RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 RARRES3Q9UL19 164 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 PI4KAP42356 2102 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 TRBV20OR9-2A0A075B6H5 130 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 TRAV36DV7A0A075B6V5 113 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 A0A087X0K7 114 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 IGHV3-15A0A0B4J1V0 119 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 DUXBA0A1W2PPF3 345 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 A0A1W2PQU0 124 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 MT-CO3P00414 261 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 ISG15P05161 165 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 GP1BBP13224 206 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 KITLGP21583 273 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 ACSF3Q4G176 576 aaPredicted RBP6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 MRGPRGQ86SM5 289 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 OR8I2Q8N0Y5 310 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 NHLRC2Q8NBF2 726 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 ZNF439Q8NDP4 499 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 SIGLEC12Q96PQ1 595 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 CLEC7AQ9BXN2 247 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 GSX1Q9H4S2 264 aaPredicted RBP6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 PRTFDC1Q9NRG1 225 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 CACNG5Q9UF02 275 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 NAT8BQ9UHF3 227 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 SLC45A2Q9UMX9 530 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 ATMQ13315 3056 aa6.2□□□□□ -1.42
LIMCH1-207ENST00000508466 A0A1W2PN81 502 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 OR6C6A6NF89 314 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 PPYP01298 95 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 ACRP10323 421 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 PSG2P11465 335 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 IGLL1P15814 213 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 DRD3P35462 400 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 NPBWR2P48146 333 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 GNB1P62873 340 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 TFF3Q07654 80 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 NIT1Q86X76 327 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 ARHGEF39Q8N4T4 335 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 KREMEN2Q8NCW0 462 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 OR2V1Q8NHB1 315 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 OR1E3Q8WZA6 343 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 GPR146Q96CH1 333 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 HDAC8Q9BY41 377 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 ELOVL5Q9NYP7 299 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 PSENENQ9NZ42 101 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 SCN10AQ9Y5Y9 1956 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 GPX1P07203 203 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 CFPP27918 469 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 CA7P43166 264 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 RABIFP47224 123 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 EDDM3BP56851 147 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 DPTQ07507 201 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 HNRNPA1L2Q32P51 320 aaKnown RBP6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 TMEM92Q6UXU6 159 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 SPATA12Q7Z6I5 190 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 ZNF295-AS1Q8N0V1 137 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 OR52L2PQ8NGH6 319 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 OR10G4Q8NGN3 311 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 OR10G9Q8NGN4 311 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 OR10G7Q8NGN6 311 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 OCC1Q8TAD7 63 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 THRSPQ92748 146 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 CHRDL1Q9BU40 450 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 ZBP1Q9H171 429 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 SLC35D1Q9NTN3 355 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 RELNP78509 3460 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 IGKV1-27A0A075B6S5 117 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 A0A1W2PS18 150 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 PPIAL4DF5H284 164 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 K7EMI3 77 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 RBMXL2O75526 392 aaKnown RBP6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 CLDN1O95832 211 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 SMIM10L1P0DMW3 83 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 ADH5P11766 374 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 SRIP30626 198 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 RPL24P83731 157 aaKnown RBP6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 PSG9Q00887 426 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 MYBPHQ13203 477 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 SGCBQ16585 318 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 TGIF2LYQ8IUE0 185 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 TCEAL8Q8IYN2 117 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 ADIPOR1Q96A54 375 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 PLPPR2Q96GM1 343 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 SMIM10Q96HG1 83 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 GMPPAQ96IJ6 420 aaPredicted RBP6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 TMEM222Q9H0R3 208 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 PHPT1Q9NRX4 125 aaPredicted RBP6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 SERTAD4Q9NUC0 356 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 ST3GAL6Q9Y274 331 aa6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 CHTOPQ9Y3Y2 248 aaKnown RBP6.19□□□□□ -1.42
LIMCH1-207ENST00000508466 COL4A6Q14031 1691 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 LOC102725191A0A1B0GVB3 256 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 HSBP1L1C9JCN9 74 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 KALRNO60229 2985 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 CA3P07451 260 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 CYBAP13498 195 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 EMC4Q5J8M3 183 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 SP5Q6BEB4 398 aaPredicted RBP6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 LINC00173Q6ZV60 143 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 TMEM116Q8NCL8 245 aa6.18□□□□□ -1.42
LIMCH1-207ENST00000508466 HOXB13Q92826 284 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms