RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 SP5Q6BEB4 398 aaPredicted RBP15.5■□□□□ 0.07
PRPF40B-208ENST00000548436 C1orf174Q8IYL3 243 aa15.5■□□□□ 0.07
PRPF40B-208ENST00000548436 ZBTB34Q8NCN2 500 aa15.5■□□□□ 0.07
PRPF40B-208ENST00000548436 M0R1B8 84 aa15.5■□□□□ 0.07
PRPF40B-208ENST00000548436 METTL15P1P0C7V9 234 aa15.5■□□□□ 0.07
PRPF40B-208ENST00000548436 EIF2S3P41091 472 aaKnown RBP15.5■□□□□ 0.07
PRPF40B-208ENST00000548436 AKR1C3P42330 323 aa15.5■□□□□ 0.07
PRPF40B-208ENST00000548436 BRWD1-AS2P59051 145 aa15.5■□□□□ 0.07
PRPF40B-208ENST00000548436 HAPLN4Q86UW8 402 aa15.5■□□□□ 0.07
PRPF40B-208ENST00000548436 RBMXL3Q8N7X1 1067 aaKnown RBP15.5■□□□□ 0.07
PRPF40B-208ENST00000548436 DCTN5Q9BTE1 182 aa15.5■□□□□ 0.07
PRPF40B-208ENST00000548436 KCNJ16Q9NPI9 418 aa15.5■□□□□ 0.07
PRPF40B-208ENST00000548436 WASF3Q9UPY6 502 aa15.5■□□□□ 0.07
PRPF40B-208ENST00000548436 IGHV3-43A0A0B4J1X8 118 aa15.49■□□□□ 0.07
PRPF40B-208ENST00000548436 IGHV3-43DP0DP04 118 aa15.49■□□□□ 0.07
PRPF40B-208ENST00000548436 SPRNQ5BIV9 151 aa15.49■□□□□ 0.07
PRPF40B-208ENST00000548436 THNSL2Q86YJ6 484 aa15.49■□□□□ 0.07
PRPF40B-208ENST00000548436 RFESDQ8TAC1 157 aa15.49■□□□□ 0.07
PRPF40B-208ENST00000548436 NINJ1Q92982 152 aa15.49■□□□□ 0.07
PRPF40B-208ENST00000548436 LURAP1Q96LR2 239 aa15.49■□□□□ 0.07
PRPF40B-208ENST00000548436 SLC35B3Q9H1N7 401 aa15.49■□□□□ 0.07
PRPF40B-208ENST00000548436 MMP24Q9Y5R2 645 aa15.49■□□□□ 0.07
PRPF40B-208ENST00000548436 DOCK11Q5JSL3 2073 aa15.49■□□□□ 0.07
PRPF40B-208ENST00000548436 NBEAQ8NFP9 2946 aa15.49■□□□□ 0.07
PRPF40B-208ENST00000548436 PRDX2P32119 198 aa15.48■□□□□ 0.07
PRPF40B-208ENST00000548436 FLI1Q01543 452 aaPredicted RBP15.48■□□□□ 0.07
PRPF40B-208ENST00000548436 ZNF816Q0VGE8 651 aaPredicted RBP15.48■□□□□ 0.07
PRPF40B-208ENST00000548436 TIMM23BQ5SRD1 257 aa15.48■□□□□ 0.07
PRPF40B-208ENST00000548436 AKR1C8PQ5T2L2 129 aa15.48■□□□□ 0.07
PRPF40B-208ENST00000548436 BTNL3Q6UXE8 466 aa15.48■□□□□ 0.07
PRPF40B-208ENST00000548436 C17orf98A8MV24 154 aa15.48■□□□□ 0.07
PRPF40B-208ENST00000548436 ZNF737O75373 536 aa15.48■□□□□ 0.07
PRPF40B-208ENST00000548436 KRASP01116 189 aa15.48■□□□□ 0.07
PRPF40B-208ENST00000548436 IFNA5P01569 189 aa15.48■□□□□ 0.07
PRPF40B-208ENST00000548436 OR13C7P0DN81 318 aa15.48■□□□□ 0.07
PRPF40B-208ENST00000548436 G6PCP35575 357 aa15.48■□□□□ 0.07
PRPF40B-208ENST00000548436 AWAT1Q58HT5 328 aa15.48■□□□□ 0.07
PRPF40B-208ENST00000548436 C1orf185Q5T7R7 199 aa15.48■□□□□ 0.07
PRPF40B-208ENST00000548436 RXFP4Q8TDU9 374 aa15.48■□□□□ 0.07
PRPF40B-208ENST00000548436 COA4Q9NYJ1 87 aa15.48■□□□□ 0.07
PRPF40B-208ENST00000548436 IGKV1D-17A0A075B6S4 117 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 RBFOX3A6NFN3 312 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 SRRM5B3KS81 715 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 C15orf65H3BRN8 121 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 P0C879 139 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 LINC00205P59089 165 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 UBE2KP61086 200 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 MZT1Q08AG7 82 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 EDDM3AQ14507 147 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 ZNF525Q8N782 197 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 RSG1Q9BU20 258 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 RPS10P5Q9NQ39 176 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 COLCA2A8K830 154 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 DEFB108AA8MXU0 73 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 KLK10O43240 276 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 S1PR2O95136 353 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 SPANXN5Q5MJ07 72 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 SLC25A24Q6NUK1 477 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 CLCC1Q96S66 551 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 AIFM2Q9BRQ8 373 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 C20orf24Q9BUV8 137 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 SMCO4Q9NRQ5 59 aa15.47■□□□□ 0.07
PRPF40B-208ENST00000548436 FAM90A26D6RGX4 464 aa15.46■□□□□ 0.07
PRPF40B-208ENST00000548436 IGHV3-13P01766 116 aa15.46■□□□□ 0.07
PRPF40B-208ENST00000548436 SNRNP70P08621 437 aaKnown RBP15.46■□□□□ 0.07
PRPF40B-208ENST00000548436 PAX5Q02548 391 aa15.46■□□□□ 0.07
PRPF40B-208ENST00000548436 TNFRSF9Q07011 255 aa15.46■□□□□ 0.07
PRPF40B-208ENST00000548436 SFT2D1Q8WV19 159 aa15.46■□□□□ 0.07
PRPF40B-208ENST00000548436 TCTEX1D2Q8WW35 142 aa15.46■□□□□ 0.07
PRPF40B-208ENST00000548436 RBKSQ9H477 322 aa15.46■□□□□ 0.07
PRPF40B-208ENST00000548436 MLXQ9UH92 298 aa15.46■□□□□ 0.07
PRPF40B-208ENST00000548436 DSCAMO60469 2012 aa15.46■□□□□ 0.06
PRPF40B-208ENST00000548436 IGHV3OR15-7A0A075B7D8 119 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 C7orf77A4D0Y5 90 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 BTBD17A6NE02 478 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 ST8SIA5O15466 376 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 CATR1Q13166 79 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 VHLLQ6RSH7 139 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 GCSAMQ8N6F7 178 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 OR2V2Q96R30 315 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 AGMATQ9BSE5 352 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 KIAA1456Q9P272 454 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 GVINP1Q7Z2Y8 2422 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 ICE1Q9Y2F5 2266 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 LINC00473A8K010 186 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 M0R036 132 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 CLDN1O95832 211 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 CRYAAP02489 173 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 CRYBA1P05813 215 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 TIMP3P35625 211 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 NKX6-1P78426 367 aaPredicted RBP15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 MSMO1Q15800 293 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 HAGHQ16775 308 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 LTC4SQ16873 150 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 DPPA3Q6W0C5 159 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 KDF1Q8NAX2 398 aaPredicted RBP15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 SNIP1Q8TAD8 396 aaKnown RBP15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 CD300LFQ8TDQ1 290 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 HIPK2Q9H2X6 1198 aa15.45■□□□□ 0.06
PRPF40B-208ENST00000548436 SMDT1Q9H4I9 107 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms