RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 IFI27L2Q9H2X8 130 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 PLEKHF2Q9H8W4 249 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 PLSCR3Q9NRY6 295 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 MIOXQ9UGB7 285 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 RPUSD1Q9UJJ7 312 aaKnown RBP7.74□□□□□ -1.17
VPS52-216ENST00000471309 PSG11Q9UQ72 335 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 HSPB11Q9Y547 144 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 NBASA2RRP1 2371 aa7.74□□□□□ -1.17
VPS52-216ENST00000471309 FXYD6-FXYD2A0A087WZ82 144 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 PPIHO43447 177 aaKnown RBP7.73□□□□□ -1.17
VPS52-216ENST00000471309 LY6HO94772 140 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 MPC2O95563 127 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 SERPINE2P07093 398 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 PET100P0DJ07 73 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 RPA2P15927 270 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 OMGP23515 440 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 PSMB6P28072 239 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 GPR12P47775 334 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 TMEM33P57088 247 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 ESCO2Q56NI9 601 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 PRAMEF5Q5TYX0 476 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 C11orf87Q6NUJ2 197 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 TMEM65Q6PI78 240 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 ZNF66Q6ZN08 573 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 ZNF841Q6ZN19 808 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 TCTEX1D1Q8N7M0 179 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.73□□□□□ -1.17
VPS52-216ENST00000471309 ZNF439Q8NDP4 499 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 OR8B3Q8NGG8 313 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 RBPMSQ93062 196 aaKnown RBP7.73□□□□□ -1.17
VPS52-216ENST00000471309 RAB39BQ96DA2 213 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 NEIL1Q96FI4 390 aaPredicted RBP7.73□□□□□ -1.17
VPS52-216ENST00000471309 OR8B2Q96RD0 313 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 HSD17B10Q99714 261 aaKnown RBP7.73□□□□□ -1.17
VPS52-216ENST00000471309 SPIN2AQ99865 258 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 SPIN2BQ9BPZ2 258 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 FAM212BQ9NTI7 297 aaPredicted RBP7.73□□□□□ -1.17
VPS52-216ENST00000471309 SDHAF2Q9NX18 166 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 RNF150Q9ULK6 438 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 GAB2Q9UQC2 676 aa7.73□□□□□ -1.17
VPS52-216ENST00000471309 CFAP46Q8IYW2 2715 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 RELNP78509 3460 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 A0A087X0M5 115 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 A0A1B0GX30 115 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 CLEC18AA5D8T8 446 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 F5H0A9 414 aaPredicted RBP7.72□□□□□ -1.17
VPS52-216ENST00000471309 ARPC5O15511 151 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 RBP4P02753 201 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 LYL1P12980 280 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 CCL3L1P16619 93 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 C4BPBP20851 252 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 VDAC1P21796 283 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 DLX6P56179 175 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 ZNF345Q14585 488 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 LGALSLQ3ZCW2 172 aaPredicted RBP7.72□□□□□ -1.17
VPS52-216ENST00000471309 LRRC37A5PQ49AS3 106 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 NMSQ5H8A3 153 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 PRSS54Q6PEW0 395 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 C8orf31Q8N9H6 132 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 ZBTB8BQ8NAP8 495 aaPredicted RBP7.72□□□□□ -1.17
VPS52-216ENST00000471309 CLEC18CQ8NCF0 446 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 C8orf46Q8TAG6 207 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 THAP6Q8TBB0 222 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 ABHD14BQ96IU4 210 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 GON7Q9BXV9 100 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 SLA2Q9H6Q3 261 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 ZFP57Q9NU63 452 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 MBD2Q9UBB5 411 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 TNFSF18Q9UNG2 199 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 TENM4Q6N022 2769 aa7.72□□□□□ -1.17
VPS52-216ENST00000471309 SAA2-SAA4A0A096LPE2 208 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 A0A1W2PPH5 198 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 C17orf98A8MV24 154 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 L7N2F9 121 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 RGS13O14921 159 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 SLC31A2O15432 143 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 MMP23AO75900 390 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 CLDN1O95832 211 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 SAA2P0DJI9 122 aaPredicted RBP7.71□□□□□ -1.18
VPS52-216ENST00000471309 SLC25A6P12236 298 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 CXCL2P19875 107 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 NFYBP25208 207 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 GPR6P46095 362 aaPredicted RBP7.71□□□□□ -1.18
VPS52-216ENST00000471309 ZNF134P52741 427 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 RPL30P62888 115 aaKnown RBP7.71□□□□□ -1.18
VPS52-216ENST00000471309 IFITM2Q01629 132 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 RAB32Q13637 225 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 ZNF585BQ52M93 769 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 CT45A1Q5HYN5 189 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 UTF1Q5T230 341 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 WDR25Q64LD2 544 aaPredicted RBP7.71□□□□□ -1.18
VPS52-216ENST00000471309 BTNL3Q6UXE8 466 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 SLC25A48Q6ZT89 311 aaKnown RBP7.71□□□□□ -1.18
VPS52-216ENST00000471309 OR4D5Q8NGN0 318 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 CT45A3Q8NHU0 189 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 TCTEX1D2Q8WW35 142 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 LEAP2Q969E1 77 aa7.71□□□□□ -1.18
VPS52-216ENST00000471309 LSM10Q969L4 123 aaKnown RBP7.71□□□□□ -1.18
VPS52-216ENST00000471309 PATZ1Q9HBE1 687 aaKnown RBP7.71□□□□□ -1.18
VPS52-216ENST00000471309 GSKIPQ9P0R6 139 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms