RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 OR51M1Q9H341 326 aa14.26□□□□□ -0.13
TCOF1-206ENST00000445265 HES4Q9HCC6 221 aa14.26□□□□□ -0.13
TCOF1-206ENST00000445265 HEATR5AQ86XA9 2040 aa14.26□□□□□ -0.13
TCOF1-206ENST00000445265 MKRN2OSH3BPM6 223 aa14.26□□□□□ -0.13
TCOF1-206ENST00000445265 ZNHIT1O43257 154 aa14.26□□□□□ -0.13
TCOF1-206ENST00000445265 NDUFB3O43676 98 aa14.26□□□□□ -0.13
TCOF1-206ENST00000445265 SUMO1P63165 101 aaKnown RBP14.26□□□□□ -0.13
TCOF1-206ENST00000445265 TRIP6Q15654 476 aaKnown RBP14.26□□□□□ -0.13
TCOF1-206ENST00000445265 PSMG3Q9BT73 122 aaPredicted RBP14.26□□□□□ -0.13
TCOF1-206ENST00000445265 MSL2Q9HCI7 577 aa14.26□□□□□ -0.13
TCOF1-206ENST00000445265 TANC1Q9C0D5 1861 aa14.26□□□□□ -0.13
TCOF1-206ENST00000445265 LRRC10Q5BKY1 277 aa14.26□□□□□ -0.13
TCOF1-206ENST00000445265 ZNF506Q5JVG8 444 aa14.26□□□□□ -0.13
TCOF1-206ENST00000445265 FUT9Q9Y231 359 aa14.26□□□□□ -0.13
TCOF1-206ENST00000445265 J3QW42 95 aa14.26□□□□□ -0.13
TCOF1-206ENST00000445265 AGFG2O95081 481 aa14.26□□□□□ -0.13
TCOF1-206ENST00000445265 CD1BP29016 333 aa14.26□□□□□ -0.13
TCOF1-206ENST00000445265 STUMQ69YW2 141 aa14.26□□□□□ -0.13
TCOF1-206ENST00000445265 C16orf82Q7Z2V1 217 aa14.26□□□□□ -0.13
TCOF1-206ENST00000445265 MPDU1O75352 247 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 RPEL1Q2QD12 228 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 PRR27Q6MZM9 219 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 WDR73Q6P4I2 378 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 KLHDC1Q8N7A1 406 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 OR5P3Q8WZ94 311 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 VAMP8Q9BV40 100 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 TECRQ9NZ01 308 aaKnown RBP14.25□□□□□ -0.13
TCOF1-206ENST00000445265 ZMAT5Q9UDW3 170 aaKnown RBP14.25□□□□□ -0.13
TCOF1-206ENST00000445265 CACNA1EQ15878 2313 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 HSBP1O75506 76 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 CXorf1O96002 111 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 HPRT1P00492 218 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 PGA5P0DJD9 388 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 B2MP61769 119 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 COX19Q49B96 90 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 OR52L2PQ8NGH6 319 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 MESP1Q9BRJ9 268 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 REPIN1Q9BWE0 567 aaKnown RBP14.25□□□□□ -0.13
TCOF1-206ENST00000445265 RBKSQ9H477 322 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 TUBA4BQ9H853 241 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 CHEK1O14757 476 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 HFEQ30201 348 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 FAM214BQ7L5A3 538 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 SUPT4H1P63272 117 aaKnown RBP14.25□□□□□ -0.13
TCOF1-206ENST00000445265 QRFPP83859 136 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 SSMEM1Q8WWF3 244 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 TXNDC17Q9BRA2 123 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 OR1A1Q9P1Q5 309 aa14.25□□□□□ -0.13
TCOF1-206ENST00000445265 NPY1RP25929 384 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 SRSF3P84103 164 aaKnown RBP14.24□□□□□ -0.13
TCOF1-206ENST00000445265 TNFRSF9Q07011 255 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 FAM117AQ9C073 453 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 DOK5Q9P104 306 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 CLN5O75503 358 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 CT45A10P0DMU9 189 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 HOXB1P14653 301 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-206ENST00000445265 ARL3P36405 182 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 CDX1P47902 265 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-206ENST00000445265 GLIPR1P48060 266 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 PKIAP61925 76 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 GNB1P62873 340 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 RNF2Q99496 336 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 ZNF552Q9H707 407 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-206ENST00000445265 PRNDQ9UKY0 176 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 UMODP07911 640 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 PRDX2P32119 198 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 COL10A1Q03692 680 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 LILRB1Q8NHL6 650 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-206ENST00000445265 TMEM56-RWDD3S4R434 201 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 COL4A4P53420 1690 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-206ENST00000445265 MPDZO75970 2070 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 SRSF10O75494 262 aaKnown RBP14.24□□□□□ -0.13
TCOF1-206ENST00000445265 CRISP2P16562 243 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 HES1Q14469 280 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 CDCP2Q5VXM1 449 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 MOGAT3Q86VF5 341 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 C18orf12Q96KH6 178 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 PARD6AQ9NPB6 346 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 CYTL1Q9NRR1 136 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 WIPI2Q9Y4P8 454 aa14.24□□□□□ -0.13
TCOF1-206ENST00000445265 OR1L1Q8NH94 360 aa14.23□□□□□ -0.13
TCOF1-206ENST00000445265 HELZP42694 1942 aaKnown RBP14.23□□□□□ -0.13
TCOF1-206ENST00000445265 IGKV1D-8A0A087WSZ0 117 aa14.23□□□□□ -0.13
TCOF1-206ENST00000445265 KIAA1324LA8MWY0 1029 aaPredicted RBP14.23□□□□□ -0.13
TCOF1-206ENST00000445265 MGST3O14880 152 aa14.23□□□□□ -0.13
TCOF1-206ENST00000445265 RAB29O14966 203 aa14.23□□□□□ -0.13
TCOF1-206ENST00000445265 CD82P27701 267 aa14.23□□□□□ -0.13
TCOF1-206ENST00000445265 TEPPQ6URK8 271 aa14.23□□□□□ -0.13
TCOF1-206ENST00000445265 TMEM108Q6UXF1 575 aa14.23□□□□□ -0.13
TCOF1-206ENST00000445265 LRTM2Q8N967 370 aa14.23□□□□□ -0.13
TCOF1-206ENST00000445265 VSTM2AQ8TAG5 236 aa14.23□□□□□ -0.13
TCOF1-206ENST00000445265 TPPP3Q9BW30 176 aa14.23□□□□□ -0.13
TCOF1-206ENST00000445265 MRPS18CQ9Y3D5 142 aaKnown RBP14.23□□□□□ -0.13
TCOF1-206ENST00000445265 OPRK1P41145 380 aa14.23□□□□□ -0.13
TCOF1-206ENST00000445265 SPEM2Q0P670 501 aa14.23□□□□□ -0.13
TCOF1-206ENST00000445265 OR4P4Q8NGL7 312 aa14.23□□□□□ -0.13
TCOF1-206ENST00000445265 RPRMQ9NS64 109 aa14.23□□□□□ -0.13
TCOF1-206ENST00000445265 SEMA5BQ9P283 1151 aa14.23□□□□□ -0.13
TCOF1-206ENST00000445265 LGALS4P56470 323 aa14.22□□□□□ -0.13
TCOF1-206ENST00000445265 SPCS3P61009 180 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms