2Y5 167 aa10.33□□□□□ -0.76
HNRNPC-205ENST00000553300 FCGR3AP08637 254 aa10.33□□□□□ -0.76
HNRNPC-205ENST00000553300 GSTP1P09211 210 aaKnown RBP10.33□□□□□ -0.76
HNRNPC-205ENST00000553300 GNB3P16520 340 aa10.33□□□□□ -0.76
HNRNPC-205ENST00000553300 CDX1P47902 265 aaPredicted RBP10.33□□□□□ -0.76
HNRNPC-205ENST00000553300 THBS3P49746 956 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms