RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 CLEC2DQ9UHP7 191 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 GLS2Q9UI32 602 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 NAGKQ9UJ70 344 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 ZNF580Q9UK33 172 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 RPH3ALQ9UNE2 315 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 SSR3Q9UNL2 185 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 EXOGQ9Y2C4 368 aaKnown RBP3.8□□□□□ -1.8
SDCBP-207ENST00000520168 LSM2Q9Y333 95 aaKnown RBP3.8□□□□□ -1.8
SDCBP-207ENST00000520168 VPS13DQ5THJ4 4388 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 A0A1W2PPV4 95 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 FAM90A18PA6NE21 464 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 FAM90A16PA6NEW6 464 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 FAM90A20PA6NIJ5 464 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 SH2D7A6NKC9 451 aaPredicted RBP3.79□□□□□ -1.8
SDCBP-207ENST00000520168 FAM90A9PA6NNJ1 464 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 FAM90A12PA8MX19 464 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 FAM90A5PA8MXJ8 464 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 ZNF732B4DXR9 585 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 J3QT63 122 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 OVOL1O14753 267 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 MYL12BO14950 172 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 ARPC1BO15143 372 aaKnown RBP3.79□□□□□ -1.8
SDCBP-207ENST00000520168 IFNGP01579 166 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 IGHG4P01861 327 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 FAM90A15PP0C7V4 464 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 FAM90A13PP0C7W8 464 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 FAM90A14PP0C7W9 464 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 FAM90A24PP0C7X0 464 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 HIST1H1CP16403 213 aaKnown RBP3.79□□□□□ -1.8
SDCBP-207ENST00000520168 SRMP19623 302 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 DTYMKP23919 212 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 CD24P25063 80 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 CNTFRP26992 372 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 CD34P28906 385 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 SLC6A6P31641 620 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 OPRL1P41146 370 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 RORCP51449 518 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 RIDAP52758 137 aaKnown RBP3.79□□□□□ -1.8
SDCBP-207ENST00000520168 WNT4P56705 351 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 LSM3P62310 102 aaKnown RBP3.79□□□□□ -1.8
SDCBP-207ENST00000520168 ZNF45Q02386 682 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 TPBGQ13641 420 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 MED22Q15528 200 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 SRSF7Q16629 238 aaKnown RBP eCLIP3.79□□□□□ -1.8
SDCBP-207ENST00000520168 HAGHQ16775 308 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 CT83Q5H943 113 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 DDI2Q5TDH0 399 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 PRSS45Q7RTY3 260 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 ABHD12Q8N2K0 398 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 IQCF1Q8N6M8 205 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 OR2T4Q8NH00 348 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 MCFD2Q8NI22 146 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 GRPEL2Q8TAA5 225 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 UFD1Q92890 307 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 MRPL48Q96GC5 212 aaKnown RBP3.79□□□□□ -1.8
SDCBP-207ENST00000520168 UBE2E2Q96LR5 201 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 SLIRPQ9GZT3 109 aaKnown RBP3.79□□□□□ -1.8
SDCBP-207ENST00000520168 NXF2Q9GZY0 626 aaKnown RBP3.79□□□□□ -1.8
SDCBP-207ENST00000520168 METTL9Q9H1A3 318 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 DCSTAMPQ9H295 470 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 EGLN3Q9H6Z9 239 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 HES4Q9HCC6 221 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 CMC2Q9NRP2 79 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 LIN7CQ9NUP9 197 aaKnown RBP3.79□□□□□ -1.8
SDCBP-207ENST00000520168 HSF4Q9ULV5 492 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 STUB1Q9UNE7 303 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 SLC22A13Q9Y226 551 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 GSTK1Q9Y2Q3 226 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 UBE2J1Q9Y385 318 aaPredicted RBP3.79□□□□□ -1.8
SDCBP-207ENST00000520168 AMMECR1Q9Y4X0 333 aaPredicted RBP3.79□□□□□ -1.8
SDCBP-207ENST00000520168 PEX16Q9Y5Y5 336 aa3.79□□□□□ -1.8
SDCBP-207ENST00000520168 TNCP24821 2201 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 ZNF729A6NN14 1252 aaPredicted RBP3.78□□□□□ -1.8
SDCBP-207ENST00000520168 RIIAD1A6NNX1 92 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 ZNF670-ZNF695F2Z2N8 137 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 LOC110117498-PIK3R3F6TDL0 507 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 BUB1B-PAK6H3BSN5 160 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 I3L521 148 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 M0R129 80 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 TOR1AO14656 332 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 SULT1C4O75897 302 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 FCER2P06734 321 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 CD3GP09693 182 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 CLEC2LP0C7M8 214 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 NQO2P16083 231 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 VDAC1P21796 283 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 ANOS1P23352 680 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 ACKR3P25106 362 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 S100PP25815 95 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 G0S2P27469 103 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 PSMB8P28062 276 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 ERP29P30040 261 aaKnown RBP3.78□□□□□ -1.8
SDCBP-207ENST00000520168 BDKRB2P30411 391 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 FGF9P31371 208 aaPredicted RBP3.78□□□□□ -1.8
SDCBP-207ENST00000520168 RAB7AP51149 207 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 ZNF121P58317 390 aaPredicted RBP3.78□□□□□ -1.8
SDCBP-207ENST00000520168 FXYD6P3P58550 94 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 TAS2R60P59551 318 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 NCS1P62166 190 aa3.78□□□□□ -1.8
SDCBP-207ENST00000520168 FLI1Q01543 452 aaPredicted RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms