RNA–Protein interactions for RNA: ENST00000516381.1

SCARNA17.3-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 125 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.3-201ENST00000516381 MDH1P40925 334 aaKnown RBP-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 CRATP43155 626 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 GABRA2P47869 451 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 CAMLGP49069 296 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 TAS2R30P59541 319 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 RPL18AQ02543 176 aaKnown RBP-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 BNIP2Q12982 314 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 SELENBP1Q13228 472 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 RAB31Q13636 194 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 ZNF345Q14585 488 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 C4orf26Q17RF5 130 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 TRMT5Q32P41 509 aaKnown RBP-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 KRTAP6-2Q3LI66 62 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 PRAMEF5Q5TYX0 476 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 PRAMEF6Q5VXH4 476 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 EBLN2Q6P2I7 272 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 OR9G4Q8NGQ1 327 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 MITD1Q8WV92 249 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 NELFBQ8WX92 580 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 CCL17Q92583 94 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 CCDC47Q96A33 483 aaKnown RBP-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 TESCQ96BS2 214 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 LRRC39Q96DD0 335 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 ERP27Q96DN0 273 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 TMA16Q96EY4 203 aaKnown RBP-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 FMC1Q96HJ9 113 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 ZNF396Q96N95 335 aaPredicted RBP-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 AGMATQ9BSE5 352 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 ROPN1BQ9BZX4 212 aaPredicted RBP-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 MAF1Q9H063 256 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 SPACA1Q9HBV2 294 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 CD209Q9NNX6 404 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 TMEM14CQ9P0S9 112 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 ACTR3BQ9P1U1 418 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 FIS1Q9Y3D6 152 aa-1.12□□□□□ -2.59
SCARNA17.3-201ENST00000516381 SPG11Q96JI7 2443 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 MAP3K19Q56UN5 1328 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 NRCAMQ92823 1304 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 TRAV8-3A0A0A6YYJ7 113 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 TRBV9A0A0B4J1U6 114 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 IGHV2-26A0A0B4J1V2 119 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 IGHV2OR16-5A0A0B4J2B6 119 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 ODAMA1E959 279 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 TLCD2A6NGC4 264 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 TMEM250H0YL14 139 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 H3BP45 60 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 K7EQM0 130 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 EIF3HO15372 352 aaKnown RBP eCLIP-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 OR1I1O60431 355 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 SNNO75324 88 aaPredicted RBP-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 LY6G6CO95867 125 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 CD160O95971 181 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 CA2P00918 260 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 CATP04040 527 aaKnown RBP-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 LGALS1P09382 135 aaKnown RBP-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 CLTAP09496 248 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 HLA-DPA1P20036 260 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 SPRR2EP22531 72 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 ACAA2P42765 397 aaKnown RBP-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 HIST1H4AP62805 103 aaKnown RBP-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 BST2Q10589 180 aaKnown RBP-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 PDE6HQ13956 83 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 FAM27BQ5VT28 67 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 TTC23LQ6PF05 361 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 TEX261Q6UWH6 196 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 FAM19A3Q7Z5A8 133 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 C10orf67Q8IYJ2 551 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 LRRC75A-AS1Q8N1F1 130 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 OR10Z1Q8NGY1 313 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 CCDC110Q8TBZ0 833 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 RPS4Y2Q8TD47 263 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 RLN3Q8WXF3 142 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 ITFG2Q969R8 447 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 OR2M4Q96R27 311 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 IMMP2LQ96T52 175 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 EBNA1BP2Q99848 306 aaKnown RBP-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 SHCBP1LQ9BZQ2 653 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 ZYG11BQ9C0D3 744 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 IMUPQ9GZP8 106 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 COMMD5Q9GZQ3 224 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 NXF2Q9GZY0 626 aaKnown RBP-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 C11orf49Q9H6J7 331 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 TMEM165Q9HC07 324 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 DNAJC27Q9NZQ0 273 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 PSMC3IPQ9P2W1 217 aaPredicted RBP-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 CFAP45Q9UL16 551 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 PIN4Q9Y237 131 aaKnown RBP-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 POMPQ9Y244 141 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 RBM7Q9Y580 266 aaKnown RBP-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 U3KQ87 197 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 ABCA1O95477 2261 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 LAMC3Q9Y6N6 1575 aa-1.13□□□□□ -2.59
SCARNA17.3-201ENST00000516381 MGAMO43451 1857 aa-1.14□□□□□ -2.59
SCARNA17.3-201ENST00000516381 COL12A1Q99715 3063 aa-1.14□□□□□ -2.59
SCARNA17.3-201ENST00000516381 CHD5Q8TDI0 1954 aa-1.14□□□□□ -2.59
SCARNA17.3-201ENST00000516381 URB1O60287 2271 aaKnown RBP-1.14□□□□□ -2.59
SCARNA17.3-201ENST00000516381 TRAV25A0A0B4J276 109 aa-1.14□□□□□ -2.59
SCARNA17.3-201ENST00000516381 RNF103-CHMP3A0A140T963 221 aa-1.14□□□□□ -2.59
SCARNA17.3-201ENST00000516381 A0A1B0GXF2 115 aa-1.14□□□□□ -2.59
SCARNA17.3-201ENST00000516381 FUOMA2VDF0 154 aa-1.14□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms