RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 SERPINE2P07093 398 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 DANCRP0C864 163 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 PET100P0DJ07 73 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 RPS2P15880 293 aaKnown RBP3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 RPA2P15927 270 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 NDUFB7P17568 137 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 PSMB6P28072 239 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 GNRHRP30968 328 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 NUP62P37198 522 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 RAB7AP51149 207 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 EDDM3BP56851 147 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 H2BFSP57053 126 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 TMEM33P57088 247 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 SUPT4H1P63272 117 aaKnown RBP3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 EDDM3AQ14507 147 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 TMEM187Q14656 261 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 SLC9A3R2Q15599 337 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 ANKRD55Q3KP44 614 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 PHLDA2Q53GA4 152 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 ESCO2Q56NI9 601 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 TMEM65Q6PI78 240 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 MEX3BQ6ZN04 569 aaKnown RBP3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 DTX2Q86UW9 622 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 ZCCHC24Q8N2G6 241 aaKnown RBP3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 ZNF843Q8N446 348 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 PRR18Q8N4B5 295 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 ZNRF1Q8ND25 227 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 OR13A1Q8NGR1 328 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 OR1L1Q8NH94 360 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 THAP6Q8TBB0 222 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 MRGPRDQ8TDS7 321 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 IL22RA2Q969J5 263 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 TMEM230Q96A57 120 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 RAB39BQ96DA2 213 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 CYYR1Q96J86 154 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 C2orf50Q96LR7 162 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 TMEM56Q96MV1 263 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 CCL13Q99616 98 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 SPIN2AQ99865 258 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 SPIN2BQ9BPZ2 258 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 PDCD10Q9BUL8 212 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 GAL3ST2Q9H3Q3 398 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 FAM212BQ9NTI7 297 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 LIN7CQ9NUP9 197 aaKnown RBP3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 TAS2R3Q9NYW6 316 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 CALYQ9NYX4 217 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 PIPOXQ9P0Z9 390 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 SLC25A10Q9UBX3 287 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 CLN8Q9UBY8 286 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 MIOXQ9UGB7 285 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 JPT1Q9UK76 154 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 TMED3Q9Y3Q3 217 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 LINC00312Q9Y6C7 94 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 TMEM56-RWDD3S4R434 201 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 TENM4Q6N022 2769 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 COL12A1Q99715 3063 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 USP9YO00507 2555 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 CELSR2Q9HCU4 2923 aa3.29□□□□□ -1.88
HMGB1P37-201ENST00000439613 ARID1AO14497 2285 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 ASH1LQ9NR48 2969 aaKnown RBP3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 IGKV1D-13A0A0B4J2D9 117 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 A0A0D9SG52 128 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 hCG_1809904A0A1W2PP81 198 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 A0A1W2PPE2 198 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 A0A1W2PR64 198 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 A0A1W2PRV1 198 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 H0Y980 276 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 C15orf65H3BRN8 121 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 HSD17B6O14756 317 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 PHF1O43189 567 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 ADAM20O43506 726 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 YPEL1O60688 119 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 SIX6O95475 246 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 CDS2O95674 445 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 RLN2P04090 185 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 TFF1P04155 84 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 HOXB5P09067 269 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 OR5AC1P0C628 307 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 OR8U9P0C7N5 309 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 CGB3P0DN86 165 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 CGB7P0DN87 165 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 IGKV1-13P0DP09 117 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 SLC25A4P12235 298 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 DAOP14920 347 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 COL8A2P25067 703 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 F2RP25116 425 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 UCP1P25874 307 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 SSTR5P35346 364 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 KIR2DS2P43631 304 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 EFNA4P52798 201 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 RPL31P62899 125 aaKnown RBP3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 CATR1Q13166 79 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 SMCO1Q147U7 214 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 C2orf68Q2NKX9 166 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 Q3ZCU0 254 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 TMEM155Q4W5P6 130 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 FAM201AQ5SY85 155 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 DCAF12L2Q5VW00 463 aa3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 THOC7Q6I9Y2 204 aaKnown RBP3.28□□□□□ -1.88
HMGB1P37-201ENST00000439613 C11orf71Q6IPW1 123 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms