RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 DYRK2Q92630 601 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 TMEM186Q96B77 213 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 MSI2Q96DH6 328 aaKnown RBP4.69□□□□□ -1.66
SCAF11-213ENST00000550629 ZNF714Q96N38 554 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 CMSS1Q9BQ75 279 aaKnown RBP4.69□□□□□ -1.66
SCAF11-213ENST00000550629 METTL8Q9H825 291 aaKnown RBP4.69□□□□□ -1.66
SCAF11-213ENST00000550629 CHMP1AQ9HD42 196 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-213ENST00000550629 C19orf12Q9NSK7 152 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 KCNIP1Q9NZI2 227 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 ZNF107Q9UII5 783 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-213ENST00000550629 AK3Q9UIJ7 227 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 TRAPPC2LQ9UL33 140 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 INSIG2Q9Y5U4 225 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 V9GYH0 126 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 ZANQ9Y493 2812 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 CSMD1Q96PZ7 3565 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 NBPF19A0A087WUL8 3843 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 A0A087X0M5 115 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 A0A1B0GX30 115 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 C17orf98A8MV24 154 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 TRDCB7Z8K6 153 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 C12orf77C9JDV5 145 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 NPIPB11E5RHQ5 1161 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 GABARAPH6UMI1 98 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 GSTZ1O43708 216 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-213ENST00000550629 CD5LO43866 347 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 SSX5O60225 188 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 TGFAP01135 160 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 CTXN2P0C2S0 81 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 CD99P14209 185 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 RCC1P18754 421 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-213ENST00000550629 PRTN3P24158 256 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 RCVRNP35243 200 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 LINC00205P59089 165 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 HTD2P86397 168 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 PAX8Q06710 450 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 IL18Q14116 193 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 HMGN3Q15651 99 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 Q3ZCU0 254 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 LY6G6FQ5SQ64 297 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 METTL11BQ5VVY1 283 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 DCAF12L2Q5VW00 463 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 OLFML2AQ68BL7 652 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 NCR3LG1Q68D85 454 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 OR52W1Q6IF63 320 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 CCDC144NLQ6NUI1 221 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 FAM131AQ6UXB0 335 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 TCF23Q7RTU1 214 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 TRAPPC6BQ86SZ2 158 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 HOGA1Q86XE5 327 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 FAM185AQ8N0U4 392 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 CIARTQ8N365 385 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-213ENST00000550629 GDPD1Q8N9F7 314 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 C8orf31Q8N9H6 132 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 OR4A4PQ8NGN8 299 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 OR13A1Q8NGR1 328 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 GPX8Q8TED1 209 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 SMIM4Q8WVI0 70 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 FCAMRQ8WWV6 532 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 DEDD2Q8WXF8 326 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 GALMQ96C23 342 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 ABHD1Q96SE0 405 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 SIRPDQ9H106 197 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 TAF9BQ9HBM6 251 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 Q9N2K0 584 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 HIF1ANQ9NWT6 349 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 TMEM160Q9NX00 188 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 TAS2R8Q9NYW2 309 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 CALYQ9NYX4 217 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 ANAPC10Q9UM13 185 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 MRPS7Q9Y2R9 242 aaKnown RBP4.68□□□□□ -1.66
SCAF11-213ENST00000550629 HIVEP1P15822 2718 aa4.68□□□□□ -1.66
SCAF11-213ENST00000550629 C15orf65H3BRN8 121 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 FABP7O15540 132 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 RBBP9O75884 186 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 IGHV1-8P0DP01 117 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 MMP9P14780 707 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 ZBTB25P24278 435 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 CD34P28906 385 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 GLP1RP43220 463 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 TAS2R46P59540 309 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 BPIFB3P59826 476 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 HLA-DRB3P79483 266 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 ZNF273Q14593 569 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 C17orf58Q2M2W7 97 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 ACTBL2Q562R1 376 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 FAM209BQ5JX69 171 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 ACSM6Q6P461 480 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 RTN4RL2Q86UN3 420 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 SNX29P2Q8IUI4 249 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 FGFRL1Q8N441 504 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 C11orf42Q8N5U0 333 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 Q8N7P7 452 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 TPRX1Q8N7U7 411 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 MAPK1IP1LQ8NDC0 245 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 OR4K15Q8NH41 348 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 MRGPRDQ8TDS7 321 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 NUDCD2Q8WVJ2 157 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 TNFRSF14Q92956 283 aa4.67□□□□□ -1.66
SCAF11-213ENST00000550629 ARL11Q969Q4 196 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 9139.2 ms