RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 FLVCR2Q9UPI3 526 aa15.77■□□□□ 0.12
USP39-218ENST00000493829 TRAV6A0A075B6T7 132 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 J3QLI3 93 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 IGHV4-38-2P0DP08 117 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 PHLDA2Q53GA4 152 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 PLA1AQ53H76 456 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 RPL39P5Q59GN2 51 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 C1orf229Q6ZS94 237 aaPredicted RBP15.76■□□□□ 0.11
USP39-218ENST00000493829 TMED4Q7Z7H5 227 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 UPRTQ96BW1 309 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 C5orf30Q96GV9 206 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 MMP28Q9H239 520 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 VSIG4Q9Y279 399 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 SAA2-SAA4A0A096LPE2 208 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 CENPVL3A0A0U1RRI6 287 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 ARPC1BO15143 372 aaKnown RBP15.76■□□□□ 0.11
USP39-218ENST00000493829 TNFSF12O43508 249 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 NDUFB6O95139 128 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 RLN1P04808 185 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 SAA2P0DJI9 122 aaPredicted RBP15.76■□□□□ 0.11
USP39-218ENST00000493829 RAB7AP51149 207 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 PRRX1P54821 245 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 HLA-DRB5Q30154 266 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 BRD3OSQ6XYD6 125 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 SPNS3Q6ZMD2 512 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 ZNF818PQ6ZRF7 136 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 OR11H6Q8NGC7 330 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 OR4P4Q8NGL7 312 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 AGMATQ9BSE5 352 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 C20orf85Q9H1P6 137 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 YAE1D1Q9NRH1 226 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 NUDT15Q9NV35 164 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 ZNF221Q9UK13 617 aa15.76■□□□□ 0.11
USP39-218ENST00000493829 CD5LO43866 347 aa15.75■□□□□ 0.11
USP39-218ENST00000493829 PTTG1O95997 202 aa15.75■□□□□ 0.11
USP39-218ENST00000493829 IGLV1-47P01700 117 aa15.75■□□□□ 0.11
USP39-218ENST00000493829 TCRBP04435 133 aa15.75■□□□□ 0.11
USP39-218ENST00000493829 PAX6P26367 422 aa15.75■□□□□ 0.11
USP39-218ENST00000493829 REG1BP48304 166 aa15.75■□□□□ 0.11
USP39-218ENST00000493829 RAB25P57735 213 aa15.75■□□□□ 0.11
USP39-218ENST00000493829 ZNF626Q68DY1 528 aa15.75■□□□□ 0.11
USP39-218ENST00000493829 IL17RELQ6ZVW7 336 aa15.75■□□□□ 0.11
USP39-218ENST00000493829 LHFPL4Q7Z7J7 247 aa15.75■□□□□ 0.11
USP39-218ENST00000493829 ZNF645Q8N7E2 425 aa15.75■□□□□ 0.11
USP39-218ENST00000493829 ZNF596Q8TC21 504 aa15.75■□□□□ 0.11
USP39-218ENST00000493829 ABCA1O95477 2261 aa15.74■□□□□ 0.11
USP39-218ENST00000493829 ODF3BA8MYP8 253 aa15.74■□□□□ 0.11
USP39-218ENST00000493829 GNRHRP30968 328 aa15.74■□□□□ 0.11
USP39-218ENST00000493829 DIAPH2-AS1Q14236 149 aa15.74■□□□□ 0.11
USP39-218ENST00000493829 LY6G6FQ5SQ64 297 aa15.74■□□□□ 0.11
USP39-218ENST00000493829 GPR157Q5UAW9 335 aa15.74■□□□□ 0.11
USP39-218ENST00000493829 ODF3L1Q8IXM7 274 aa15.74■□□□□ 0.11
USP39-218ENST00000493829 SLC38A6Q8IZM9 456 aa15.74■□□□□ 0.11
USP39-218ENST00000493829 DRAM1Q8N682 238 aa15.74■□□□□ 0.11
USP39-218ENST00000493829 BEND2Q8NDZ0 799 aa15.74■□□□□ 0.11
USP39-218ENST00000493829 BEX2Q9BXY8 128 aa15.74■□□□□ 0.11
USP39-218ENST00000493829 BEX1Q9HBH7 125 aa15.74■□□□□ 0.11
USP39-218ENST00000493829 SDHAF2Q9NX18 166 aa15.74■□□□□ 0.11
USP39-218ENST00000493829 IGLV2-14P01704 120 aa15.73■□□□□ 0.11
USP39-218ENST00000493829 CD99P14209 185 aa15.73■□□□□ 0.11
USP39-218ENST00000493829 UBE2E1P51965 193 aa15.73■□□□□ 0.11
USP39-218ENST00000493829 ABCA11PQ4W5N1 156 aa15.73■□□□□ 0.11
USP39-218ENST00000493829 KLF17Q5JT82 389 aaPredicted RBP15.73■□□□□ 0.11
USP39-218ENST00000493829 LDLRAD2Q5SZI1 272 aa15.73■□□□□ 0.11
USP39-218ENST00000493829 C8orf31Q8N9H6 132 aa15.73■□□□□ 0.11
USP39-218ENST00000493829 DRAXINQ8NBI3 349 aaPredicted RBP15.73■□□□□ 0.11
USP39-218ENST00000493829 ADAD2Q8NCV1 583 aaKnown RBP15.73■□□□□ 0.11
USP39-218ENST00000493829 C17orf50Q8WW18 174 aa15.73■□□□□ 0.11
USP39-218ENST00000493829 SLC25A21Q9BQT8 299 aaPredicted RBP15.73■□□□□ 0.11
USP39-218ENST00000493829 C14orf166Q9Y224 244 aaKnown RBP15.73■□□□□ 0.11
USP39-218ENST00000493829 ACANP16112 2415 aa15.73■□□□□ 0.11
USP39-218ENST00000493829 IGHV1-69DA0A0B4J2H0 117 aa15.73■□□□□ 0.11
USP39-218ENST00000493829 BUB1B-PAK6H3BSN5 160 aa15.73■□□□□ 0.11
USP39-218ENST00000493829 M0R1X1 148 aa15.73■□□□□ 0.11
USP39-218ENST00000493829 ITGB1BP1O14713 200 aa15.73■□□□□ 0.11
USP39-218ENST00000493829 RAB29O14966 203 aa15.73■□□□□ 0.11
USP39-218ENST00000493829 NPFFO15130 113 aa15.73■□□□□ 0.11
USP39-218ENST00000493829 IGHV1-69P01742 117 aa15.73■□□□□ 0.11
USP39-218ENST00000493829 SAA4P35542 130 aa15.73■□□□□ 0.11
USP39-218ENST00000493829 LGALS4P56470 323 aa15.73■□□□□ 0.11
USP39-218ENST00000493829 LINC00311Q8N616 119 aa15.73■□□□□ 0.11
USP39-218ENST00000493829 RSRP1Q9BUV0 290 aa15.73■□□□□ 0.11
USP39-218ENST00000493829 C5orf66Q9H5L9 145 aa15.73■□□□□ 0.11
USP39-218ENST00000493829 AMMECR1Q9Y4X0 333 aaPredicted RBP15.73■□□□□ 0.11
USP39-218ENST00000493829 ANXA7P20073 488 aaKnown RBP15.72■□□□□ 0.11
USP39-218ENST00000493829 IL3RAP26951 378 aa15.72■□□□□ 0.11
USP39-218ENST00000493829 ECI1P42126 302 aa15.72■□□□□ 0.11
USP39-218ENST00000493829 UCP3P55916 312 aa15.72■□□□□ 0.11
USP39-218ENST00000493829 LINC00205P59089 165 aa15.72■□□□□ 0.11
USP39-218ENST00000493829 TRIM16LQ309B1 348 aa15.72■□□□□ 0.11
USP39-218ENST00000493829 PLET1Q6UQ28 207 aa15.72■□□□□ 0.11
USP39-218ENST00000493829 PIP4P2Q8N4L2 257 aa15.72■□□□□ 0.11
USP39-218ENST00000493829 ZFAND1Q8TCF1 268 aa15.72■□□□□ 0.11
USP39-218ENST00000493829 RBMXL1Q96E39 390 aaKnown RBP15.72■□□□□ 0.11
USP39-218ENST00000493829 RTBDNQ9BSG5 229 aaPredicted RBP15.72■□□□□ 0.11
USP39-218ENST00000493829 SLC2A9Q9NRM0 540 aa15.72■□□□□ 0.11
USP39-218ENST00000493829 PIPOXQ9P0Z9 390 aa15.72■□□□□ 0.11
USP39-218ENST00000493829 GPR132Q9UNW8 380 aa15.72■□□□□ 0.11
USP39-218ENST00000493829 HILPDAQ9Y5L2 63 aa15.72■□□□□ 0.11
USP39-218ENST00000493829 NUBP2Q9Y5Y2 271 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms