RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 OR4X2Q8NGF9 303 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 ANKRD7Q92527 254 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 FRZBQ92765 325 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 MS4A6EQ96DS6 147 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 SNF8Q96H20 258 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 PITX2Q99697 317 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 AGMATQ9BSE5 352 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 ULBP2Q9BZM5 246 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 AICDAQ9GZX7 198 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 SYT4Q9H2B2 425 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 WDR55Q9H6Y2 383 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 NOX3Q9HBY0 568 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 MED4Q9NPJ6 270 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 TAAR3PQ9P1P4 343 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 CFL2Q9Y281 166 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 IGHV3OR16-9A0A0B4J2B5 98 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 KIR2DS1A0A191URI9 304 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 NCBP2LA6PVI3 153 aaKnown RBP3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 E5RI56 91 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 K7EMT4 169 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 NME4O00746 187 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 SYNGR1O43759 233 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 SMC2O95347 1197 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 YEATS4O95619 227 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 PTHP01270 115 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 IGKV3-15P01624 115 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 HLA-DPB1P04440 258 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 CCL2P13500 99 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 HTR1DP28221 377 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 NMUP48645 174 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 MNAT1P51948 309 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 DSCR10P59022 87 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 ATP6V0D1P61421 351 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 PPP1CBP62140 327 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 REEP5Q00765 189 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 GLO1Q04760 184 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 C2orf54Q08AI8 447 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 ST3GAL4Q11206 333 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 KIR2DS1Q14954 304 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 PSG3Q16557 428 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 TMEM183BQ1AE95 376 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 C18orf21Q32NC0 220 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 TMEM176BQ3YBM2 270 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 Q5VSD8 79 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 THOC7Q6I9Y2 204 aaKnown RBP3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 CEMP1Q6PRD7 247 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 AGTRAPQ6RW13 159 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 ACP7Q6ZNF0 438 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 ZNF621Q6ZSS3 439 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 LINC00173Q6ZV60 143 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 TMEM183AQ8IXX5 376 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 LINC00612Q8N6U2 182 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 ZNF645Q8N7E2 425 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 CLHC1Q8NHS4 586 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 PHYHIPLQ96FC7 376 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 CENPNQ96H22 339 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 TEAD3Q99594 435 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 TBL1YQ9BQ87 522 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 TRAPPC4Q9Y296 219 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 V9GYY9 64 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 DNAH17Q9UFH2 4485 aa3.22□□□□□ -1.89
HMGB1P23-201ENST00000518743 TANC2Q9HCD6 1990 aa3.21□□□□□ -1.89
HMGB1P23-201ENST00000518743 IGLV11-55A0A075B6I3 123 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 IGHV3-74A0A0B4J1X5 117 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 ENSAO43768 121 aaKnown RBP3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 SRSF10O75494 262 aaKnown RBP3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 UPK1BO75841 260 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 BRI3O95415 125 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 GPR75O95800 540 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 GNAO1P09471 354 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 HTR2CP28335 458 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 CDKN2BP42772 138 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 SSR2P43308 183 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 GPR4P46093 362 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 UBE2AP49459 152 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 ERFP50548 548 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 RAB7AP51149 207 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 RND2P52198 227 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 NCBP2P52298 156 aaKnown RBP eCLIP3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 OR2B8PP59922 312 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 PRR3P79522 188 aaKnown RBP3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 PDK2Q15119 407 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 C6orf183Q5T699 404 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 CPTPQ5TA50 214 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 HES5Q5TA89 166 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 ASCL4Q6XD76 172 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 MARCH3Q86UD3 253 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 ZNF567Q8N184 647 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 SYS1Q8N2H4 156 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 ZNF615Q8N8J6 731 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 OR7G1Q8NGA0 311 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 OR51G1Q8NGK1 321 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 NELFBQ8WX92 580 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 MRGPRFQ96AM1 343 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 TSNAXQ99598 290 aaKnown RBP3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 MAP1LC3CQ9BXW4 147 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 YTHDF1Q9BYJ9 559 aaKnown RBP3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 TBL1XR1Q9BZK7 514 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 TOLLIPQ9H0E2 274 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 GOLPH3Q9H4A6 298 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms