RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 ARID1AO14497 2285 aa8.95□□□□□ -0.98
PKP4-206ENST00000452162 A0A0G2JRQ6 117 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 ZSCAN5BA6NJL1 495 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 NUDT19A8MXV4 375 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 C12orf77C9JDV5 145 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 HSPA12AO43301 675 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 PLAUP00749 431 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 IGHV3-13P01766 116 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 PSG2P11465 335 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 POLR2GP62487 172 aaKnown RBP eCLIP8.94□□□□□ -0.98
PKP4-206ENST00000452162 ID3Q02535 119 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 BSPH1Q075Z2 132 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 CXorf66Q5JRM2 361 aaPredicted RBP8.94□□□□□ -0.98
PKP4-206ENST00000452162 OR2Z1Q8NG97 314 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 OR1L1Q8NH94 360 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 MMP26Q9NRE1 261 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 METRNQ9UJH8 293 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 MAST4O15021 2626 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 RAI1Q7Z5J4 1906 aaPredicted RBP8.94□□□□□ -0.98
PKP4-206ENST00000452162 OOEPA6NGQ2 149 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 GLRXP35754 106 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 CEACAM6P40199 344 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 LPAR6P43657 344 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 EWSR1Q01844 656 aaKnown RBP eCLIP8.94□□□□□ -0.983e-7■■□□□ 13
PKP4-206ENST00000452162 NHLH2Q02577 135 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 COL10A1Q03692 680 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 AESQ08117 197 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 NCMAPQ5T1S8 102 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 OR2C3Q8N628 320 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 LRRC29Q8WV35 223 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 GINS3Q9BRX5 216 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 TOLLIPQ9H0E2 274 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 NGBQ9NPG2 151 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 KCNIP1Q9NZI2 227 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 SPEF1Q9Y4P9 236 aa8.94□□□□□ -0.98
PKP4-206ENST00000452162 BORCS7-ASMTA0A0B4J1R7 106 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 PIGBOS1A0A0B4J2F0 54 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 IGSF23A1L1A6 192 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 SSSCA1O60232 199 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 PITX3O75364 302 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 FBXO24O75426 580 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 IGKV1-39P01597 117 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 CRYAAP02489 173 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 IGKV1D-39P04432 117 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 OR8U9P0C7N5 309 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 SLC25A6P12236 298 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 MMP9P14780 707 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 EGR1P18146 543 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 PAX5Q02548 391 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 PXDC1Q5TGL8 231 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 IL34Q6ZMJ4 242 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 DRAM1Q8N682 238 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 OR10Z1Q8NGY1 313 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 OR8U1Q8NH10 309 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 GPR146Q96CH1 333 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 LURAP1Q96LR2 239 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 MS4A7Q9GZW8 240 aaPredicted RBP8.93□□□□□ -0.98
PKP4-206ENST00000452162 ESRP2Q9H6T0 727 aaKnown RBP8.93□□□□□ -0.98
PKP4-206ENST00000452162 KCNS2Q9ULS6 477 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 PPP1R3CQ9UQK1 317 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 IGLV3-9A0A075B6K5 115 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 FAM24AA6NFZ4 105 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 SRRM5B3KS81 715 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 MED6O75586 246 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 GOSR1O95249 250 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 SERPINE2P07093 398 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 PVALBP20472 110 aaPredicted RBP8.93□□□□□ -0.98
PKP4-206ENST00000452162 CFHR2P36980 270 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 KLF3P57682 345 aaPredicted RBP8.93□□□□□ -0.98
PKP4-206ENST00000452162 SSX8Q7RTT4 187 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 CD177Q8N6Q3 437 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 TMEM171Q8WVE6 324 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 MAGT1Q9H0U3 335 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 PLEKHF2Q9H8W4 249 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 LYRM2Q9NU23 88 aaPredicted RBP8.93□□□□□ -0.98
PKP4-206ENST00000452162 DUSP13Q9UII6 198 aa8.93□□□□□ -0.98
PKP4-206ENST00000452162 CHD3Q12873 2000 aaKnown RBP8.93□□□□□ -0.98
PKP4-206ENST00000452162 A0A1B0GU03 582 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 KIAA1324LA8MWY0 1029 aaPredicted RBP8.92□□□□□ -0.98
PKP4-206ENST00000452162 ABCD4O14678 606 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 TMEM50AO95807 157 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 HBZP02008 142 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 CD40P25942 277 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 PJVKQ0ZLH3 352 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 ZNF585BQ52M93 769 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 SPRNQ5BIV9 151 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 ADAM5Q6NVV9 412 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 FAM90A1Q86YD7 464 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 ODF3L1Q8IXM7 274 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 NEUROG1Q92886 237 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 LSM10Q969L4 123 aaKnown RBP8.92□□□□□ -0.98
PKP4-206ENST00000452162 GALMQ96C23 342 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 TMEM204Q9BSN7 226 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 SEBOXQ9HB31 216 aaPredicted RBP8.92□□□□□ -0.98
PKP4-206ENST00000452162 PARP11Q9NR21 331 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 LIN7CQ9NUP9 197 aaKnown RBP8.92□□□□□ -0.98
PKP4-206ENST00000452162 RNF115Q9Y4L5 304 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 RBM7Q9Y580 266 aaKnown RBP8.92□□□□□ -0.98
PKP4-206ENST00000452162 USF3Q68DE3 2245 aa8.92□□□□□ -0.98
PKP4-206ENST00000452162 MYO9AB2RTY4 2548 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms