RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 CCNKO75909 580 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 CCNE2O96020 404 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 HLA-DRB1P01911 266 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 CRISP2P16562 243 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 CXCL5P42830 114 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 RAP1AP62834 184 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 MRPS21P82921 87 aaKnown RBP2.88□□□□□ -1.95
SKP1-209ENST00000522552 ELOCQ15369 112 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 MPPED2Q15777 294 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 TMEM241Q24JQ0 296 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 SMIM21Q3B7S5 101 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 HES3Q5TGS1 186 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 FA2HQ7L5A8 372 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 TCF23Q7RTU1 214 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 CAMK2N1Q7Z7J9 78 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 UMODL1-AS1Q8N2C9 162 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 FAM24BQ8N5W8 94 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 ANKRD29Q8N6D5 301 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 GDPD1Q8N9F7 314 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 FAM57AQ8TBR7 257 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 THTPAQ9BU02 230 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 FGF23Q9GZV9 251 aaPredicted RBP2.88□□□□□ -1.95
SKP1-209ENST00000522552 GTSF1LQ9H1H1 148 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 SND1-IT1Q9HBX3 110 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 PRTFDC1Q9NRG1 225 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 RASL12Q9NYN1 266 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 NEU3Q9UQ49 428 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 ZNFX1Q9P2E3 1918 aaKnown RBP2.88□□□□□ -1.95
SKP1-209ENST00000522552 ATRNO75882 1429 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 OR4C45A6NMZ5 311 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 LINC00587B1AMM8 73 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 B4DEV8 164 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 INS-IGF2F8WCM5 200 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 CDRT1O95170 752 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 CPMP14384 443 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 SPI1P17947 270 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 INPP1P49441 399 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 LINC00313P59037 77 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 GABARAPL2P60520 117 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 NCALDP61601 193 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 MPV17L2Q567V2 206 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 OR9A2Q8NGT5 310 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 ROPN1LQ96C74 230 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 KLF6Q99612 283 aaPredicted RBP2.88□□□□□ -1.95
SKP1-209ENST00000522552 OPRPNQ99935 248 aaPredicted RBP2.88□□□□□ -1.95
SKP1-209ENST00000522552 CCDC90BQ9GZT6 254 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 FAM96AQ9H5X1 160 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 ACER3Q9NUN7 267 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 SSR3Q9UNL2 185 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 FIS1Q9Y3D6 152 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 NOS1P29475 1434 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 DCCP43146 1447 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 POGZQ7Z3K3 1410 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 ROBO3Q96MS0 1386 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 ZNF98A6NK75 572 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 KRTAP16-1A8MUX0 517 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 MIF4GDA9UHW6 222 aaKnown RBP2.87□□□□□ -1.95
SKP1-209ENST00000522552 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.87□□□□□ -1.95
SKP1-209ENST00000522552 H7C1C5 153 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 M0R381 172 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 CST8O60676 142 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 ZNF354AO60765 605 aaPredicted RBP2.87□□□□□ -1.95
SKP1-209ENST00000522552 IGKV2-30P06310 120 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 CFC1BP0CG36 223 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 GPX2P18283 190 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 GABRR1P24046 479 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 CDK2P24941 298 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 NMUP48645 174 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 MEOX2P50222 304 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 ZNF136P52737 540 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 LCN6P62502 163 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 RPL36AP83881 106 aaKnown RBP2.87□□□□□ -1.95
SKP1-209ENST00000522552 FCN2Q15485 313 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 C12orf74Q32Q52 190 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 MRPL2Q5T653 305 aaKnown RBP2.87□□□□□ -1.95
SKP1-209ENST00000522552 EBLN2Q6P2I7 272 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 GUSBP11Q6P575 273 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 PDPNQ86YL7 162 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 ZNF525Q8N782 197 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 SLC25A29Q8N8R3 303 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 GALMQ96C23 342 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 REEP6Q96HR9 211 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 CNBD2Q96M20 576 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 FOPNLQ96NB1 174 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 TSPAN32Q96QS1 320 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 OR2M2Q96R28 347 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 CAMK2N2Q96S95 79 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 PBDC1Q9BVG4 233 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 DEFB126Q9BYW3 111 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 MED28Q9H204 178 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 CDC42EP4Q9H3Q1 356 aaKnown RBP2.87□□□□□ -1.95
SKP1-209ENST00000522552 SLC23A2Q9UGH3 650 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 TBX21Q9UL17 535 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 COQ4Q9Y3A0 265 aa2.87□□□□□ -1.95
SKP1-209ENST00000522552 ROCK2O75116 1388 aaKnown RBP2.87□□□□□ -1.95
SKP1-209ENST00000522552 CHD5Q8TDI0 1954 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 ERCC6Q03468 1493 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 A0A1B0GV90 55 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 C5orf63A6NC05 138 aa2.86□□□□□ -1.95
SKP1-209ENST00000522552 E7EQ34 232 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms