RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 WNT5AP41221 380 aa14.27□□□□□ -0.12
PCDHA1-203ENST00000504120 TXNDC17Q9BRA2 123 aa14.27□□□□□ -0.12
PCDHA1-203ENST00000504120 PIN1P1O15428 100 aa14.27□□□□□ -0.13
PCDHA1-203ENST00000504120 MELTFP08582 738 aa14.27□□□□□ -0.13
PCDHA1-203ENST00000504120 RPL27AP46776 148 aaKnown RBP14.27□□□□□ -0.13
PCDHA1-203ENST00000504120 P2RY4P51582 365 aa14.27□□□□□ -0.13
PCDHA1-203ENST00000504120 C16orf82Q7Z2V1 217 aa14.27□□□□□ -0.13
PCDHA1-203ENST00000504120 MS4A7Q9GZW8 240 aaPredicted RBP14.27□□□□□ -0.13
PCDHA1-203ENST00000504120 PXMP4Q9Y6I8 212 aa14.27□□□□□ -0.13
PCDHA1-203ENST00000504120 COX6A1P12074 109 aa14.27□□□□□ -0.13
PCDHA1-203ENST00000504120 HERVK_113P61574 105 aa14.27□□□□□ -0.13
PCDHA1-203ENST00000504120 RUNX1Q01196 453 aa14.27□□□□□ -0.13
PCDHA1-203ENST00000504120 LRRC75AQ8NAA5 344 aa14.27□□□□□ -0.13
PCDHA1-203ENST00000504120 OR8G5Q8NG78 346 aa14.27□□□□□ -0.13
PCDHA1-203ENST00000504120 MS4A3Q96HJ5 214 aa14.27□□□□□ -0.13
PCDHA1-203ENST00000504120 PRDM14Q9GZV8 571 aa14.27□□□□□ -0.13
PCDHA1-203ENST00000504120 NPDC1Q9NQX5 325 aaPredicted RBP14.27□□□□□ -0.13
PCDHA1-203ENST00000504120 NPIPB13A6NJU9 1138 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 NPIPB4C9JG80 1138 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 LMX1BO60663 402 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 OR2D3Q8NGH3 330 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 HSPB8Q9UJY1 196 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 ZDHHC8Q9ULC8 765 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 BRCA1P38398 1863 aaKnown RBP14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 IFNL4K9M1U5 179 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 CORTO00230 105 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 HIST1H1BP16401 226 aaKnown RBP14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 PPOXP50336 477 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 CD81P60033 236 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 STARD4Q96DR4 205 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 MYO16Q9Y6X6 1858 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 NMBP08949 121 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 APELAP0DMC3 54 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 UBE2V2Q15819 145 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 ECSCRQ19T08 205 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 ZXDCQ2QGD7 858 aaPredicted RBP14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 TUSC1Q2TAM9 212 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 OVCH2Q7RTZ1 564 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 G6PC2Q9NQR9 355 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 PGLYRP1O75594 196 aaPredicted RBP14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 OR10J1P30954 320 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 FAM3BP58499 235 aaPredicted RBP14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 SELENOTP62341 195 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 KCNMB1Q16558 191 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 SNAI3Q3KNW1 292 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 CALHM1Q8IU99 346 aa14.26□□□□□ -0.13
PCDHA1-203ENST00000504120 NKX2-8O15522 239 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 KCNAB3O43448 404 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 MUC1P15941 1255 aaPredicted RBP14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 DHRS11Q6UWP2 260 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 WDFY1Q8IWB7 410 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 GBGT1Q8N5D6 347 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 ITLN1Q8WWA0 313 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 P2RX4Q99571 388 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 COLQQ9Y215 455 aaPredicted RBP14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 SCN3AQ9NY46 2000 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 ADRA2AP08913 450 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 RPL7P18124 248 aaKnown RBP14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 LINC01590Q5TEZ4 76 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 CHRNA10Q9GZZ6 450 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 NINQ8N4C6 2090 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 ARID1AO14497 2285 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 A0A087X0M5 115 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 A0A1B0GX30 115 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 CEACAM18A8MTB9 384 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 ZNF660Q6AZW8 331 aaPredicted RBP14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 PET117Q6UWS5 81 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 CYB561D1Q8N8Q1 229 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 LHFPL5Q8TAF8 219 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 MIA3Q5JRA6 1907 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 FAM90A26D6RGX4 464 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 PCOLCEQ15113 449 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 FAM181AQ8N9Y4 354 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 PCGF1Q9BSM1 259 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 DLL3Q9NYJ7 618 aa14.25□□□□□ -0.13
PCDHA1-203ENST00000504120 PAFAH1B2P68402 229 aa14.24□□□□□ -0.13
PCDHA1-203ENST00000504120 ID1P41134 155 aa14.24□□□□□ -0.13
PCDHA1-203ENST00000504120 SHISA5Q8N114 240 aa14.24□□□□□ -0.13
PCDHA1-203ENST00000504120 AQP10Q96PS8 301 aa14.24□□□□□ -0.13
PCDHA1-203ENST00000504120 NDUFA2O43678 99 aa14.24□□□□□ -0.13
PCDHA1-203ENST00000504120 CYB5R3P00387 301 aaPredicted RBP14.24□□□□□ -0.13
PCDHA1-203ENST00000504120 HSPB1P04792 205 aaKnown RBP14.24□□□□□ -0.13
PCDHA1-203ENST00000504120 RHOVQ96L33 236 aa14.24□□□□□ -0.13
PCDHA1-203ENST00000504120 Q96M66 194 aa14.24□□□□□ -0.13
PCDHA1-203ENST00000504120 SLC25A33Q9BSK2 321 aa14.24□□□□□ -0.13
PCDHA1-203ENST00000504120 SCNM1Q9BWG6 230 aa14.24□□□□□ -0.13
PCDHA1-203ENST00000504120 RBKSQ9H477 322 aa14.24□□□□□ -0.13
PCDHA1-203ENST00000504120 SPAG17Q6Q759 2223 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 EPOPA6NHQ4 379 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 IGKV3-11P04433 115 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 HKR1P10072 659 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 CTSSP25774 331 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 CD40P25942 277 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 LRRC75BQ2VPJ9 315 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 RSG1Q9BU20 258 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 ZFC3H1O60293 1989 aaKnown RBP14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 PSME4Q14997 1843 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 A0A1W2PQM1 296 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 A0A1W2PR77 199 aa14.23□□□□□ -0.13
PCDHA1-203ENST00000504120 M0QZK8 103 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms