RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 C20orf204Q6ZNR8 217 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 TMEM144Q7Z5S9 345 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 ZNF573Q86YE8 665 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 OR10G9Q8NGN4 311 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 OR10G7Q8NGN6 311 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 WDYHV1Q96HA8 205 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 UBE2ZQ9H832 354 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-205ENST00000539661 SLC25A22Q9H936 323 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 SH2D2AQ9NP31 389 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 IL36RNQ9UBH0 155 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 PXMP4Q9Y6I8 212 aa14.93□□□□□ -0.02
RAB40C-205ENST00000539661 PI4KAP42356 2102 aa14.92□□□□□ -0.02
RAB40C-205ENST00000539661 LOC102723996A0A087X1L8 192 aa14.92□□□□□ -0.02
RAB40C-205ENST00000539661 IGLV2-14P01704 120 aa14.92□□□□□ -0.02
RAB40C-205ENST00000539661 KCNE4Q8WWG9 221 aa14.92□□□□□ -0.02
RAB40C-205ENST00000539661 TMEM147Q9BVK8 224 aa14.92□□□□□ -0.02
RAB40C-205ENST00000539661 TRAPPC1Q9Y5R8 145 aa14.92□□□□□ -0.02
RAB40C-205ENST00000539661 RPLP1P05386 114 aaKnown RBP14.92□□□□□ -0.02
RAB40C-205ENST00000539661 COX5AP20674 150 aa14.92□□□□□ -0.02
RAB40C-205ENST00000539661 CARD18P57730 90 aa14.92□□□□□ -0.02
RAB40C-205ENST00000539661 UBE2NP61088 152 aaKnown RBP14.92□□□□□ -0.02
RAB40C-205ENST00000539661 PPP1CBP62140 327 aa14.92□□□□□ -0.02
RAB40C-205ENST00000539661 FOXL1Q12952 345 aa14.92□□□□□ -0.02
RAB40C-205ENST00000539661 ZNF585BQ52M93 769 aa14.92□□□□□ -0.02
RAB40C-205ENST00000539661 MRPL14Q6P1L8 145 aaKnown RBP14.92□□□□□ -0.02
RAB40C-205ENST00000539661 MS4A10Q96PG2 267 aa14.92□□□□□ -0.02
RAB40C-205ENST00000539661 TMPRSS2O15393 492 aa14.91□□□□□ -0.02
RAB40C-205ENST00000539661 DLEU1O43261 78 aa14.91□□□□□ -0.02
RAB40C-205ENST00000539661 PDGFBP01127 241 aaPredicted RBP14.91□□□□□ -0.02
RAB40C-205ENST00000539661 SSR4P51571 173 aa14.91□□□□□ -0.02
RAB40C-205ENST00000539661 OR5A2Q8NGI9 324 aa14.91□□□□□ -0.02
RAB40C-205ENST00000539661 ZCCHC14Q8WYQ9 949 aaKnown RBP14.91□□□□□ -0.02
RAB40C-205ENST00000539661 NCOR1O75376 2440 aa14.9□□□□□ -0.02
RAB40C-205ENST00000539661 B3GALT5-AS1P59052 145 aa14.9□□□□□ -0.02
RAB40C-205ENST00000539661 FAM78BQ5VT40 261 aa14.9□□□□□ -0.02
RAB40C-205ENST00000539661 OR8G2PQ6IF36 304 aa14.9□□□□□ -0.02
RAB40C-205ENST00000539661 MOB1BQ7L9L4 216 aa14.9□□□□□ -0.02
RAB40C-205ENST00000539661 CPEB3Q8NE35 698 aaKnown RBP14.9□□□□□ -0.02
RAB40C-205ENST00000539661 OR1K1Q8NGR3 316 aa14.9□□□□□ -0.02
RAB40C-205ENST00000539661 C20orf144Q9BQM9 153 aa14.9□□□□□ -0.02
RAB40C-205ENST00000539661 PRDM6Q9NQX0 595 aa14.9□□□□□ -0.02
RAB40C-205ENST00000539661 TNRC6AQ8NDV7 1962 aaKnown RBP14.9□□□□□ -0.02
RAB40C-205ENST00000539661 OR3A1P47881 315 aa14.9□□□□□ -0.02
RAB40C-205ENST00000539661 PRSS8Q16651 343 aa14.9□□□□□ -0.02
RAB40C-205ENST00000539661 WDR54Q9H977 334 aa14.9□□□□□ -0.02
RAB40C-205ENST00000539661 HSPB7Q9UBY9 170 aa14.9□□□□□ -0.02
RAB40C-205ENST00000539661 GOLT1BQ9Y3E0 138 aa14.9□□□□□ -0.02
RAB40C-205ENST00000539661 RNF212BA8MTL3 300 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 PDE6DO43924 150 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 PAGE4O60829 102 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 CLDN1O95832 211 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 SERPINA7P05543 415 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 LINC01551Q86U37 167 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 GATAD1Q8WUU5 269 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 TMEM208Q9BTX3 173 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 TRAV24A0A0B4J272 114 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 A0A0U1RQK1 487 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 ZNF320A2RRD8 509 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 LILRA1O75019 489 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 HPRT1P00492 218 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 LINC00614P0C842 121 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 SRD5A2P31213 254 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 FFAR4Q5NUL3 377 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 MRPL21Q7Z2W9 205 aaKnown RBP14.89□□□□□ -0.03
RAB40C-205ENST00000539661 GGNQ86UU5 652 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 CHODLQ9H9P2 273 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 OR1A1Q9P1Q5 309 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 PPP1R3CQ9UQK1 317 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 CBY1Q9Y3M2 126 aa14.89□□□□□ -0.03
RAB40C-205ENST00000539661 C11orf94C9JXX5 98 aa14.88□□□□□ -0.03
RAB40C-205ENST00000539661 HMGB3O15347 200 aaKnown RBP14.88□□□□□ -0.03
RAB40C-205ENST00000539661 CELA2AP08217 269 aa14.88□□□□□ -0.03
RAB40C-205ENST00000539661 CHRNA7P36544 502 aa14.88□□□□□ -0.03
RAB40C-205ENST00000539661 SOX8P57073 446 aa14.88□□□□□ -0.03
RAB40C-205ENST00000539661 RANP62826 216 aaKnown RBP14.88□□□□□ -0.03
RAB40C-205ENST00000539661 PAFAH1B2P68402 229 aa14.88□□□□□ -0.03
RAB40C-205ENST00000539661 TMEM249Q2WGJ8 235 aa14.88□□□□□ -0.03
RAB40C-205ENST00000539661 IMMP1LQ96LU5 166 aa14.88□□□□□ -0.03
RAB40C-205ENST00000539661 TBX15Q96SF7 602 aa14.88□□□□□ -0.03
RAB40C-205ENST00000539661 IGHV1-45A0A0A0MS14 117 aa14.88□□□□□ -0.03
RAB40C-205ENST00000539661 ZNF705FA8MVS1 300 aaPredicted RBP14.88□□□□□ -0.03
RAB40C-205ENST00000539661 G3V3Y1 287 aa14.88□□□□□ -0.03
RAB40C-205ENST00000539661 ZNF705DP0CH99 300 aaPredicted RBP14.88□□□□□ -0.03
RAB40C-205ENST00000539661 ZNF705BP0CI00 300 aaPredicted RBP14.88□□□□□ -0.03
RAB40C-205ENST00000539661 SRFP11831 508 aa14.88□□□□□ -0.03
RAB40C-205ENST00000539661 RPL29P47914 159 aaKnown RBP14.88□□□□□ -0.03
RAB40C-205ENST00000539661 CCL7P80098 99 aa14.88□□□□□ -0.03
RAB40C-205ENST00000539661 TMEM256Q8N2U0 113 aa14.88□□□□□ -0.03
RAB40C-205ENST00000539661 FGFRL1Q8N441 504 aa14.88□□□□□ -0.03
RAB40C-205ENST00000539661 IL1F10Q8WWZ1 152 aa14.88□□□□□ -0.03
RAB40C-205ENST00000539661 HS3ST1O14792 307 aa14.87□□□□□ -0.03
RAB40C-205ENST00000539661 SYNGR1O43759 233 aa14.87□□□□□ -0.03
RAB40C-205ENST00000539661 TNFSF13O75888 250 aa14.87□□□□□ -0.03
RAB40C-205ENST00000539661 YPEL3P61236 119 aaPredicted RBP14.87□□□□□ -0.03
RAB40C-205ENST00000539661 MSMO1Q15800 293 aa14.87□□□□□ -0.03
RAB40C-205ENST00000539661 RDH5Q92781 318 aa14.87□□□□□ -0.03
RAB40C-205ENST00000539661 MIEN1Q9BRT3 115 aa14.87□□□□□ -0.03
RAB40C-205ENST00000539661 PHF7Q9BWX1 381 aaPredicted RBP14.87□□□□□ -0.03
RAB40C-205ENST00000539661 TMEM106BQ9NUM4 274 aa14.87□□□□□ -0.03
RAB40C-205ENST00000539661 DLL3Q9NYJ7 618 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms