RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 FAM90A22PA8MWA6 464 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 FAM90A12PA8MX19 464 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 FAM90A5PA8MXJ8 464 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 FAM90A23PA8MXZ1 464 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 TRGC2P03986 189 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 FAM90A15PP0C7V4 464 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 FAM90A13PP0C7W8 464 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 FAM90A14PP0C7W9 464 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 FAM90A24PP0C7X0 464 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 RAB2AP61019 212 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 TLE4Q04727 773 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 IL24Q13007 206 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 RNPS1Q15287 305 aaKnown RBP11.51□□□□□ -0.57
BNIP3-202ENST00000540159 RHEBQ15382 184 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 FIP1L1Q6UN15 594 aaKnown RBP11.51□□□□□ -0.57
BNIP3-202ENST00000540159 KLF13Q9Y2Y9 288 aaPredicted RBP11.51□□□□□ -0.57
BNIP3-202ENST00000540159 TNCP24821 2201 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 CLEC18AA5D8T8 446 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 C19orf67A6NJJ6 358 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 OR5H1A6NKK0 313 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 IFNA4P05014 189 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 WDR25Q64LD2 544 aaPredicted RBP11.51□□□□□ -0.57
BNIP3-202ENST00000540159 SPNS3Q6ZMD2 512 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 CLEC18CQ8NCF0 446 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 RPUSD4Q96CM3 377 aaKnown RBP11.51□□□□□ -0.57
BNIP3-202ENST00000540159 MUCL1Q96DR8 90 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 IFT22Q9H7X7 185 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 MIOXQ9UGB7 285 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 CEP295Q9C0D2 2601 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 LMO1P25800 156 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 CD200P41217 278 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 GLIPR1P48060 266 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 SAXO1Q8IYX7 474 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 EGLN1Q9GZT9 426 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 TREM2Q9NZC2 230 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 ABCA1O95477 2261 aa11.51□□□□□ -0.57
BNIP3-202ENST00000540159 ST8SIA5O15466 376 aa11.5□□□□□ -0.57
BNIP3-202ENST00000540159 SS18L1O75177 396 aaPredicted RBP11.5□□□□□ -0.57
BNIP3-202ENST00000540159 S1PR2O95136 353 aa11.5□□□□□ -0.57
BNIP3-202ENST00000540159 HAND1O96004 215 aa11.5□□□□□ -0.57
BNIP3-202ENST00000540159 FABP1P07148 127 aa11.5□□□□□ -0.57
BNIP3-202ENST00000540159 VHLLQ6RSH7 139 aa11.5□□□□□ -0.57
BNIP3-202ENST00000540159 VKORC1L1Q8N0U8 176 aa11.5□□□□□ -0.57
BNIP3-202ENST00000540159 TCTEX1D2Q8WW35 142 aa11.5□□□□□ -0.57
BNIP3-202ENST00000540159 RCC1LQ96I51 464 aaKnown RBP11.5□□□□□ -0.57
BNIP3-202ENST00000540159 DDA1Q9BW61 102 aa11.5□□□□□ -0.57
BNIP3-202ENST00000540159 RBKSQ9H477 322 aa11.5□□□□□ -0.57
BNIP3-202ENST00000540159 C12orf77C9JDV5 145 aa11.5□□□□□ -0.57
BNIP3-202ENST00000540159 IGKV1D-33P01593 117 aa11.5□□□□□ -0.57
BNIP3-202ENST00000540159 IGKV1-33P01594 117 aa11.5□□□□□ -0.57
BNIP3-202ENST00000540159 EGR1P18146 543 aa11.5□□□□□ -0.57
BNIP3-202ENST00000540159 ELOBQ15370 118 aa11.5□□□□□ -0.57
BNIP3-202ENST00000540159 NRN1LQ496H8 165 aa11.5□□□□□ -0.57
BNIP3-202ENST00000540159 KLF14Q8TD94 323 aaPredicted RBP11.5□□□□□ -0.57
BNIP3-202ENST00000540159 GTF3AQ92664 365 aaKnown RBP11.5□□□□□ -0.57
BNIP3-202ENST00000540159 C5orf30Q96GV9 206 aa11.5□□□□□ -0.57
BNIP3-202ENST00000540159 ZPBPQ9BS86 351 aa11.5□□□□□ -0.57
BNIP3-202ENST00000540159 DUSP13Q9UII6 198 aa11.5□□□□□ -0.57
BNIP3-202ENST00000540159 SVEP1Q4LDE5 3571 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 YLPM1P49750 1951 aaKnown RBP11.49□□□□□ -0.57
BNIP3-202ENST00000540159 C17orf98A8MV24 154 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 UBE2CO00762 179 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 ZG16O60844 167 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 SP9P0CG40 484 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 FOLR2P14207 255 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 BAXQ07812 192 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 FOXF2Q12947 444 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 HEPN1Q6WQI6 88 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 ZNF497Q6ZNH5 498 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 ZNF525Q8N782 197 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 GPR87Q9BY21 358 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 A0A1B0GU03 582 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 AP4M1O00189 453 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 MLNRO43193 412 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 COX5BP10606 129 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 RTP5Q14D33 572 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 ADIRFQ15847 76 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 Q6ZS49 121 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 MDS2Q8NDY4 140 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 NANOS1Q8WY41 292 aaKnown RBP11.49□□□□□ -0.57
BNIP3-202ENST00000540159 TVP23CQ96ET8 276 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 TMEM9BQ9NQ34 198 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 GSN-AS1Q9NRJ2 163 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 SH2D1BO14796 132 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 TIMM8AO60220 97 aaPredicted RBP11.49□□□□□ -0.57
BNIP3-202ENST00000540159 PTBP3O95758 552 aaKnown RBP11.49□□□□□ -0.57
BNIP3-202ENST00000540159 SLC38A11Q08AI6 406 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 Q3ZCU0 254 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 LEAP2Q969E1 77 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 DOK5Q9P104 306 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 ATPIF1Q9UII2 106 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 PSG11Q9UQ72 335 aa11.49□□□□□ -0.57
BNIP3-202ENST00000540159 IGHV3OR15-7A0A075B7D8 119 aa11.48□□□□□ -0.57
BNIP3-202ENST00000540159 GALR2O43603 387 aaPredicted RBP11.48□□□□□ -0.57
BNIP3-202ENST00000540159 IFNA17P01571 189 aa11.48□□□□□ -0.57
BNIP3-202ENST00000540159 FDCSPQ8NFU4 85 aa11.48□□□□□ -0.57
BNIP3-202ENST00000540159 LHX4Q969G2 390 aa11.48□□□□□ -0.57
BNIP3-202ENST00000540159 RAB40CQ96S21 281 aa11.48□□□□□ -0.57
BNIP3-202ENST00000540159 TMEM204Q9BSN7 226 aa11.48□□□□□ -0.57
BNIP3-202ENST00000540159 RIMS4Q9H426 269 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms