RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 LPAR5Q9H1C0 372 aa12.23□□□□□ -0.45
SRRT-209ENST00000474896 PLSCR3Q9NRY6 295 aa12.23□□□□□ -0.45
SRRT-209ENST00000474896 NDUFA13Q9P0J0 144 aa12.23□□□□□ -0.45
SRRT-209ENST00000474896 ZNF581Q9P0T4 197 aa12.23□□□□□ -0.45
SRRT-209ENST00000474896 ZNF701M0R085 212 aaPredicted RBP12.22□□□□□ -0.45
SRRT-209ENST00000474896 RORCP51449 518 aa12.22□□□□□ -0.45
SRRT-209ENST00000474896 SCAND1P57086 179 aa12.22□□□□□ -0.45
SRRT-209ENST00000474896 IZUMO1Q8IYV9 350 aa12.22□□□□□ -0.45
SRRT-209ENST00000474896 RNF152Q8N8N0 203 aa12.22□□□□□ -0.45
SRRT-209ENST00000474896 DYNC2LI1Q8TCX1 351 aa12.22□□□□□ -0.45
SRRT-209ENST00000474896 S1PR3Q99500 378 aa12.22□□□□□ -0.45
SRRT-209ENST00000474896 NICN1Q9BSH3 213 aa12.22□□□□□ -0.45
SRRT-209ENST00000474896 URM1Q9BTM9 101 aaKnown RBP12.22□□□□□ -0.45
SRRT-209ENST00000474896 IFT22Q9H7X7 185 aa12.22□□□□□ -0.45
SRRT-209ENST00000474896 ABRACLQ9P1F3 81 aa12.22□□□□□ -0.45
SRRT-209ENST00000474896 RAB22AQ9UL26 194 aa12.22□□□□□ -0.45
SRRT-209ENST00000474896 ETV7Q9Y603 341 aa12.22□□□□□ -0.45
SRRT-209ENST00000474896 A0A0A6YYD4 124 aa12.21□□□□□ -0.45
SRRT-209ENST00000474896 FAM90A10PA6NDY2 464 aa12.21□□□□□ -0.45
SRRT-209ENST00000474896 FAM90A7PA6NKC0 464 aa12.21□□□□□ -0.45
SRRT-209ENST00000474896 FAM90A23PA8MXZ1 464 aa12.21□□□□□ -0.45
SRRT-209ENST00000474896 ZNF736B4DX44 427 aaPredicted RBP12.21□□□□□ -0.45
SRRT-209ENST00000474896 MOSP00540 346 aa12.21□□□□□ -0.45
SRRT-209ENST00000474896 RAB6AP20340 208 aa12.21□□□□□ -0.45
SRRT-209ENST00000474896 CD1BP29016 333 aa12.21□□□□□ -0.45
SRRT-209ENST00000474896 ZNF260Q3ZCT1 412 aa12.21□□□□□ -0.45
SRRT-209ENST00000474896 FAM53AQ6NSI3 398 aaPredicted RBP12.21□□□□□ -0.45
SRRT-209ENST00000474896 LINC00311Q8N616 119 aa12.21□□□□□ -0.45
SRRT-209ENST00000474896 OR5H6Q8NGV6 325 aa12.21□□□□□ -0.45
SRRT-209ENST00000474896 UBALD1Q8TB05 177 aa12.21□□□□□ -0.45
SRRT-209ENST00000474896 CCDC107Q8WV48 283 aa12.21□□□□□ -0.45
SRRT-209ENST00000474896 ARL11Q969Q4 196 aa12.21□□□□□ -0.45
SRRT-209ENST00000474896 PTX4Q96A99 478 aa12.21□□□□□ -0.45
SRRT-209ENST00000474896 KCTD12Q96CX2 325 aaKnown RBP12.21□□□□□ -0.45
SRRT-209ENST00000474896 RBMXL1Q96E39 390 aaKnown RBP12.21□□□□□ -0.45
SRRT-209ENST00000474896 RCC2Q9P258 522 aaKnown RBP12.21□□□□□ -0.45
SRRT-209ENST00000474896 C15orf65H3BRN8 121 aa12.2□□□□□ -0.46
SRRT-209ENST00000474896 SDCBPO00560 298 aaPredicted RBP12.2□□□□□ -0.46
SRRT-209ENST00000474896 IGHG4P01861 327 aa12.2□□□□□ -0.46
SRRT-209ENST00000474896 ZNF182P17025 639 aaPredicted RBP12.2□□□□□ -0.46
SRRT-209ENST00000474896 F2RL1P55085 397 aa12.2□□□□□ -0.46
SRRT-209ENST00000474896 ATAD3CQ5T2N8 411 aa12.2□□□□□ -0.46
SRRT-209ENST00000474896 SIGIRRQ6IA17 410 aa12.2□□□□□ -0.46
SRRT-209ENST00000474896 FAM89BQ8N5H3 189 aa12.2□□□□□ -0.46
SRRT-209ENST00000474896 OR11H1Q8NG94 326 aa12.2□□□□□ -0.46
SRRT-209ENST00000474896 OR52M1Q8NGK5 317 aa12.2□□□□□ -0.46
SRRT-209ENST00000474896 C4orf3Q8WVX3 66 aa12.2□□□□□ -0.46
SRRT-209ENST00000474896 RTN4IP1Q8WWV3 396 aaPredicted RBP12.2□□□□□ -0.46
SRRT-209ENST00000474896 ST6GALNAC6Q969X2 333 aa12.2□□□□□ -0.46
SRRT-209ENST00000474896 HSPB9Q9BQS6 159 aa12.2□□□□□ -0.46
SRRT-209ENST00000474896 SPACA1Q9HBV2 294 aa12.2□□□□□ -0.46
SRRT-209ENST00000474896 SPATA2Q9UM82 520 aa12.2□□□□□ -0.46
SRRT-209ENST00000474896 ZNF256Q9Y2P7 627 aaPredicted RBP12.2□□□□□ -0.46
SRRT-209ENST00000474896 IGHV3-43A0A0B4J1X8 118 aa12.19□□□□□ -0.46
SRRT-209ENST00000474896 TMEM30CPA0ZSE6 113 aa12.19□□□□□ -0.46
SRRT-209ENST00000474896 PDCD6O75340 191 aa12.19□□□□□ -0.46
SRRT-209ENST00000474896 IGHV3-43DP0DP04 118 aa12.19□□□□□ -0.46
SRRT-209ENST00000474896 VDAC1P21796 283 aa12.19□□□□□ -0.46
SRRT-209ENST00000474896 CHATP28329 748 aa12.19□□□□□ -0.46
SRRT-209ENST00000474896 SOX6P35712 828 aa12.19□□□□□ -0.46
SRRT-209ENST00000474896 VEGFCP49767 419 aa12.19□□□□□ -0.46
SRRT-209ENST00000474896 CFHR3Q02985 330 aa12.19□□□□□ -0.46
SRRT-209ENST00000474896 RAB12Q6IQ22 244 aa12.19□□□□□ -0.46
SRRT-209ENST00000474896 C8orf31Q8N9H6 132 aa12.19□□□□□ -0.46
SRRT-209ENST00000474896 ACOT12Q8WYK0 555 aa12.19□□□□□ -0.46
SRRT-209ENST00000474896 AP3S1Q92572 193 aa12.19□□□□□ -0.46
SRRT-209ENST00000474896 DGCR14Q96DF8 476 aaKnown RBP12.19□□□□□ -0.46
SRRT-209ENST00000474896 SLC25A38Q96DW6 304 aa12.19□□□□□ -0.46
SRRT-209ENST00000474896 RHBDL2Q9NX52 303 aa12.19□□□□□ -0.46
SRRT-209ENST00000474896 GFOD1Q9NXC2 390 aa12.19□□□□□ -0.46
SRRT-209ENST00000474896 CCDC59Q9P031 241 aaKnown RBP12.19□□□□□ -0.46
SRRT-209ENST00000474896 SORL1Q92673 2214 aa12.19□□□□□ -0.46
SRRT-209ENST00000474896 METTL21EPA6NDL7 271 aa12.18□□□□□ -0.46
SRRT-209ENST00000474896 A6NHS1 94 aa12.18□□□□□ -0.46
SRRT-209ENST00000474896 FOXI3A8MTJ6 420 aaPredicted RBP12.18□□□□□ -0.46
SRRT-209ENST00000474896 SOCS1O15524 211 aa12.18□□□□□ -0.46
SRRT-209ENST00000474896 LY86O95711 162 aa12.18□□□□□ -0.46
SRRT-209ENST00000474896 FUT3P21217 361 aa12.18□□□□□ -0.46
SRRT-209ENST00000474896 IL3RAP26951 378 aa12.18□□□□□ -0.46
SRRT-209ENST00000474896 PSMB8P28062 276 aa12.18□□□□□ -0.46
SRRT-209ENST00000474896 BLVRBP30043 206 aaPredicted RBP12.18□□□□□ -0.46
SRRT-209ENST00000474896 FHL3Q13643 280 aa12.18□□□□□ -0.46
SRRT-209ENST00000474896 OR8H1Q8NGG4 311 aa12.18□□□□□ -0.46
SRRT-209ENST00000474896 OR56B1Q8NGI3 324 aa12.18□□□□□ -0.46
SRRT-209ENST00000474896 CYYR1Q96J86 154 aa12.18□□□□□ -0.46
SRRT-209ENST00000474896 NEDD4LQ96PU5 975 aa12.18□□□□□ -0.46
SRRT-209ENST00000474896 ATG5Q9H1Y0 275 aa12.18□□□□□ -0.46
SRRT-209ENST00000474896 COMMD3Q9UBI1 195 aa12.18□□□□□ -0.46
SRRT-209ENST00000474896 PEX16Q9Y5Y5 336 aa12.18□□□□□ -0.46
SRRT-209ENST00000474896 SMAD5-AS1Q9Y6J3 95 aa12.18□□□□□ -0.46
SRRT-209ENST00000474896 MCRIP1C9JLW8 97 aa12.17□□□□□ -0.46
SRRT-209ENST00000474896 SLC31A2O15432 143 aa12.17□□□□□ -0.46
SRRT-209ENST00000474896 ORC5O43913 435 aa12.17□□□□□ -0.46
SRRT-209ENST00000474896 MT-ND4P03905 459 aa12.17□□□□□ -0.46
SRRT-209ENST00000474896 IGF1P05019 195 aa12.17□□□□□ -0.46
SRRT-209ENST00000474896 MOGAT2Q3SYC2 334 aa12.17□□□□□ -0.46
SRRT-209ENST00000474896 CASC10Q5T4H9 136 aa12.17□□□□□ -0.46
SRRT-209ENST00000474896 C6orf201Q7Z4U5 140 aa12.17□□□□□ -0.46
SRRT-209ENST00000474896 FAM71E2Q8N5Q1 922 aa12.17□□□□□ -0.46
SRRT-209ENST00000474896 SAMD12Q8N8I0 201 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms