RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 DEFB109BQ30KR1 87 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 TTC32Q5I0X7 151 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 HIST2H3PS2Q5TEC6 136 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 GFI1BQ5VTD9 330 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 OR10AD1Q8NGE0 317 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 NEIL3Q8TAT5 605 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 Q8WTZ3 238 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 CT55Q8WUE5 264 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 BLNKQ8WV28 456 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 EEF1AKMT1Q8WVE0 214 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 RASSF5Q8WWW0 418 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 ASB17Q8WXJ9 295 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 ZNF501Q96CX3 271 aaPredicted RBP4.57□□□□□ -1.68
MRE11-209ENST00000540013 SEH1LQ96EE3 360 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 TMED9Q9BVK6 235 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 TAPBPLQ9BX59 468 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 SLIRPQ9GZT3 109 aaKnown RBP4.57□□□□□ -1.68
MRE11-209ENST00000540013 DEFB127Q9H1M4 99 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 ZNF629Q9UEG4 869 aaPredicted RBP4.57□□□□□ -1.68
MRE11-209ENST00000540013 HHLA2Q9UM44 414 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 ERGIC3Q9Y282 383 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 LSM5Q9Y4Y9 91 aaKnown RBP4.57□□□□□ -1.68
MRE11-209ENST00000540013 LRRK2Q5S007 2527 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 PCNX1Q96RV3 2341 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 PRRC2CQ9Y520 2896 aaKnown RBP4.57□□□□□ -1.68
MRE11-209ENST00000540013 POLEQ07864 2286 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 CACNA1DQ01668 2161 aa4.57□□□□□ -1.68
MRE11-209ENST00000540013 ASH1LQ9NR48 2969 aaKnown RBP4.56□□□□□ -1.68
MRE11-209ENST00000540013 COL12A1Q99715 3063 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 E7EQ34 232 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 H0Y9J4 135 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 FOXH1O75593 365 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 RP2O75695 350 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 IFNA21P01568 189 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 GUSBP08236 651 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 NBEAP1P0C6P0 100 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 GTF2F2P13984 249 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 CCR7P32248 378 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 BTCP35070 178 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 VSX2P58304 361 aaPredicted RBP4.56□□□□□ -1.68
MRE11-209ENST00000540013 CACNG7P62955 275 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 CRADDP78560 199 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 PRDX1Q06830 199 aaKnown RBP4.56□□□□□ -1.68
MRE11-209ENST00000540013 SMAGPQ0VAQ4 97 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 SPCS2Q15005 226 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 TMEM97Q5BJF2 176 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 MYO7BQ6PIF6 2116 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 XKRXQ6PP77 449 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 REG3GQ6UW15 175 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 UGT2A3Q6UWM9 527 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 TEX43Q6ZNM6 134 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 RASSF6Q6ZTQ3 369 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 COMMD7Q86VX2 200 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 NKAPP1Q8N9T2 125 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 AQP11Q8NBQ7 271 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 C11orf72Q8NBR9 251 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 OR1N2Q8NGR9 330 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 OR10J5Q8NHC4 309 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 VN1R17PQ8TDU5 208 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 LRRC29Q8WV35 223 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 GALNT14Q96FL9 552 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 RNF185Q96GF1 192 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 NRTNQ99748 197 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 TRIM15Q9C019 465 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 TRIM4Q9C037 500 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 FBXL15Q9H469 300 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 SDF2L1Q9HCN8 221 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 MIEF1Q9NQG6 463 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 PRO0628Q9UI54 55 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 ORC6Q9Y5N6 252 aa4.56□□□□□ -1.68
MRE11-209ENST00000540013 A0A0J9YY10 115 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 RPL37AP8A6NKH3 93 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 PLIN3O60664 434 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 REM1O75628 298 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 MOSP00540 346 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 CSF3P09919 207 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 CD1EP15812 388 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 AKR1C4P17516 323 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 RAB3BP20337 219 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 RPS3P23396 243 aaKnown RBP eCLIP4.55□□□□□ -1.68
MRE11-209ENST00000540013 PEBP1P30086 187 aaKnown RBP4.55□□□□□ -1.68
MRE11-209ENST00000540013 IL2RGP31785 369 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 GGT2P36268 569 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 RPS23P62266 143 aaKnown RBP4.55□□□□□ -1.68
MRE11-209ENST00000540013 CD300CQ08708 224 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 DEFB110Q30KQ9 67 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 OR2B11Q5JQS5 317 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 ZNF506Q5JVG8 444 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 CLEC12AQ5QGZ9 265 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 ADAMTSL4-AS1Q5T5F5 129 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 C9orf66Q5T8R8 295 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 C1orf195Q5TG92 126 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 FAM71E1Q6IPT2 247 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 SPNS3Q6ZMD2 512 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 ZNF329Q86UD4 541 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 ARIH2OSQ8N7S6 290 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 WDSUB1Q8N9V3 476 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 CSNK1G2-AS1Q8NCQ2 148 aa4.55□□□□□ -1.68
MRE11-209ENST00000540013 GEMIN6Q8WXD5 167 aaKnown RBP4.55□□□□□ -1.68
MRE11-209ENST00000540013 RDH5Q92781 318 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms