RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 CFHR2P36980 270 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 RPL30P62888 115 aaKnown RBP8.72□□□□□ -1.01
CPNE1-218ENST00000439806 NKX6-1P78426 367 aaPredicted RBP8.72□□□□□ -1.01
CPNE1-218ENST00000439806 RUNX1Q01196 453 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 PAX5Q02548 391 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 LTC4SQ16873 150 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 AKIRIN2Q53H80 203 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 TMEM88Q6PEY1 159 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 THNSL2Q86YJ6 484 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 CBLN2Q8IUK8 224 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 FGFRL1Q8N441 504 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 RFESDQ8TAC1 157 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 C5orf30Q96GV9 206 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 HSD17B10Q99714 261 aaKnown RBP8.72□□□□□ -1.01
CPNE1-218ENST00000439806 RBKSQ9H477 322 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 RAB9BQ9NP90 201 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 KCNJ16Q9NPI9 418 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 COA4Q9NYJ1 87 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 GNG12Q9UBI6 72 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 JPT1Q9UK76 154 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 PSG11Q9UQ72 335 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 LAMP3Q9UQV4 416 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 FBXO7Q9Y3I1 522 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 RFNGQ9Y644 331 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 TANC2Q9HCD6 1990 aa8.72□□□□□ -1.01
CPNE1-218ENST00000439806 IGLV3-9A0A075B6K5 115 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 IGKV1D-17A0A075B6S4 117 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 ODAMA1E959 279 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 C17orf98A8MV24 154 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 DEFB108AA8MXU0 73 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 FAM157AC9JC47 383 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 C15orf65H3BRN8 121 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 H7C2Y5 167 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 ZNF737O75373 536 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 S1PR2O95136 353 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 METTL15P1P0C7V9 234 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 GZMHP20718 246 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 TNFSF4P23510 183 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 GPR12P47775 334 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 EDDM3BP56851 147 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 HTD2P86397 168 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 TNFAIP6P98066 277 aaPredicted RBP8.71□□□□□ -1.02
CPNE1-218ENST00000439806 TLE4Q04727 773 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 FOXC1Q12948 553 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 EIF4EBP1Q13541 118 aaPredicted RBP8.71□□□□□ -1.02
CPNE1-218ENST00000439806 SPANXN5Q5MJ07 72 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 FAM53AQ6NSI3 398 aaPredicted RBP8.71□□□□□ -1.02
CPNE1-218ENST00000439806 H2BFWTQ7Z2G1 175 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 MRGPRGQ86SM5 289 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 ZNF295-AS1Q8N0V1 137 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 GCSAMQ8N6F7 178 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 ZNF525Q8N782 197 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 FAM216AQ8WUB2 273 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 DCTN5Q9BTE1 182 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 ABHD14AQ9BUJ0 271 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.71□□□□□ -1.02
CPNE1-218ENST00000439806 TP53TG5Q9Y2B4 290 aa8.71□□□□□ -1.02
CPNE1-218ENST00000439806 A0A0C4DFX4 3053 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 A8MXE2 369 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 M0R036 132 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 GPR37O15354 613 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 RAMP3O60896 148 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 CLDN14O95500 239 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 KRASP01116 189 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 BMP5P22003 454 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 UBE2KP61086 200 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 TNFRSF9Q07011 255 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 SLC38A11Q08AI6 406 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 FAM27E3Q08E93 113 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 FAM122CQ6P4D5 195 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 GFRALQ6UXV0 394 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 KDF1Q8NAX2 398 aaPredicted RBP8.7□□□□□ -1.02
CPNE1-218ENST00000439806 PSMG3Q9BT73 122 aaPredicted RBP8.7□□□□□ -1.02
CPNE1-218ENST00000439806 LRFN3Q9BTN0 628 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 SCRT1Q9BWW7 348 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 MRPL37Q9BZE1 423 aaKnown RBP8.7□□□□□ -1.02
CPNE1-218ENST00000439806 SMDT1Q9H4I9 107 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 RPS10P5Q9NQ39 176 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 SMCO4Q9NRQ5 59 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 OR6C3Q9NZP0 311 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 KIAA1456Q9P272 454 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 RNF7Q9UBF6 113 aa8.7□□□□□ -1.02
CPNE1-218ENST00000439806 URB1O60287 2271 aaKnown RBP8.69□□□□□ -1.02
CPNE1-218ENST00000439806 UBE2L5PA0A1B0GUS4 154 aa8.69□□□□□ -1.02
CPNE1-218ENST00000439806 MEX3AA1L020 520 aaKnown RBP8.69□□□□□ -1.02
CPNE1-218ENST00000439806 RBFOX3A6NFN3 312 aa8.69□□□□□ -1.02
CPNE1-218ENST00000439806 LRRC30A6NM36 301 aa8.69□□□□□ -1.02
CPNE1-218ENST00000439806 CEBPZOSA8MTT3 80 aa8.69□□□□□ -1.02
CPNE1-218ENST00000439806 YPEL1O60688 119 aa8.69□□□□□ -1.02
CPNE1-218ENST00000439806 RBMXL2O75526 392 aaKnown RBP8.69□□□□□ -1.02
CPNE1-218ENST00000439806 IGHV1-46P01743 117 aa8.69□□□□□ -1.02
CPNE1-218ENST00000439806 OR8U8P0C7N1 319 aa8.69□□□□□ -1.02
CPNE1-218ENST00000439806 OR13C7P0DN81 318 aa8.69□□□□□ -1.02
CPNE1-218ENST00000439806 IRF2P14316 349 aa8.69□□□□□ -1.02
CPNE1-218ENST00000439806 NFYBP25208 207 aa8.69□□□□□ -1.02
CPNE1-218ENST00000439806 CD40P25942 277 aa8.69□□□□□ -1.02
CPNE1-218ENST00000439806 GATA4P43694 442 aa8.69□□□□□ -1.02
CPNE1-218ENST00000439806 FLI1Q01543 452 aaPredicted RBP8.69□□□□□ -1.02
CPNE1-218ENST00000439806 ATP6V1FQ16864 119 aa8.69□□□□□ -1.02
CPNE1-218ENST00000439806 LRRC75BQ2VPJ9 315 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms