RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 ETV3LQ6ZN32 361 aa13.4□□□□□ -0.26
SQLE-205ENST00000521232 LINC00482Q8N8I6 264 aa13.4□□□□□ -0.26
SQLE-205ENST00000521232 RCC1LQ96I51 464 aaKnown RBP13.4□□□□□ -0.26
SQLE-205ENST00000521232 AGMATQ9BSE5 352 aa13.4□□□□□ -0.26
SQLE-205ENST00000521232 C12orf4Q9NQ89 552 aa13.4□□□□□ -0.26
SQLE-205ENST00000521232 ZNF580Q9UK33 172 aa13.4□□□□□ -0.26
SQLE-205ENST00000521232 RRP9O43818 475 aaKnown RBP13.39□□□□□ -0.27
SQLE-205ENST00000521232 DUS4LO95620 317 aaKnown RBP13.39□□□□□ -0.27
SQLE-205ENST00000521232 SCTP09683 121 aa13.39□□□□□ -0.27
SQLE-205ENST00000521232 ZBTB25P24278 435 aa13.39□□□□□ -0.27
SQLE-205ENST00000521232 CEACAM6P40199 344 aa13.39□□□□□ -0.27
SQLE-205ENST00000521232 THBS3P49746 956 aa13.39□□□□□ -0.27
SQLE-205ENST00000521232 HLA-DRB3P79483 266 aa13.39□□□□□ -0.27
SQLE-205ENST00000521232 CFHR3Q02985 330 aa13.39□□□□□ -0.27
SQLE-205ENST00000521232 PLA2G7Q13093 441 aa13.39□□□□□ -0.27
SQLE-205ENST00000521232 MMDQ15546 238 aa13.39□□□□□ -0.27
SQLE-205ENST00000521232 UBE2UQ5VVX9 321 aa13.39□□□□□ -0.27
SQLE-205ENST00000521232 C18orf65Q6ZTR6 163 aa13.39□□□□□ -0.27
SQLE-205ENST00000521232 MRPL41Q8IXM3 137 aaKnown RBP13.39□□□□□ -0.27
SQLE-205ENST00000521232 SPARTQ8N0X7 666 aa13.39□□□□□ -0.27
SQLE-205ENST00000521232 RNF152Q8N8N0 203 aa13.39□□□□□ -0.27
SQLE-205ENST00000521232 NPBQ8NG41 125 aa13.39□□□□□ -0.27
SQLE-205ENST00000521232 CMSS1Q9BQ75 279 aaKnown RBP13.39□□□□□ -0.27
SQLE-205ENST00000521232 YTHDF1Q9BYJ9 559 aaKnown RBP13.39□□□□□ -0.27
SQLE-205ENST00000521232 IFITM5A6NNB3 132 aa13.38□□□□□ -0.27
SQLE-205ENST00000521232 ELANEP08246 267 aa13.38□□□□□ -0.27
SQLE-205ENST00000521232 CT45A6P0DMU7 189 aa13.38□□□□□ -0.27
SQLE-205ENST00000521232 CT45A5P0DMU8 189 aa13.38□□□□□ -0.27
SQLE-205ENST00000521232 CT45A7P0DMV0 189 aa13.38□□□□□ -0.27
SQLE-205ENST00000521232 MYL9P24844 172 aa13.38□□□□□ -0.27
SQLE-205ENST00000521232 MYCNOSP40205 109 aa13.38□□□□□ -0.27
SQLE-205ENST00000521232 OR10A3P58181 314 aa13.38□□□□□ -0.27
SQLE-205ENST00000521232 FOXE3Q13461 319 aa13.38□□□□□ -0.27
SQLE-205ENST00000521232 C8orf86Q6ZUL3 223 aa13.38□□□□□ -0.27
SQLE-205ENST00000521232 ZNF695Q8IW36 515 aa13.38□□□□□ -0.27
SQLE-205ENST00000521232 EDARADDQ8WWZ3 215 aa13.38□□□□□ -0.27
SQLE-205ENST00000521232 PTX4Q96A99 478 aa13.38□□□□□ -0.27
SQLE-205ENST00000521232 CHCHD6Q9BRQ6 235 aa13.38□□□□□ -0.27
SQLE-205ENST00000521232 PARP12Q9H0J9 701 aaKnown RBP13.38□□□□□ -0.27
SQLE-205ENST00000521232 C11orf54Q9H0W9 315 aaPredicted RBP13.38□□□□□ -0.27
SQLE-205ENST00000521232 Q9H521 79 aa13.38□□□□□ -0.27
SQLE-205ENST00000521232 OR1A1Q9P1Q5 309 aa13.38□□□□□ -0.27
SQLE-205ENST00000521232 ZNF107Q9UII5 783 aaPredicted RBP13.38□□□□□ -0.27
SQLE-205ENST00000521232 KCNK7Q9Y2U2 307 aa13.38□□□□□ -0.27
SQLE-205ENST00000521232 TRDCB7Z8K6 153 aa13.37□□□□□ -0.27
SQLE-205ENST00000521232 NBR2O15453 112 aa13.37□□□□□ -0.27
SQLE-205ENST00000521232 NDUFA3O95167 84 aa13.37□□□□□ -0.27
SQLE-205ENST00000521232 IGHG4P01861 327 aa13.37□□□□□ -0.27
SQLE-205ENST00000521232 RPLP1P05386 114 aaKnown RBP13.37□□□□□ -0.27
SQLE-205ENST00000521232 SLC2A2P11168 524 aaPredicted RBP13.37□□□□□ -0.27
SQLE-205ENST00000521232 RAB3BP20337 219 aa13.37□□□□□ -0.27
SQLE-205ENST00000521232 CNTFRP26992 372 aa13.37□□□□□ -0.27
SQLE-205ENST00000521232 RPL39P5Q59GN2 51 aa13.37□□□□□ -0.27
SQLE-205ENST00000521232 KLHL30-AS1Q8NEE0 82 aa13.37□□□□□ -0.27
SQLE-205ENST00000521232 RAB3CQ96E17 227 aa13.37□□□□□ -0.27
SQLE-205ENST00000521232 ABHD14BQ96IU4 210 aa13.37□□□□□ -0.27
SQLE-205ENST00000521232 P2RX4Q99571 388 aa13.37□□□□□ -0.27
SQLE-205ENST00000521232 AURKAIP1Q9NWT8 199 aaPredicted RBP13.37□□□□□ -0.27
SQLE-205ENST00000521232 IGKV1-6A0A0C4DH72 117 aa13.36□□□□□ -0.27
SQLE-205ENST00000521232 NUDT19A8MXV4 375 aa13.36□□□□□ -0.27
SQLE-205ENST00000521232 HSPA12AO43301 675 aa13.36□□□□□ -0.27
SQLE-205ENST00000521232 PROP1O75360 226 aa13.36□□□□□ -0.27
SQLE-205ENST00000521232 HLA-DRB1P01911 266 aa13.36□□□□□ -0.27
SQLE-205ENST00000521232 OR5H8P0DN80 308 aa13.36□□□□□ -0.27
SQLE-205ENST00000521232 RAB6AP20340 208 aa13.36□□□□□ -0.27
SQLE-205ENST00000521232 VDAC1P21796 283 aa13.36□□□□□ -0.27
SQLE-205ENST00000521232 MC5RP33032 325 aa13.36□□□□□ -0.27
SQLE-205ENST00000521232 CDX1P47902 265 aaPredicted RBP13.36□□□□□ -0.27
SQLE-205ENST00000521232 C5orf64Q2M2E5 130 aa13.36□□□□□ -0.27
SQLE-205ENST00000521232 MOGAT2Q3SYC2 334 aa13.36□□□□□ -0.27
SQLE-205ENST00000521232 CXorf66Q5JRM2 361 aaPredicted RBP13.36□□□□□ -0.27
SQLE-205ENST00000521232 C22orf42Q6IC83 251 aa13.36□□□□□ -0.27
SQLE-205ENST00000521232 LIN54Q6MZP7 749 aa13.36□□□□□ -0.27
SQLE-205ENST00000521232 OR5AN1Q8NGI8 311 aa13.36□□□□□ -0.27
SQLE-205ENST00000521232 OR10R2Q8NGX6 335 aa13.36□□□□□ -0.27
SQLE-205ENST00000521232 KCTD7Q96MP8 289 aa13.36□□□□□ -0.27
SQLE-205ENST00000521232 TOLLIPQ9H0E2 274 aa13.36□□□□□ -0.27
SQLE-205ENST00000521232 IGHV7-81A0A0B4J1V7 117 aa13.35□□□□□ -0.27
SQLE-205ENST00000521232 OR5H14A6NHG9 310 aa13.35□□□□□ -0.27
SQLE-205ENST00000521232 H0YJW9 148 aa13.35□□□□□ -0.27
SQLE-205ENST00000521232 RAB27BO00194 218 aa13.35□□□□□ -0.27
SQLE-205ENST00000521232 PSMB8P28062 276 aa13.35□□□□□ -0.27
SQLE-205ENST00000521232 PPIFP30405 207 aaKnown RBP13.35□□□□□ -0.27
SQLE-205ENST00000521232 FGF9P31371 208 aaPredicted RBP13.35□□□□□ -0.27
SQLE-205ENST00000521232 FAM131AQ6UXB0 335 aa13.35□□□□□ -0.27
SQLE-205ENST00000521232 NR2C2APQ86WQ0 139 aa13.35□□□□□ -0.27
SQLE-205ENST00000521232 OR4A4PQ8NGN8 299 aa13.35□□□□□ -0.27
SQLE-205ENST00000521232 FCGR1BQ92637 280 aa13.35□□□□□ -0.27
SQLE-205ENST00000521232 OR51J1Q9H342 316 aa13.35□□□□□ -0.27
SQLE-205ENST00000521232 CD3GP09693 182 aa13.34□□□□□ -0.27
SQLE-205ENST00000521232 GADD45AP24522 165 aa13.34□□□□□ -0.27
SQLE-205ENST00000521232 PSMB9P28065 219 aa13.34□□□□□ -0.27
SQLE-205ENST00000521232 SERPINB10P48595 397 aa13.34□□□□□ -0.27
SQLE-205ENST00000521232 MRPS15P82914 257 aaKnown RBP13.34□□□□□ -0.27
SQLE-205ENST00000521232 KIR2DS1Q14954 304 aa13.34□□□□□ -0.27
SQLE-205ENST00000521232 GLDNQ6ZMI3 551 aaPredicted RBP13.34□□□□□ -0.27
SQLE-205ENST00000521232 LCNL1Q6ZST4 164 aa13.34□□□□□ -0.27
SQLE-205ENST00000521232 MRAPQ8TCY5 172 aa13.34□□□□□ -0.27
SQLE-205ENST00000521232 RAX2Q96IS3 184 aa13.34□□□□□ -0.27
SQLE-205ENST00000521232 RNF5Q99942 180 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms